Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21673800

Identifier: 21673800

GI number: 21673800

Start: 918120

End: 918740

Strand: Reverse

Name: 21673800

Synonym: CT0972

Alternate gene names: NA

Gene position: 918740-918120 (Counterclockwise)

Preceding gene: 21673801

Following gene: 21673790

Centisome position: 42.63

GC content: 49.6

Gene sequence:

>621_bases
ATGAAACACTCCATATCGACCCGCAAGGAATTGACCATCCTCAAGCTTGAAGAGCCAATTTTCGATGTCCGTTACGCAGA
CTGTTTCAAGGCGACTATCGACAGCATGATCAGCACCGGTACCAGTAAAAACATTATTATCGATTTTTCGCAGGTCAAGG
CTATCGATTCTTCAGGCATAGGCTCGATGCTCCTGGCCCATCAGCTCGCCAACAGCTCTGACGGGCTTGCCATTTTCGTC
TCGCTCTGCCAGCAGATAAAAGACCTGCTTAAACTGGCCAATCTCGACAAGCAACTCTACATCTTCTCGTCGATCAATGA
AGTCATGACGCTCATCGAGCCGGCATTGAAGGGTAAACGCGGCAGCCGGTCGCGGCAGCAGCCGGTTCAGGATGAGAGTA
TTGACGAAATCGGTGACGAACTTGAAATCCCTGACGAGGCCTTTGAAAGCGAAGCATACTGCGAAATCGAAGACGAAGCT
GAAGCGATTGATGAACCTGAAGCGATTGATGAAAACGAAAAGCCCCACCAGAAAAAAAATCCATCCGCAACGGCTCCCAC
CAGAAAACGAGGCCGCCCAAAAAAGAATCCCGAGGCCGGCAAAACACCATTGAAAAGTTAA

Upstream 100 bases:

>100_bases
CGCATTCATCTTTCAACCATCCTTCAATGAATGCGGAGCCAAAAAGGTAGCACAAGTGCCTTTGATAGAATAAGTTACCG
TATTTCTGCTGGAGTTTTTT

Downstream 100 bases:

>100_bases
AACTCAAAGAACAGCGCCCATCCATCACTCTTGACATGATCTTGCCCTATCGGGCATCTTTTTGACATTTCGTCGTGCAT
ACACTATTTTTTAAAGCAGT

Product: anti-anti-sigma factor, putative

Products: NA

Alternate protein names: Anti-Anti-Sigma Factor

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MKHSISTRKELTILKLEEPIFDVRYADCFKATIDSMISTGTSKNIIIDFSQVKAIDSSGIGSMLLAHQLANSSDGLAIFV
SLCQQIKDLLKLANLDKQLYIFSSINEVMTLIEPALKGKRGSRSRQQPVQDESIDEIGDELEIPDEAFESEAYCEIEDEA
EAIDEPEAIDENEKPHQKKNPSATAPTRKRGRPKKNPEAGKTPLKS

Sequences:

>Translated_206_residues
MKHSISTRKELTILKLEEPIFDVRYADCFKATIDSMISTGTSKNIIIDFSQVKAIDSSGIGSMLLAHQLANSSDGLAIFV
SLCQQIKDLLKLANLDKQLYIFSSINEVMTLIEPALKGKRGSRSRQQPVQDESIDEIGDELEIPDEAFESEAYCEIEDEA
EAIDEPEAIDENEKPHQKKNPSATAPTRKRGRPKKNPEAGKTPLKS
>Mature_206_residues
MKHSISTRKELTILKLEEPIFDVRYADCFKATIDSMISTGTSKNIIIDFSQVKAIDSSGIGSMLLAHQLANSSDGLAIFV
SLCQQIKDLLKLANLDKQLYIFSSINEVMTLIEPALKGKRGSRSRQQPVQDESIDEIGDELEIPDEAFESEAYCEIEDEA
EAIDEPEAIDENEKPHQKKNPSATAPTRKRGRPKKNPEAGKTPLKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22877; Mature: 22877

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHSISTRKELTILKLEEPIFDVRYADCFKATIDSMISTGTSKNIIIDFSQVKAIDSSGI
CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHCCCCH
GSMLLAHQLANSSDGLAIFVSLCQQIKDLLKLANLDKQLYIFSSINEVMTLIEPALKGKR
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC
GSRSRQQPVQDESIDEIGDELEIPDEAFESEAYCEIEDEAEAIDEPEAIDENEKPHQKKN
CCCCCCCCCCCCCHHHHCCCCCCCHHHHCCCCCEEECCHHHHCCCCCCCCCCCCCCCCCC
PSATAPTRKRGRPKKNPEAGKTPLKS
CCCCCCHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKHSISTRKELTILKLEEPIFDVRYADCFKATIDSMISTGTSKNIIIDFSQVKAIDSSGI
CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHCCCCH
GSMLLAHQLANSSDGLAIFVSLCQQIKDLLKLANLDKQLYIFSSINEVMTLIEPALKGKR
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC
GSRSRQQPVQDESIDEIGDELEIPDEAFESEAYCEIEDEAEAIDEPEAIDENEKPHQKKN
CCCCCCCCCCCCCHHHHCCCCCCCHHHHCCCCCEEECCHHHHCCCCCCCCCCCCCCCCCC
PSATAPTRKRGRPKKNPEAGKTPLKS
CCCCCCHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA