| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673659
Identifier: 21673659
GI number: 21673659
Start: 790403
End: 791278
Strand: Direct
Name: 21673659
Synonym: CT0830
Alternate gene names: NA
Gene position: 790403-791278 (Clockwise)
Preceding gene: 21673658
Following gene: 21673661
Centisome position: 36.68
GC content: 56.51
Gene sequence:
>876_bases GTGAGCCAACTGTCTGAAACCGAACTTCGGCATGTCGCCGGATTTCAGAAAAACGAGATCACCGAGCACCACATCTACAA GAATCTCGCCAAAAAGGTTGACGGCGTGAAGAACCGCCGCGTTTTTGCCCAGATTTCCGAAGACGAACTTCGTCATTACC ATGTCTGGAAAAAATATACTGGGAGGGAGGTGGAGCCGGATCGCTTTAAAATCTGGCTCTACTCGATGATCGCCCTCTTG TTTGGTTTTACCTTTGCCGTCAAGCTGATGGAGGGGAAAGAGCAGAACGCGCAGCAGGAGTACGAGCGGGTGGCGAACAT GGGCGTCGAAATCGATGGCCTCATCAAGGACGAGGAGGAGCACGAGCAGGCGCTGATCGCCGTGCTCGATGAGGAGCGGC TGCAATATACCGGTTCGATCGTACTTGGCCTGAACGACGCCTTGGTCGAACTGACGGGTGCTCTGGCAGGCCTGACCTTC GCCTTGCAGAATACCCGGCTCGTAGCGCTGACAGCAGTGATCACCGGTTTTGCCGCCGCCCTGTCGATGGCCTCGTCGGA ATATCTCTCAACCAAAACCGAGGCGGGTGTGAAAAGCCCTGTCAAGGCCTCGATCTACACGGGCGTCGCCTATATCATCG CCGTCGCGGTGCTGATCGTCCCGTATCTCGTTCTGAACGACATTTACCTGAGCCTCGCGCTCGCGTTTGCCGGTGCGTTT GTGGTGATCGCCCTGTTCAATTTTTATGTCTCCGTGGCGCAGGGCGTGCCGTTCAGGAGCCGTTTTCTCGAAATGGCCGG GCTGATTGTCGCGGTCTCCGGCATCAGCTTTTTGGCGGGACTTGGCATCCGGTACTTCTTCGGCGTCGAGGTGTAG
Upstream 100 bases:
>100_bases CGAACAGCACTGCTGTTCGGCGTTATCAAACGGCCTGTCGGGATGCGTGGTTGCTCCGGGCGGGCCGTTTGACCGGTAAC CCATTAACCACTTTTCACTT
Downstream 100 bases:
>100_bases CTTTTGTCACATTTTCAGCGCCGTCAGCAGCGCTTCGATGGTAACTTCGCCCTCTGTGTCGATCTGGATGCAGAGGGCTT TTTCGTCTCCGGCGGGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Ferritin CCC1 C Ferritin CCC1 Like C; Transmembrane Protein
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MSQLSETELRHVAGFQKNEITEHHIYKNLAKKVDGVKNRRVFAQISEDELRHYHVWKKYTGREVEPDRFKIWLYSMIALL FGFTFAVKLMEGKEQNAQQEYERVANMGVEIDGLIKDEEEHEQALIAVLDEERLQYTGSIVLGLNDALVELTGALAGLTF ALQNTRLVALTAVITGFAAALSMASSEYLSTKTEAGVKSPVKASIYTGVAYIIAVAVLIVPYLVLNDIYLSLALAFAGAF VVIALFNFYVSVAQGVPFRSRFLEMAGLIVAVSGISFLAGLGIRYFFGVEV
Sequences:
>Translated_291_residues MSQLSETELRHVAGFQKNEITEHHIYKNLAKKVDGVKNRRVFAQISEDELRHYHVWKKYTGREVEPDRFKIWLYSMIALL FGFTFAVKLMEGKEQNAQQEYERVANMGVEIDGLIKDEEEHEQALIAVLDEERLQYTGSIVLGLNDALVELTGALAGLTF ALQNTRLVALTAVITGFAAALSMASSEYLSTKTEAGVKSPVKASIYTGVAYIIAVAVLIVPYLVLNDIYLSLALAFAGAF VVIALFNFYVSVAQGVPFRSRFLEMAGLIVAVSGISFLAGLGIRYFFGVEV >Mature_290_residues SQLSETELRHVAGFQKNEITEHHIYKNLAKKVDGVKNRRVFAQISEDELRHYHVWKKYTGREVEPDRFKIWLYSMIALLF GFTFAVKLMEGKEQNAQQEYERVANMGVEIDGLIKDEEEHEQALIAVLDEERLQYTGSIVLGLNDALVELTGALAGLTFA LQNTRLVALTAVITGFAAALSMASSEYLSTKTEAGVKSPVKASIYTGVAYIIAVAVLIVPYLVLNDIYLSLALAFAGAFV VIALFNFYVSVAQGVPFRSRFLEMAGLIVAVSGISFLAGLGIRYFFGVEV
Specific function: Unknown
COG id: COG1814
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32232; Mature: 32101
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLSETELRHVAGFQKNEITEHHIYKNLAKKVDGVKNRRVFAQISEDELRHYHVWKKYT CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHEEECCHHHHHHHHHHHHHC GREVEPDRFKIWLYSMIALLFGFTFAVKLMEGKEQNAQQEYERVANMGVEIDGLIKDEEE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEECCCCCCHH HEQALIAVLDEERLQYTGSIVLGLNDALVELTGALAGLTFALQNTRLVALTAVITGFAAA HHHHHHHHHHHHHHHHHCEEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LSMASSEYLSTKTEAGVKSPVKASIYTGVAYIIAVAVLIVPYLVLNDIYLSLALAFAGAF HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVIALFNFYVSVAQGVPFRSRFLEMAGLIVAVSGISFLAGLGIRYFFGVEV HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SQLSETELRHVAGFQKNEITEHHIYKNLAKKVDGVKNRRVFAQISEDELRHYHVWKKYT CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHEEECCHHHHHHHHHHHHHC GREVEPDRFKIWLYSMIALLFGFTFAVKLMEGKEQNAQQEYERVANMGVEIDGLIKDEEE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEECCCCCCHH HEQALIAVLDEERLQYTGSIVLGLNDALVELTGALAGLTFALQNTRLVALTAVITGFAAA HHHHHHHHHHHHHHHHHCEEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LSMASSEYLSTKTEAGVKSPVKASIYTGVAYIIAVAVLIVPYLVLNDIYLSLALAFAGAF HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVIALFNFYVSVAQGVPFRSRFLEMAGLIVAVSGISFLAGLGIRYFFGVEV HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA