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The map label for this gene is yvrB [H]

Identifier: 21673770

GI number: 21673770

Start: 890209

End: 891255

Strand: Direct

Name: yvrB [H]

Synonym: CT0942

Alternate gene names: 21673770

Gene position: 890209-891255 (Clockwise)

Preceding gene: 21673769

Following gene: 21673771

Centisome position: 41.31

GC content: 64.09

Gene sequence:

>1047_bases
GTGAGCCTGACGCGCTTACATAAAACGAATGGCGGTGACGGCTGCCGCCCGATGATCGTCAAAGGTTCGCCGGTCAATCG
CCGACGGGCGCTGTTGCTGGCGGCGGCCATTCCGCTGCTGCTCGGTCTGTCGCTGCTGCTTGGTCCGTCCGGCATCGGCC
TGCCCGACACGTCGTCGATTTCGGGCCGCGCGATCATCGACCTGCGGCTCGGGCGTTTCGTGATGGGAATGCTGGTCGGT
GCGGCGCTCTCGACCTCCGGTACAGTGTTCCAGGCGATTCTGCGCAATCCGCTTGCCGAGCCTTACGTGCTTGGCGTGAG
CGGCGGTGCGGGACTTGGCGCGGCGTTGAGCATCCTCGTCGGTGGAGGTATTCTCGGTGCAGCGGGTTTGCCGGTCACGG
CGTTCTTCTTCGCCGTTATCACCCTTTTCGCGGTCTATGCCATCGCGGCTCAGGGCGGCGGTATGCCGTCGGTGTACAGC
CTGATCCTGAGCGGCGTGATCGTCAGCGCGATCTGTTCGAGCGTCATCATGTTTCTCGTCTCGACGGCCAACGTCGAGGG
GATGCACACCGTGATGTGGTGGATGCTCGGCAACCTCCAGCCCTCCTCGTGGGGCAATCAGTTCATCGCGCTGCTCTTCA
TCGCAGGCGCATCGGTGGCGCTATGGCTGCTCGCTCCGGCGCTGAACGTGTTGACGCTGGGGCGCGAAATGGCTCACTAT
CAGGGGCTCAATGCCGGAACGGTGACGGTGTCGAGCCTGCTGCTTGCCACGCTGCTGGCGGCTACGGCGGTCTCGATGGG
GGGGATGATCGGCTTCGTGGGCCTCATCGTGCCGCACGTCATGCGGGCGATCTTCGGCCCCGACCACCGCTGGCTCGTGC
CCGCCTCGGCCTTCGGTGGCGGGGCGTTTCTCGTGCTCTGCGATGTCATCGCGTGCGTTGTCATGCCTCCCATTGAAATT
CCCGTTGGAGTGGTGACGGCGCTGGCGGGCGGCCCGTTTTTCCTCATCGTGCTCCGAAAAAGGATGAAGTATGCCTGGAA
TGACTGA

Upstream 100 bases:

>100_bases
CGCCGCAGGCGTTGATCGACGTGGCCGACACCGTGACAGAGATGAAGATGATCAAGCACGGCTACGAGCAGGGATTGCTC
TCACAGGCTGGCGTGGAGGA

Downstream 100 bases:

>100_bases
GCTGGGAGCGCCTGCGCTTGCGTTTCGAGGCGTCACCGCCGGGTACAAGGGGCGCACGGTGCTGCGCGATGTCGATTTTG
GGATCGCCGAGGGGGAGTTC

Product: FecCD transport family protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MSLTRLHKTNGGDGCRPMIVKGSPVNRRRALLLAAAIPLLLGLSLLLGPSGIGLPDTSSISGRAIIDLRLGRFVMGMLVG
AALSTSGTVFQAILRNPLAEPYVLGVSGGAGLGAALSILVGGGILGAAGLPVTAFFFAVITLFAVYAIAAQGGGMPSVYS
LILSGVIVSAICSSVIMFLVSTANVEGMHTVMWWMLGNLQPSSWGNQFIALLFIAGASVALWLLAPALNVLTLGREMAHY
QGLNAGTVTVSSLLLATLLAATAVSMGGMIGFVGLIVPHVMRAIFGPDHRWLVPASAFGGGAFLVLCDVIACVVMPPIEI
PVGVVTALAGGPFFLIVLRKRMKYAWND

