| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is oadA [H]
Identifier: 21673663
GI number: 21673663
Start: 794867
End: 796750
Strand: Direct
Name: oadA [H]
Synonym: CT0834
Alternate gene names: 21673663
Gene position: 794867-796750 (Clockwise)
Preceding gene: 21673662
Following gene: 21673664
Centisome position: 36.89
GC content: 61.41
Gene sequence:
>1884_bases ATGAAAAAAATACGGTTCATGGATGTCTCATTCCGCGACGGGTTCCAGTCCTGTTACGGAGCAAGGGTCAAAACCGAGGA TTTCCTGCCGGTGCTTGAAGCTGCCGTCGAGGCGGGCACCGATAACTTCGAGATCGGCGGAGGCGCGCGTTTCCAGAGCC TCTACTTCTACTGTCAGGAAGACGCCTTCGAGATGATGGATGCCTGCCGCCGCGTGGTCGGCCCCGACATCAATCTCCAG ACTTTGTCGCGAGGCGCAAACGTGGTCGGCCTCGTTTCGCAGTCGCGCGACATCATCGACCTGCACGCCAAAATGTTCAA GAAGCATGGCGTCAGCACCATCCGCAACTTCGACGCGCTCATGGATGTGCGCAATCTCGCCTGGTCGGGCCAGTGCATCG TCAACGCCGGGCTGAAGCACCAGGTGGTGATCGCCCTGATGGGCCTGCCGCCGGGGCTGAACGAGCCCTACTGCCACACG CCGCAGTTCTACCTCGACAAGCTCAAGGAGATTCTCGACGCGGGCATTCCGTTCGACAGCGTCGCCTTCAAGGACGCCTC CGGCACCACCACTCCCGCCGTGATCTACGAAACGATCAAGGGCGCTCGCAAGATGCTGCCCGAAGGCACCGTGCTCCAGT TCCACACGCACGACACCGCCGGAATGGGCGTGGCCTGCAACTTTGCGGCCATCGAGGCGGGCATTGACATCATCGATCTG GCGATGGCTCCGGTCAGCGGCGGCACCGCCGAGGTGGACATCCTTACCATGTGGCACCGCCTGCGCGGCACCGATTACAC CCTCGACATCGATCAGGAGAAGTACCTCGAAGTCGAGCGGATGTTTATCGAGCACATGGACAAGTACTACATGCCGCCGG AAGCCAAAGAGGTCAACCCGGTCATTCCGTTCTCGCCCATGCCGGGCGGCGCGCTGACGGCCAACACCCAGATGATGCGC GACCACGGCACGTTGCACTTCTTCCCGGAGGTGATCCGCAACATGCGGGAAGTTGTCGCCAAGGGCGGCTTCGGCTCGTC GGTGACGCCGGTTTCGCAGTTCTACTTCCAGCAGGCCTTCGCCAACACCGTGCAGGGGCCGTGGAAAAAGATCGTGGACG GCTACGGCAAGATGGTGCTCGGCTACTTCGGCAAGACCCCGGCAGCCCCCGATCCGGAGGTGGTGGCGCTCGCCTCGGAA CAGCTCGGCCTTGAGCCGACCGTTCAGGACGTGCACGACATCAACGACCGCAATCCCGATCTTGGCATCGAGCACAACCG CAAGCTCCTCGAAGAGGCCGGATTGCCGGTGACCGACGAAAATATCTTTATCGCGGCCACCTGCGGCGCGAAGGGCATTA GCTTCCTCAAGGGCGACAAGCCGATGGGCATCCGCTACAAAGCGGACGTCGAGGCGGAGGAGAAGGCCAAGCATAGCGAG GAGGAGCTGAAGGTCACTTCGCATGGCAACTCGTTGCAGGATCGCCTCTCCGACCTCATCAAACCGGCTGGACGCAGCAA CCTGTCAGGCAACTACATGGTGATGGTGGATGGCAAGTCGTTCAACGTGGTGATCGCCGATGGTATGGTCATGGCTCAGT CGATCGCGTCCGGCGCGCAGCCTTTCGTGATGCCTGTGCCGACGGCGGTCTCCGCACCCCAGCAGCATCGGGGCACGCCG GTCATGCCTTCCATGCCGGGCAACGTCTTCAAGATGGAGGTCGAAGCCGGTCAGAAGGTAGAGGAAGGGCAGGAGGTTGC CGTCATGGAGGCTATGAAGATGGAGTCCCCGGTCAAAGCGCCAAAGTCCGGTATCGTTACGGTAGTCCTCGCTAAGCCCG GAGACGCAGTTTCCGCCGCCCAGGCGCTGATGTATATCGAGTGA
Upstream 100 bases:
>100_bases AACCGGAAAACAGTTTACTTTCTATGCCGCGCCGCGTCAGCCGCAACAGCCTGCCGCGGCGCGGCCATAATGGATCAGTT AAAACCAGCGAGAGCGTTAT
Downstream 100 bases:
>100_bases TTGGGCGCGGGATGGATTTCCGACACAGCACAATTTGAAAGGGCAGGCTCAACAGGTCTGCCTTTTGTTTGTCTCTGATT AAGTGCTAAGTTTGGTGTAA
Product: oxaloacetate decarboxylase, alpha subunit
Products: NA
Alternate protein names: 2-oxoglutarate carboxylase alpha subunit [H]
Number of amino acids: Translated: 627; Mature: 627
Protein sequence:
>627_residues MKKIRFMDVSFRDGFQSCYGARVKTEDFLPVLEAAVEAGTDNFEIGGGARFQSLYFYCQEDAFEMMDACRRVVGPDINLQ TLSRGANVVGLVSQSRDIIDLHAKMFKKHGVSTIRNFDALMDVRNLAWSGQCIVNAGLKHQVVIALMGLPPGLNEPYCHT PQFYLDKLKEILDAGIPFDSVAFKDASGTTTPAVIYETIKGARKMLPEGTVLQFHTHDTAGMGVACNFAAIEAGIDIIDL AMAPVSGGTAEVDILTMWHRLRGTDYTLDIDQEKYLEVERMFIEHMDKYYMPPEAKEVNPVIPFSPMPGGALTANTQMMR DHGTLHFFPEVIRNMREVVAKGGFGSSVTPVSQFYFQQAFANTVQGPWKKIVDGYGKMVLGYFGKTPAAPDPEVVALASE QLGLEPTVQDVHDINDRNPDLGIEHNRKLLEEAGLPVTDENIFIAATCGAKGISFLKGDKPMGIRYKADVEAEEKAKHSE EELKVTSHGNSLQDRLSDLIKPAGRSNLSGNYMVMVDGKSFNVVIADGMVMAQSIASGAQPFVMPVPTAVSAPQQHRGTP VMPSMPGNVFKMEVEAGQKVEEGQEVAVMEAMKMESPVKAPKSGIVTVVLAKPGDAVSAAQALMYIE
Sequences:
>Translated_627_residues MKKIRFMDVSFRDGFQSCYGARVKTEDFLPVLEAAVEAGTDNFEIGGGARFQSLYFYCQEDAFEMMDACRRVVGPDINLQ TLSRGANVVGLVSQSRDIIDLHAKMFKKHGVSTIRNFDALMDVRNLAWSGQCIVNAGLKHQVVIALMGLPPGLNEPYCHT PQFYLDKLKEILDAGIPFDSVAFKDASGTTTPAVIYETIKGARKMLPEGTVLQFHTHDTAGMGVACNFAAIEAGIDIIDL AMAPVSGGTAEVDILTMWHRLRGTDYTLDIDQEKYLEVERMFIEHMDKYYMPPEAKEVNPVIPFSPMPGGALTANTQMMR DHGTLHFFPEVIRNMREVVAKGGFGSSVTPVSQFYFQQAFANTVQGPWKKIVDGYGKMVLGYFGKTPAAPDPEVVALASE QLGLEPTVQDVHDINDRNPDLGIEHNRKLLEEAGLPVTDENIFIAATCGAKGISFLKGDKPMGIRYKADVEAEEKAKHSE EELKVTSHGNSLQDRLSDLIKPAGRSNLSGNYMVMVDGKSFNVVIADGMVMAQSIASGAQPFVMPVPTAVSAPQQHRGTP VMPSMPGNVFKMEVEAGQKVEEGQEVAVMEAMKMESPVKAPKSGIVTVVLAKPGDAVSAAQALMYIE >Mature_627_residues MKKIRFMDVSFRDGFQSCYGARVKTEDFLPVLEAAVEAGTDNFEIGGGARFQSLYFYCQEDAFEMMDACRRVVGPDINLQ TLSRGANVVGLVSQSRDIIDLHAKMFKKHGVSTIRNFDALMDVRNLAWSGQCIVNAGLKHQVVIALMGLPPGLNEPYCHT PQFYLDKLKEILDAGIPFDSVAFKDASGTTTPAVIYETIKGARKMLPEGTVLQFHTHDTAGMGVACNFAAIEAGIDIIDL AMAPVSGGTAEVDILTMWHRLRGTDYTLDIDQEKYLEVERMFIEHMDKYYMPPEAKEVNPVIPFSPMPGGALTANTQMMR DHGTLHFFPEVIRNMREVVAKGGFGSSVTPVSQFYFQQAFANTVQGPWKKIVDGYGKMVLGYFGKTPAAPDPEVVALASE QLGLEPTVQDVHDINDRNPDLGIEHNRKLLEEAGLPVTDENIFIAATCGAKGISFLKGDKPMGIRYKADVEAEEKAKHSE EELKVTSHGNSLQDRLSDLIKPAGRSNLSGNYMVMVDGKSFNVVIADGMVMAQSIASGAQPFVMPVPTAVSAPQQHRGTP VMPSMPGNVFKMEVEAGQKVEEGQEVAVMEAMKMESPVKAPKSGIVTVVLAKPGDAVSAAQALMYIE
Specific function: Unknown
COG id: COG5016
COG function: function code C; Pyruvate/oxaloacetate carboxyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 carboxyltransferase domain [H]
Homologues:
