| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673660
Identifier: 21673660
GI number: 21673660
Start: 791285
End: 792832
Strand: Reverse
Name: 21673660
Synonym: CT0831
Alternate gene names: NA
Gene position: 792832-791285 (Counterclockwise)
Preceding gene: 21673665
Following gene: 21673655
Centisome position: 36.79
GC content: 61.56
Gene sequence:
>1548_bases ATGATCCAGCCAGCCGAAGCCCTTCGCCGCCCGGAAGCGTATCATCATCCGGTCGAAAAGGTGATCGAGGTGGTCGAGAC CCATATATCATGGATCTTCCTCACCGGCCAGTTCGCCTACAAACTCAAGAAGCCGGTCAATCTCGGCTTCCTTGACTTCT CGACGCTCGAACGGCGCAAGCATTTCTGTGAAGAGGAGTTGCGCCTGAACCGGCGGCTCTGCCCTGACCTCTATCTCGAC GTGCTGCCGGTAACAGAGTCGGATGGAAAAATCCGGATCGGCGGCGATGGCGAGGCGATTGACTACGTGATCCGCATGGT GCAGTTCGACCGGAGGTTCGAGCTCGACCGGCTGCTGCGCCGGGGCGAGCTGACAAAGCGCGAGATCGGCGAGGCCGCCG AGGTGATCGCCGCCTTCCATGCCGAGGCTCCGCGAGCCGATCCCTCGGCGAAGTTCGGCACGCCGGAGGTGATCCTCAAG CCGATGCTCGAAAATCTCGACCTGACCGAAGAGGTCGCCCGCACCATCGAAGAGCGGAGCGACATCGAAAAAATCCGCCA CTGGACGCTCACCGAACACCGGCGGCTCGGCGGCGTCATGCGGGAGCGCAAGGCGCTCGGCATGGTGCGCGAGTGCCACG GCGACCTGCACACCGGCAACATGGTAATACGCGACGGCAAGATCACGATTTTCGACTGCATCGAGTTCAGCCACGTGCTG AGCATCATCGACGTCATGAGCGACGTCGCGTTCCTCTTCATGGACCTGGAACACTCCGGCCACCCCGAACTGGCGTGGCA TTTTCTGAACGCCTGGCTCTCGAAAAACGGCGATTACAACGGCTTGCAGGTGCTGCGTTTGTATTGCGTGTACCGGGCGA TGGTGCGGGCCAAGGTCACCTCGATCCGCGTTGCGCAGGAGTCGGACGAGGAGGAAAAAGCCAAAACGCTCGCCGAGCAC CACTCCTACATTCGGCTCGCGCTCGGCTACACGCAGCCCCGAAAACCGATGCTGCTCATCACCTACGGCGTCTCGGGCAG CGGCAAATCGACCTGGGCAGCGCGACTCGCCGACTTGGGCGGCTTCATCCACATCCGCTCGGACGTCGAGCGCAAGCGCC TCTTCGGCATCGACAGCCTCGAACGCAGCGCCGGAAAAGGGTTCGACATCTACACGCCTGAAGCGACGCAGAAAACCTAC GACGTCATGCTCGACGCCGCCTCGACCGCGCTGTCAGCAGGCTTTCCGGTGATCGTCGATGCCACCTTCCCCGATGCCCG CAAGAGAGCCCCTTTCATCCGCCTGGCAAGAGCGATGAACTGCGAGTGCCGCATTCTCTGCTTCCAAGCCACGCACGAGA CGCTGCGCGAGCGGGTACGAACGCGACACAAAAAAGGAAGCGACGCCTCCGAAGCTGACCAGAAGGTTCTCGAAGCCCAG CTTCACGCCATTGAGTCGCCCGCCGGAGACGAAAAAGCCCTCTGCATCCAGATCGACACAGAGGGCGAAGTTACCATCGA AGCGCTGCTGACGGCGCTGAAAATGTGA
Upstream 100 bases:
>100_bases CCAGCGAGACGGTGCCGTTAACGCCCCGTTCTGGTTATCCCGGAATTTTTGCCTTAGCTTTCGGAGTAAAAGAACCAACT CGTCAAAACCCGCAAAAAGC
Downstream 100 bases:
>100_bases CAAAAGCTACACCTCGACGCCGAAGAAGTACCGGATGCCAAGTCCCGCCAAAAAGCTGATGCCGGAGACCGCGACAATCA GCCCGGCCATTTCGAGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 515; Mature: 515
Protein sequence:
>515_residues MIQPAEALRRPEAYHHPVEKVIEVVETHISWIFLTGQFAYKLKKPVNLGFLDFSTLERRKHFCEEELRLNRRLCPDLYLD VLPVTESDGKIRIGGDGEAIDYVIRMVQFDRRFELDRLLRRGELTKREIGEAAEVIAAFHAEAPRADPSAKFGTPEVILK PMLENLDLTEEVARTIEERSDIEKIRHWTLTEHRRLGGVMRERKALGMVRECHGDLHTGNMVIRDGKITIFDCIEFSHVL SIIDVMSDVAFLFMDLEHSGHPELAWHFLNAWLSKNGDYNGLQVLRLYCVYRAMVRAKVTSIRVAQESDEEEKAKTLAEH HSYIRLALGYTQPRKPMLLITYGVSGSGKSTWAARLADLGGFIHIRSDVERKRLFGIDSLERSAGKGFDIYTPEATQKTY DVMLDAASTALSAGFPVIVDATFPDARKRAPFIRLARAMNCECRILCFQATHETLRERVRTRHKKGSDASEADQKVLEAQ LHAIESPAGDEKALCIQIDTEGEVTIEALLTALKM
Sequences:
>Translated_515_residues MIQPAEALRRPEAYHHPVEKVIEVVETHISWIFLTGQFAYKLKKPVNLGFLDFSTLERRKHFCEEELRLNRRLCPDLYLD VLPVTESDGKIRIGGDGEAIDYVIRMVQFDRRFELDRLLRRGELTKREIGEAAEVIAAFHAEAPRADPSAKFGTPEVILK PMLENLDLTEEVARTIEERSDIEKIRHWTLTEHRRLGGVMRERKALGMVRECHGDLHTGNMVIRDGKITIFDCIEFSHVL SIIDVMSDVAFLFMDLEHSGHPELAWHFLNAWLSKNGDYNGLQVLRLYCVYRAMVRAKVTSIRVAQESDEEEKAKTLAEH HSYIRLALGYTQPRKPMLLITYGVSGSGKSTWAARLADLGGFIHIRSDVERKRLFGIDSLERSAGKGFDIYTPEATQKTY DVMLDAASTALSAGFPVIVDATFPDARKRAPFIRLARAMNCECRILCFQATHETLRERVRTRHKKGSDASEADQKVLEAQ LHAIESPAGDEKALCIQIDTEGEVTIEALLTALKM >Mature_515_residues MIQPAEALRRPEAYHHPVEKVIEVVETHISWIFLTGQFAYKLKKPVNLGFLDFSTLERRKHFCEEELRLNRRLCPDLYLD VLPVTESDGKIRIGGDGEAIDYVIRMVQFDRRFELDRLLRRGELTKREIGEAAEVIAAFHAEAPRADPSAKFGTPEVILK PMLENLDLTEEVARTIEERSDIEKIRHWTLTEHRRLGGVMRERKALGMVRECHGDLHTGNMVIRDGKITIFDCIEFSHVL SIIDVMSDVAFLFMDLEHSGHPELAWHFLNAWLSKNGDYNGLQVLRLYCVYRAMVRAKVTSIRVAQESDEEEKAKTLAEH HSYIRLALGYTQPRKPMLLITYGVSGSGKSTWAARLADLGGFIHIRSDVERKRLFGIDSLERSAGKGFDIYTPEATQKTY DVMLDAASTALSAGFPVIVDATFPDARKRAPFIRLARAMNCECRILCFQATHETLRERVRTRHKKGSDASEADQKVLEAQ LHAIESPAGDEKALCIQIDTEGEVTIEALLTALKM
Specific function: Some isolated peptides of this protein are able to bind to human U937 monocytoblastic and A549 epithelial cell lines [H]
COG id: COG2187
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Secreted, cell wall [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR010488 [H]
Pfam domain/function: PF06414 Zeta_toxin [H]
EC number: NA
Molecular weight: Translated: 58511; Mature: 58511
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQPAEALRRPEAYHHPVEKVIEVVETHISWIFLTGQFAYKLKKPVNLGFLDFSTLERRK CCCCHHHHCCCHHHCCHHHHHHHHHHHHHHEEEEECHHHHHHCCCCCCCEECHHHHHHHH HFCEEELRLNRRLCPDLYLDVLPVTESDGKIRIGGDGEAIDYVIRMVQFDRRFELDRLLR HHHHHHHHHHHHCCCHHHHEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH RGELTKREIGEAAEVIAAFHAEAPRADPSAKFGTPEVILKPMLENLDLTEEVARTIEERS HCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH DIEKIRHWTLTEHRRLGGVMRERKALGMVRECHGDLHTGNMVIRDGKITIFDCIEFSHVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEHHHHHHHHH SIIDVMSDVAFLFMDLEHSGHPELAWHFLNAWLSKNGDYNGLQVLRLYCVYRAMVRAKVT HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH SIRVAQESDEEEKAKTLAEHHSYIRLALGYTQPRKPMLLITYGVSGSGKSTWAARLADLG HEEECCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHCC GFIHIRSDVERKRLFGIDSLERSAGKGFDIYTPEATQKTYDVMLDAASTALSAGFPVIVD CEEEECCHHHHHHHCCCCHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEE ATFPDARKRAPFIRLARAMNCECRILCFQATHETLRERVRTRHKKGSDASEADQKVLEAQ CCCCCHHHCCHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LHAIESPAGDEKALCIQIDTEGEVTIEALLTALKM HHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHCC >Mature Secondary Structure MIQPAEALRRPEAYHHPVEKVIEVVETHISWIFLTGQFAYKLKKPVNLGFLDFSTLERRK CCCCHHHHCCCHHHCCHHHHHHHHHHHHHHEEEEECHHHHHHCCCCCCCEECHHHHHHHH HFCEEELRLNRRLCPDLYLDVLPVTESDGKIRIGGDGEAIDYVIRMVQFDRRFELDRLLR HHHHHHHHHHHHCCCHHHHEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH RGELTKREIGEAAEVIAAFHAEAPRADPSAKFGTPEVILKPMLENLDLTEEVARTIEERS HCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH DIEKIRHWTLTEHRRLGGVMRERKALGMVRECHGDLHTGNMVIRDGKITIFDCIEFSHVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEHHHHHHHHH SIIDVMSDVAFLFMDLEHSGHPELAWHFLNAWLSKNGDYNGLQVLRLYCVYRAMVRAKVT HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH SIRVAQESDEEEKAKTLAEHHSYIRLALGYTQPRKPMLLITYGVSGSGKSTWAARLADLG HEEECCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHCC GFIHIRSDVERKRLFGIDSLERSAGKGFDIYTPEATQKTYDVMLDAASTALSAGFPVIVD CEEEECCHHHHHHHCCCCHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEE ATFPDARKRAPFIRLARAMNCECRILCFQATHETLRERVRTRHKKGSDASEADQKVLEAQ CCCCCHHHCCHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LHAIESPAGDEKALCIQIDTEGEVTIEALLTALKM HHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]