Sequences:

>Translated_348_residues
MSLTRLHKTNGGDGCRPMIVKGSPVNRRRALLLAAAIPLLLGLSLLLGPSGIGLPDTSSISGRAIIDLRLGRFVMGMLVG
AALSTSGTVFQAILRNPLAEPYVLGVSGGAGLGAALSILVGGGILGAAGLPVTAFFFAVITLFAVYAIAAQGGGMPSVYS
LILSGVIVSAICSSVIMFLVSTANVEGMHTVMWWMLGNLQPSSWGNQFIALLFIAGASVALWLLAPALNVLTLGREMAHY
QGLNAGTVTVSSLLLATLLAATAVSMGGMIGFVGLIVPHVMRAIFGPDHRWLVPASAFGGGAFLVLCDVIACVVMPPIEI
PVGVVTALAGGPFFLIVLRKRMKYAWND
>Mature_347_residues
SLTRLHKTNGGDGCRPMIVKGSPVNRRRALLLAAAIPLLLGLSLLLGPSGIGLPDTSSISGRAIIDLRLGRFVMGMLVGA
ALSTSGTVFQAILRNPLAEPYVLGVSGGAGLGAALSILVGGGILGAAGLPVTAFFFAVITLFAVYAIAAQGGGMPSVYSL
ILSGVIVSAICSSVIMFLVSTANVEGMHTVMWWMLGNLQPSSWGNQFIALLFIAGASVALWLLAPALNVLTLGREMAHYQ
GLNAGTVTVSSLLLATLLAATAVSMGGMIGFVGLIVPHVMRAIFGPDHRWLVPASAFGGGAFLVLCDVIACVVMPPIEIP
VGVVTALAGGPFFLIVLRKRMKYAWND

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=280, Percent_Identity=35, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1788004, Length=278, Percent_Identity=34.1726618705036, Blast_Score=118, Evalue=5e-28,
Organism=Escherichia coli, GI1786805, Length=284, Percent_Identity=32.3943661971831, Blast_Score=104, Evalue=9e-24,
Organism=Escherichia coli, GI1790741, Length=291, Percent_Identity=30.5841924398625, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1786804, Length=284, Percent_Identity=30.6338028169014, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1786347, Length=294, Percent_Identity=30.2721088435374, Blast_Score=79, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 35864; Mature: 35732

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTRLHKTNGGDGCRPMIVKGSPVNRRRALLLAAAIPLLLGLSLLLGPSGIGLPDTSSI
CCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SGRAIIDLRLGRFVMGMLVGAALSTSGTVFQAILRNPLAEPYVLGVSGGAGLGAALSILV
CCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH
GGGILGAAGLPVTAFFFAVITLFAVYAIAAQGGGMPSVYSLILSGVIVSAICSSVIMFLV
CCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
STANVEGMHTVMWWMLGNLQPSSWGNQFIALLFIAGASVALWLLAPALNVLTLGREMAHY
HHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGLNAGTVTVSSLLLATLLAATAVSMGGMIGFVGLIVPHVMRAIFGPDHRWLVPASAFGG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCC
GAFLVLCDVIACVVMPPIEIPVGVVTALAGGPFFLIVLRKRMKYAWND
HHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLTRLHKTNGGDGCRPMIVKGSPVNRRRALLLAAAIPLLLGLSLLLGPSGIGLPDTSSI
CCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SGRAIIDLRLGRFVMGMLVGAALSTSGTVFQAILRNPLAEPYVLGVSGGAGLGAALSILV
CCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH
GGGILGAAGLPVTAFFFAVITLFAVYAIAAQGGGMPSVYSLILSGVIVSAICSSVIMFLV
CCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
STANVEGMHTVMWWMLGNLQPSSWGNQFIALLFIAGASVALWLLAPALNVLTLGREMAHY
HHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGLNAGTVTVSSLLLATLLAATAVSMGGMIGFVGLIVPHVMRAIFGPDHRWLVPASAFGG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCC
GAFLVLCDVIACVVMPPIEIPVGVVTALAGGPFFLIVLRKRMKYAWND
HHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]