Organism=Homo sapiens, GI106049528, Length=634, Percent_Identity=25.3943217665615, Blast_Score=119, Evalue=6e-27, Organism=Homo sapiens, GI106049295, Length=634, Percent_Identity=25.3943217665615, Blast_Score=119, Evalue=6e-27, Organism=Homo sapiens, GI106049292, Length=634, Percent_Identity=25.3943217665615, Blast_Score=119, Evalue=6e-27, Organism=Caenorhabditis elegans, GI17562816, Length=650, Percent_Identity=26, Blast_Score=122, Evalue=7e-28, Organism=Saccharomyces cerevisiae, GI6319695, Length=649, Percent_Identity=26.6563944530046, Blast_Score=143, Evalue=7e-35, Organism=Saccharomyces cerevisiae, GI6321376, Length=649, Percent_Identity=25.57781201849, Blast_Score=135, Evalue=2e-32, Organism=Drosophila melanogaster, GI281363050, Length=649, Percent_Identity=25.8859784283513, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI24652224, Length=649, Percent_Identity=25.8859784283513, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI24652222, Length=649, Percent_Identity=25.8859784283513, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI24652220, Length=649, Percent_Identity=25.8859784283513, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI24652218, Length=649, Percent_Identity=25.8859784283513, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI24652212, Length=649, Percent_Identity=25.8859784283513, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI24652210, Length=649, Percent_Identity=25.8859784283513, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI24652214, Length=649, Percent_Identity=25.8859784283513, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI19921944, Length=649, Percent_Identity=25.8859784283513, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI24652216, Length=649, Percent_Identity=25.8859784283513, Blast_Score=138, Evalue=1e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001882 - InterPro: IPR000089 - InterPro: IPR003379 - InterPro: IPR000891 - InterPro: IPR011053 [H]
Pfam domain/function: PF00364 Biotin_lipoyl; PF00682 HMGL-like; PF02436 PYC_OADA [H]
EC number: =6.4.1.7 [H]
Molecular weight: Translated: 68430; Mature: 68430
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS50991 PYR_CT ; PS50968 BIOTINYL_LIPOYL ; PS00188 BIOTIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIRFMDVSFRDGFQSCYGARVKTEDFLPVLEAAVEAGTDNFEIGGGARFQSLYFYCQE CCCEEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEECCCCCEEEHEEEEEHH DAFEMMDACRRVVGPDINLQTLSRGANVVGLVSQSRDIIDLHAKMFKKHGVSTIRNFDAL HHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHH MDVRNLAWSGQCIVNAGLKHQVVIALMGLPPGLNEPYCHTPQFYLDKLKEILDAGIPFDS HHHHHHCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC VAFKDASGTTTPAVIYETIKGARKMLPEGTVLQFHTHDTAGMGVACNFAAIEAGIDIIDL EEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEHHHHHCCCCEEEH AMAPVSGGTAEVDILTMWHRLRGTDYTLDIDQEKYLEVERMFIEHMDKYYMPPEAKEVNP EECCCCCCCCEEHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC VIPFSPMPGGALTANTQMMRDHGTLHFFPEVIRNMREVVAKGGFGSSVTPVSQFYFQQAF CCCCCCCCCCCEECCCHHHHHCCCEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH ANTVQGPWKKIVDGYGKMVLGYFGKTPAAPDPEVVALASEQLGLEPTVQDVHDINDRNPD HHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHCCCCCCHHHHHHCCCCCCC LGIEHNRKLLEEAGLPVTDENIFIAATCGAKGISFLKGDKPMGIRYKADVEAEEKAKHSE CCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHCCCCCCCEEEECCCCHHHHHCCCH EELKVTSHGNSLQDRLSDLIKPAGRSNLSGNYMVMVDGKSFNVVIADGMVMAQSIASGAQ HHEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEEECCHHHHHHHHCCCC PFVMPVPTAVSAPQQHRGTPVMPSMPGNVFKMEVEAGQKVEEGQEVAVMEAMKMESPVKA CEEEECCCCCCCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCC PKSGIVTVVLAKPGDAVSAAQALMYIE CCCCEEEEEEECCCCHHHHHHHHHCCC >Mature Secondary Structure MKKIRFMDVSFRDGFQSCYGARVKTEDFLPVLEAAVEAGTDNFEIGGGARFQSLYFYCQE CCCEEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEECCCCCEEEHEEEEEHH DAFEMMDACRRVVGPDINLQTLSRGANVVGLVSQSRDIIDLHAKMFKKHGVSTIRNFDAL HHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHH MDVRNLAWSGQCIVNAGLKHQVVIALMGLPPGLNEPYCHTPQFYLDKLKEILDAGIPFDS HHHHHHCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC VAFKDASGTTTPAVIYETIKGARKMLPEGTVLQFHTHDTAGMGVACNFAAIEAGIDIIDL EEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEHHHHHCCCCEEEH AMAPVSGGTAEVDILTMWHRLRGTDYTLDIDQEKYLEVERMFIEHMDKYYMPPEAKEVNP EECCCCCCCCEEHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC VIPFSPMPGGALTANTQMMRDHGTLHFFPEVIRNMREVVAKGGFGSSVTPVSQFYFQQAF CCCCCCCCCCCEECCCHHHHHCCCEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH ANTVQGPWKKIVDGYGKMVLGYFGKTPAAPDPEVVALASEQLGLEPTVQDVHDINDRNPD HHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHCCCCCCHHHHHHCCCCCCC LGIEHNRKLLEEAGLPVTDENIFIAATCGAKGISFLKGDKPMGIRYKADVEAEEKAKHSE CCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHCCCCCCCEEEECCCCHHHHHCCCH EELKVTSHGNSLQDRLSDLIKPAGRSNLSGNYMVMVDGKSFNVVIADGMVMAQSIASGAQ HHEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEEECCHHHHHHHHCCCC PFVMPVPTAVSAPQQHRGTPVMPSMPGNVFKMEVEAGQKVEEGQEVAVMEAMKMESPVKA CEEEECCCCCCCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCC PKSGIVTVVLAKPGDAVSAAQALMYIE CCCCEEEEEEECCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA