| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is apsA
Identifier: 21673694
GI number: 21673694
Start: 821103
End: 823079
Strand: Direct
Name: apsA
Synonym: CT0865
Alternate gene names: NA
Gene position: 821103-823079 (Clockwise)
Preceding gene: 21673693
Following gene: 21673695
Centisome position: 38.1
GC content: 58.42
Gene sequence:
>1977_bases ATGGGAGTTGAAAAAAACGAATTCAAGTTTAGCCAGAAGCCCGAAGTTGTTTATGTGGATACGGATATTCTGCTGATCGG CGGTGGCATGGCTTGTTGCGGCGCGGCTTATGAAGCGGCCAAATGGGCTACCCCGAAAGGTCTGAGAATCACGATGGTTG ACAAGGCTGCCGTTGACAGAAGCGGTGCGGTCGCCATGGGTCTTTCCGCCATCAACACCTACTGCGGCGAGAACGATCCG GCCGATTACGTAAAATATGTGAGAGCCGACCTCATGGGCATCATTCGTGAGGATCTGGTCTATGATCTGGGTCGTCACGT TGACAACTCGGTTCATCTTTTTGAAGAGTGGGGTCTTCCAATCTGGAAGCGCGACGAAGATGGTTCGACCATGGATGGCG CGAAACCGGCTCCGAAACTCACCGAAGGCGGCAAACCGGTCCGTTCCGGCCGCTGGCAGATCATGATCAATGGCGAATCC TACAAGGTGATCGTCGCCGAGGCCGCCAAGAAAGCCCTCGAATACAACCGCAAGGAGACCGGCGTCGAGCAGAACCTCTA CGAGCGCGTCTTTATCAGCGAACTCATCCACGACAAGAACAATCCGAGCAAGGTCGCTGGCGCTATCGGCTTCAGCGTTC GCGAGCACAAAGCCTATGTGTTCACCGCCAAAACCATGCTGCTCGCCTGCGGCGGCGCTGTGAACGTCTACCGTCCGCGC TCGACCGCTGAAGGTCAGGGCCGTGCATGGTACCCGGTCTGGAACGCAGGCACCACCTACGCACTCGCCGCACAGGCCGG TTGCGAACTGGTGCTCATGGAGAACCGTTTCGTGCCCGCCCGCTTCAAGGACGGCTACGGCCCGGTCGGCGCATGGTTCC TGTTCTTCAAGTGCAAGGCAACCAACTCGCTCGGCGAGGACTACTGCGCCACCAACCTTGCGGCGGCCAACAAGGATTTC GGCAAGTACGCCGAAGATCCGCACAAGCTGACCACCGCCATGAGGAACCATATGATGATGATCGACATGAAGGCCGGCAA AGGCCCGATCCTCATGAGGACTCACGAAGCGATGGCCGCGCTTGCCGAGACCATGACCCCCAAGCAGATCAAGCATCTCG AAGCTGAGGCATGGGAAGACTTCCTCGACATGTGCATCGGTCAGGCTGTTGTCTGGGCCGGTAACAACATCGAGCCGGAG AAGACTCCTTCCGAGCTGATGCCAACCGAACCGTACCTGCTCGGCTCGCACGCCGGTTGCGCCGGTATCTGGGTCAGTGG CCCTGGCGACATCGCAGGTGTCCCGGCAGAGTGGAGCTGGGGCTACAACAGGATGACCACCGTAGATGGTTTGTTCACCG CAGGTGACGGCGTCGGCGCATCGGGTCACAAGTTCTCTTCCGGTTCACACGCTGAAGGCCGTATCGCCGGCAAGAGCATG ACCGCATACTGCCTCGACCACGCCGACTACAAGCCGGAACTTGGCCGCGATGTTGACGAAGTGATCGCCGAGATCTATGC TCCGATGGAGACCTTCGCCAAGTATAAGGATTACAGCACCGATCCGTCGGTCAACCCGAACTACATCAGGCCGAAGATGT TCCAGGCCAGGCTCCAGAAGATCATGGACGAGTACGTGGCCGGTGTCTCTACCTGGTACACCACCAGCAAGACCATGCTC GAAAAGGGTCTTGAGCACCTGTCGCTCCTCAAGGAGGACGCCGAGAAGATGGCTGCCGCAGATCTGCACGAGCTGATGCG CGCCTGGGAGAACTACCATCGTCTGATGGCCGGTGAAGCCCACGCACGTCACATCCTCTTCCGCGAGGACAGCCGCTACC CCGGTTACTACTTCAGGGCTGACCACTTCTACGTCGATGACGAGAACTGGAAGTGCTTCACCATCTCGAAGTACGACAGG GACAGCAAGGAGTGGACGCTCTCCAAGAGGGACTACGTCCAGGTCGTTCCGGACTGA
Upstream 100 bases:
>100_bases GCCAGAGCCGGATTACGCGAACCTCAAGAAGCCTGGCTTCTTCAACATGACAGAATATCCGACCCTCTAAACAAACAAAT TACTCAAGGAGGCATTATCC
Downstream 100 bases:
>100_bases TCCGCTTATCGTTCAGGCATATCCCCGAGGACAAACCTCGGGGATTGCTTTATTGGCACCCGGATTTTGTAAGTTGAATA CTGCTTTGTGTCCTGTTTTC
Product: adenylylsulfate reductase subunit alpha
Products: Adenylylsulfate; reduced acceptor
Alternate protein names: Adenylylsulfate Reductase Subunit Alpha; Adenylylsulfate Reductase; Adenylylsulfate Reductase Alpha Subunit; Dissimilatory Adenylylsulfate Reductase Alpha Subunit; FAD Dependent Oxidoreductase; Oxidoreductase/HEAT Repeat-Containing Protein; Succinate Dehydrogenase/Fumarate Reductase; Adenylylsulphate Reductase Alpha Subunit; Biotin Synthetase; Dissimilatory Adenylylsulfate Reductase Subunit Alpha; Adenylylsulfate Reductase Subunit A
Number of amino acids: Translated: 658; Mature: 657
Protein sequence:
>658_residues MGVEKNEFKFSQKPEVVYVDTDILLIGGGMACCGAAYEAAKWATPKGLRITMVDKAAVDRSGAVAMGLSAINTYCGENDP ADYVKYVRADLMGIIREDLVYDLGRHVDNSVHLFEEWGLPIWKRDEDGSTMDGAKPAPKLTEGGKPVRSGRWQIMINGES YKVIVAEAAKKALEYNRKETGVEQNLYERVFISELIHDKNNPSKVAGAIGFSVREHKAYVFTAKTMLLACGGAVNVYRPR STAEGQGRAWYPVWNAGTTYALAAQAGCELVLMENRFVPARFKDGYGPVGAWFLFFKCKATNSLGEDYCATNLAAANKDF GKYAEDPHKLTTAMRNHMMMIDMKAGKGPILMRTHEAMAALAETMTPKQIKHLEAEAWEDFLDMCIGQAVVWAGNNIEPE KTPSELMPTEPYLLGSHAGCAGIWVSGPGDIAGVPAEWSWGYNRMTTVDGLFTAGDGVGASGHKFSSGSHAEGRIAGKSM TAYCLDHADYKPELGRDVDEVIAEIYAPMETFAKYKDYSTDPSVNPNYIRPKMFQARLQKIMDEYVAGVSTWYTTSKTML EKGLEHLSLLKEDAEKMAAADLHELMRAWENYHRLMAGEAHARHILFREDSRYPGYYFRADHFYVDDENWKCFTISKYDR DSKEWTLSKRDYVQVVPD
Sequences:
>Translated_658_residues MGVEKNEFKFSQKPEVVYVDTDILLIGGGMACCGAAYEAAKWATPKGLRITMVDKAAVDRSGAVAMGLSAINTYCGENDP ADYVKYVRADLMGIIREDLVYDLGRHVDNSVHLFEEWGLPIWKRDEDGSTMDGAKPAPKLTEGGKPVRSGRWQIMINGES YKVIVAEAAKKALEYNRKETGVEQNLYERVFISELIHDKNNPSKVAGAIGFSVREHKAYVFTAKTMLLACGGAVNVYRPR STAEGQGRAWYPVWNAGTTYALAAQAGCELVLMENRFVPARFKDGYGPVGAWFLFFKCKATNSLGEDYCATNLAAANKDF GKYAEDPHKLTTAMRNHMMMIDMKAGKGPILMRTHEAMAALAETMTPKQIKHLEAEAWEDFLDMCIGQAVVWAGNNIEPE KTPSELMPTEPYLLGSHAGCAGIWVSGPGDIAGVPAEWSWGYNRMTTVDGLFTAGDGVGASGHKFSSGSHAEGRIAGKSM TAYCLDHADYKPELGRDVDEVIAEIYAPMETFAKYKDYSTDPSVNPNYIRPKMFQARLQKIMDEYVAGVSTWYTTSKTML EKGLEHLSLLKEDAEKMAAADLHELMRAWENYHRLMAGEAHARHILFREDSRYPGYYFRADHFYVDDENWKCFTISKYDR DSKEWTLSKRDYVQVVPD >Mature_657_residues GVEKNEFKFSQKPEVVYVDTDILLIGGGMACCGAAYEAAKWATPKGLRITMVDKAAVDRSGAVAMGLSAINTYCGENDPA DYVKYVRADLMGIIREDLVYDLGRHVDNSVHLFEEWGLPIWKRDEDGSTMDGAKPAPKLTEGGKPVRSGRWQIMINGESY KVIVAEAAKKALEYNRKETGVEQNLYERVFISELIHDKNNPSKVAGAIGFSVREHKAYVFTAKTMLLACGGAVNVYRPRS TAEGQGRAWYPVWNAGTTYALAAQAGCELVLMENRFVPARFKDGYGPVGAWFLFFKCKATNSLGEDYCATNLAAANKDFG KYAEDPHKLTTAMRNHMMMIDMKAGKGPILMRTHEAMAALAETMTPKQIKHLEAEAWEDFLDMCIGQAVVWAGNNIEPEK TPSELMPTEPYLLGSHAGCAGIWVSGPGDIAGVPAEWSWGYNRMTTVDGLFTAGDGVGASGHKFSSGSHAEGRIAGKSMT AYCLDHADYKPELGRDVDEVIAEIYAPMETFAKYKDYSTDPSVNPNYIRPKMFQARLQKIMDEYVAGVSTWYTTSKTMLE KGLEHLSLLKEDAEKMAAADLHELMRAWENYHRLMAGEAHARHILFREDSRYPGYYFRADHFYVDDENWKCFTISKYDRD SKEWTLSKRDYVQVVPD
Specific function: Unknown
COG id: COG1053
COG function: function code C; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.8.99.2
Molecular weight: Translated: 73419; Mature: 73288
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVEKNEFKFSQKPEVVYVDTDILLIGGGMACCGAAYEAAKWATPKGLRITMVDKAAVDR CCCCCCCCCCCCCCCEEEEECCEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEEHHHCCC SGAVAMGLSAINTYCGENDPADYVKYVRADLMGIIREDLVYDLGRHVDNSVHLFEEWGLP CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCC IWKRDEDGSTMDGAKPAPKLTEGGKPVRSGRWQIMINGESYKVIVAEAAKKALEYNRKET EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEHHHHHHHHHCCHHHC GVEQNLYERVFISELIHDKNNPSKVAGAIGFSVREHKAYVFTAKTMLLACGGAVNVYRPR CHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEECCEEEEEEHHHHHHHCCCCEEEECCC STAEGQGRAWYPVWNAGTTYALAAQAGCELVLMENRFVPARFKDGYGPVGAWFLFFKCKA CCCCCCCCEEEEEECCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEC TNSLGEDYCATNLAAANKDFGKYAEDPHKLTTAMRNHMMMIDMKAGKGPILMRTHEAMAA CCCCCCHHHHHHHHHCCCCHHHHCCCHHHHHHHHHCCEEEEEEECCCCCEEEEHHHHHHH LAETMTPKQIKHLEAEAWEDFLDMCIGQAVVWAGNNIEPEKTPSELMPTEPYLLGSHAGC HHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHCCCCCCEEEECCCCC AGIWVSGPGDIAGVPAEWSWGYNRMTTVDGLFTAGDGVGASGHKFSSGSHAEGRIAGKSM EEEEECCCCCCCCCCCCCCCCCCCEEEECCEEECCCCCCCCCCCCCCCCCCCCEEECCCE TAYCLDHADYKPELGRDVDEVIAEIYAPMETFAKYKDYSTDPSVNPNYIRPKMFQARLQK EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH IMDEYVAGVSTWYTTSKTMLEKGLEHLSLLKEDAEKMAAADLHELMRAWENYHRLMAGEA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC HARHILFREDSRYPGYYFRADHFYVDDENWKCFTISKYDRDSKEWTLSKRDYVQVVPD HHEEEEEECCCCCCCEEEEECEEEEECCCEEEEEEECCCCCCCCEEECCCCEEEECCC >Mature Secondary Structure GVEKNEFKFSQKPEVVYVDTDILLIGGGMACCGAAYEAAKWATPKGLRITMVDKAAVDR CCCCCCCCCCCCCCEEEEECCEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEEHHHCCC SGAVAMGLSAINTYCGENDPADYVKYVRADLMGIIREDLVYDLGRHVDNSVHLFEEWGLP CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCC IWKRDEDGSTMDGAKPAPKLTEGGKPVRSGRWQIMINGESYKVIVAEAAKKALEYNRKET EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEHHHHHHHHHCCHHHC GVEQNLYERVFISELIHDKNNPSKVAGAIGFSVREHKAYVFTAKTMLLACGGAVNVYRPR CHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEECCEEEEEEHHHHHHHCCCCEEEECCC STAEGQGRAWYPVWNAGTTYALAAQAGCELVLMENRFVPARFKDGYGPVGAWFLFFKCKA CCCCCCCCEEEEEECCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEC TNSLGEDYCATNLAAANKDFGKYAEDPHKLTTAMRNHMMMIDMKAGKGPILMRTHEAMAA CCCCCCHHHHHHHHHCCCCHHHHCCCHHHHHHHHHCCEEEEEEECCCCCEEEEHHHHHHH LAETMTPKQIKHLEAEAWEDFLDMCIGQAVVWAGNNIEPEKTPSELMPTEPYLLGSHAGC HHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHCCCCCCEEEECCCCC AGIWVSGPGDIAGVPAEWSWGYNRMTTVDGLFTAGDGVGASGHKFSSGSHAEGRIAGKSM EEEEECCCCCCCCCCCCCCCCCCCEEEECCEEECCCCCCCCCCCCCCCCCCCCEEECCCE TAYCLDHADYKPELGRDVDEVIAEIYAPMETFAKYKDYSTDPSVNPNYIRPKMFQARLQK EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH IMDEYVAGVSTWYTTSKTMLEKGLEHLSLLKEDAEKMAAADLHELMRAWENYHRLMAGEA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC HARHILFREDSRYPGYYFRADHFYVDDENWKCFTISKYDRDSKEWTLSKRDYVQVVPD HHEEEEEECCCCCCCEEEEECEEEEECCCEEEEEEECCCCCCCCEEECCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: AMP; sulfite; acceptor
Specific reaction: AMP + sulfite + acceptor = adenylyl sulfate + reduced acceptor
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA