| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673885
Identifier: 21673885
GI number: 21673885
Start: 996064
End: 996930
Strand: Direct
Name: 21673885
Synonym: CT1059
Alternate gene names: NA
Gene position: 996064-996930 (Clockwise)
Preceding gene: 21673884
Following gene: 21673886
Centisome position: 46.22
GC content: 58.59
Gene sequence:
>867_bases GTGCTCGTCGGTACTGAAATTCTGGGAATTGCTTGTGGCAACGCTGGAGGAGGTGCCAGAGCCGTGAAGACGCCCTACAG CTACAACACCATTTCGGATTTTCTCTTGTCGCAACCGCTGACGGTTGATGTGGAGGTTGACGACGAGACTGCCGGGTGTT TTCCGCTCAAATGCATCGAGCTCGACGCGACCGTGCTCTATGTCGGAATGCGCAATTTTGCGCGGCTTACGCTCGATCTT TCGCCGACGGAGATTCTGATCTACCTCAACATGTTTCTCGTCTGGATGCGCGACTCGCTCGCGGCGGAGCGCTTCTGCGT GGTCGAGCGGTTTCTCGACAGCTCGATCGTGCTGCTTTTTTCGAAAAAGTTCGGTTCGGAAGAGCCGTTTTTCGACGCGA TTCGCGCCGCGCGATGGATGGGAGAGCACGATGAGCTGCTCTTCGCGCCGGAGATGGGCATTGCCAGCGGGCGTGTTTCG GTGGGATTCGCTGGCACGCCGAAGGAGTTCACCGGCTCGGTCTTCGGGCGTCCGGTGCTGCTCGCCGCAGCGTGCGCGAA GATGAGGCCACAGGACGAGGCGATGGCGTCGTGCATCACTTTTCCGGAGGAGGAGTGGCGGGGGCGCTCGTTCGAAGAGC TGTTTCCGCCGCTAGAGTTCGACCACCCGGAGTGTGGCCGCGTGCGCCAGCCATCGACCTGGAGGCTCGGCGAGCCTCGA AGCGTCGATTTTGCGTCGCATGGCCGGATTGACCTGCGGGATGTTGGTAACTTCGTGCACTGGACATCAAAGATTACGGC AAAGGAAAAGGCCCGTGAGTGGTTTGCCCAGATCAAGGCGAAAGGATTTTACAAGTATCAAAAATAA
Upstream 100 bases:
>100_bases GTCTGGAGTGTGGCATCATCGGCGCAAACAATCCGCAGCTTGACATGATTTCGTTCGGCCCGACCATCCGCCATCCGCAT TCGCCGGACGAAAAGGTTGA
Downstream 100 bases:
>100_bases AAAGAGTTATGCCGAAAACAATCATGCTGCTGGGCAGCGGGGAGCTGGGCAAAGAGTTCGTGATTGCCGTCAAGCGGCTG GGGCAGCGGGTGGTCGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MLVGTEILGIACGNAGGGARAVKTPYSYNTISDFLLSQPLTVDVEVDDETAGCFPLKCIELDATVLYVGMRNFARLTLDL SPTEILIYLNMFLVWMRDSLAAERFCVVERFLDSSIVLLFSKKFGSEEPFFDAIRAARWMGEHDELLFAPEMGIASGRVS VGFAGTPKEFTGSVFGRPVLLAAACAKMRPQDEAMASCITFPEEEWRGRSFEELFPPLEFDHPECGRVRQPSTWRLGEPR SVDFASHGRIDLRDVGNFVHWTSKITAKEKAREWFAQIKAKGFYKYQK
Sequences:
>Translated_288_residues MLVGTEILGIACGNAGGGARAVKTPYSYNTISDFLLSQPLTVDVEVDDETAGCFPLKCIELDATVLYVGMRNFARLTLDL SPTEILIYLNMFLVWMRDSLAAERFCVVERFLDSSIVLLFSKKFGSEEPFFDAIRAARWMGEHDELLFAPEMGIASGRVS VGFAGTPKEFTGSVFGRPVLLAAACAKMRPQDEAMASCITFPEEEWRGRSFEELFPPLEFDHPECGRVRQPSTWRLGEPR SVDFASHGRIDLRDVGNFVHWTSKITAKEKAREWFAQIKAKGFYKYQK >Mature_288_residues MLVGTEILGIACGNAGGGARAVKTPYSYNTISDFLLSQPLTVDVEVDDETAGCFPLKCIELDATVLYVGMRNFARLTLDL SPTEILIYLNMFLVWMRDSLAAERFCVVERFLDSSIVLLFSKKFGSEEPFFDAIRAARWMGEHDELLFAPEMGIASGRVS VGFAGTPKEFTGSVFGRPVLLAAACAKMRPQDEAMASCITFPEEEWRGRSFEELFPPLEFDHPECGRVRQPSTWRLGEPR SVDFASHGRIDLRDVGNFVHWTSKITAKEKAREWFAQIKAKGFYKYQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32338; Mature: 32338
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVGTEILGIACGNAGGGARAVKTPYSYNTISDFLLSQPLTVDVEVDDETAGCFPLKCIE CCCCCEEEEEEECCCCCCCCEEECCCCCHHHHHHHHCCCCEEEEEECCCCCCEEEEEEEE LDATVLYVGMRNFARLTLDLSPTEILIYLNMFLVWMRDSLAAERFCVVERFLDSSIVLLF ECCEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE SKKFGSEEPFFDAIRAARWMGEHDELLFAPEMGIASGRVSVGFAGTPKEFTGSVFGRPVL ECCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEECCCCHHHHHHHCCCHHH LAAACAKMRPQDEAMASCITFPEEEWRGRSFEELFPPLEFDHPECGRVRQPSTWRLGEPR HHHHHHHCCCCHHHHHHHHCCCHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC SVDFASHGRIDLRDVGNFVHWTSKITAKEKAREWFAQIKAKGFYKYQK CCCCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC >Mature Secondary Structure MLVGTEILGIACGNAGGGARAVKTPYSYNTISDFLLSQPLTVDVEVDDETAGCFPLKCIE CCCCCEEEEEEECCCCCCCCEEECCCCCHHHHHHHHCCCCEEEEEECCCCCCEEEEEEEE LDATVLYVGMRNFARLTLDLSPTEILIYLNMFLVWMRDSLAAERFCVVERFLDSSIVLLF ECCEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE SKKFGSEEPFFDAIRAARWMGEHDELLFAPEMGIASGRVSVGFAGTPKEFTGSVFGRPVL ECCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEECCCCHHHHHHHCCCHHH LAAACAKMRPQDEAMASCITFPEEEWRGRSFEELFPPLEFDHPECGRVRQPSTWRLGEPR HHHHHHHCCCCHHHHHHHHCCCHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC SVDFASHGRIDLRDVGNFVHWTSKITAKEKAREWFAQIKAKGFYKYQK CCCCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA