| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673619
Identifier: 21673619
GI number: 21673619
Start: 757044
End: 758069
Strand: Direct
Name: 21673619
Synonym: CT0789
Alternate gene names: NA
Gene position: 757044-758069 (Clockwise)
Preceding gene: 21673615
Following gene: 21673620
Centisome position: 35.13
GC content: 54.58
Gene sequence:
>1026_bases GTGAGTGCCTTGCGCAAGTCAGTGCTGATTGCACCATCCAACAGGCCCTGTTTGAACATGAAGTGTTCCGTTCAAAGAAG TGTCCGGCTGATTTCTCTTTTGGCCGTCCTGGGCTTTTTCCATGGCACAGCCGCTGCCACCTTGTGGTCTTCAGGGCCGC GCCAGACCGGCGAGGTCGTTCTCGACGAGATGGTTGCCGGGGCGGGCGGCTTCGTCGTTCGCGTCGGAAGCAACGGATGC ACCAGCAAAAACTCGTTCGAGGTGCTGGTGAACAAAAAACCGGGTCTTACTGATCTCGCGCCGCACTACGAACTGACGAT TGTCCGCAAGGTGCCAGATGAGTGCAAGGCGATTGTCGAGGATGGCACTGTGATTGCGTATGATCTGAAGCAGGATCTCG GCATCTCTGGTCACTACACCTATACCATTGCCAATCCCGTTTATTCGCCGCGCCCATACGCGGATACGAGTGATTACTAT CTGCCTAATGCCTTGAAGGATGCGGCGCCTGATTTTCCCAAGGTTACAGAGGTGCGCCCCGAGCCATTCGAGAAGTACAC TGCCAGGCCGGACTTTTTTTCCTGCCTTCTACCCGTTGATTGGAAACGGAGTCCCGCCGATCCGGAGGGTGACGCAAAAG CTGGGATTTACGAGGTGCAGCTCACAAAAGAAGAGCTTGCCAAACCGGAGGATGGCGAGAAATATTACTTCCCGCATCCG CTCATCTACGTTGGCTACTACGCCCCCGGCAACCGTGAGGGGAAAACGTATGCAAACTATCTGGCCGATTACGACCGGCT GATGCGCAAGAACACGGGCAGCAAACAGTCATCGTACAGCAAACCGGTGAAGACGACGGTCGCCGGGCTTGAGGCGACTG TTACCGATTACGAGGTCTGGCAGGAGCTTCCGCGTGGCCCGCTGTTTACCACAAAGTACTGGCTGAAGGCTCGTTTCGTG TTTGTCAAAGCAAGGCAGGGATTTTATGTGCTGGCATTCAAAAGTCCAAAAGAGTTCTATATATAA
Upstream 100 bases:
>100_bases ATTTCAGTTTGATGTAATTGATCAGTAGTAGATTGCAATCGTTACAGTCTCTTCTTCCGGTTCTGCATTTTCGGGTTAGT CGCATCAGCGGAGAAGAAGC
Downstream 100 bases:
>100_bases TCAGGGCTTCCCCACATTCCAGACGGTGCTTGACTCTTTCGTTCCCAAACGGTAAAACGACTTCGCCATGCCGGATATCA GGATAAAACCGACGCGCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MSALRKSVLIAPSNRPCLNMKCSVQRSVRLISLLAVLGFFHGTAAATLWSSGPRQTGEVVLDEMVAGAGGFVVRVGSNGC TSKNSFEVLVNKKPGLTDLAPHYELTIVRKVPDECKAIVEDGTVIAYDLKQDLGISGHYTYTIANPVYSPRPYADTSDYY LPNALKDAAPDFPKVTEVRPEPFEKYTARPDFFSCLLPVDWKRSPADPEGDAKAGIYEVQLTKEELAKPEDGEKYYFPHP LIYVGYYAPGNREGKTYANYLADYDRLMRKNTGSKQSSYSKPVKTTVAGLEATVTDYEVWQELPRGPLFTTKYWLKARFV FVKARQGFYVLAFKSPKEFYI
Sequences:
>Translated_341_residues MSALRKSVLIAPSNRPCLNMKCSVQRSVRLISLLAVLGFFHGTAAATLWSSGPRQTGEVVLDEMVAGAGGFVVRVGSNGC TSKNSFEVLVNKKPGLTDLAPHYELTIVRKVPDECKAIVEDGTVIAYDLKQDLGISGHYTYTIANPVYSPRPYADTSDYY LPNALKDAAPDFPKVTEVRPEPFEKYTARPDFFSCLLPVDWKRSPADPEGDAKAGIYEVQLTKEELAKPEDGEKYYFPHP LIYVGYYAPGNREGKTYANYLADYDRLMRKNTGSKQSSYSKPVKTTVAGLEATVTDYEVWQELPRGPLFTTKYWLKARFV FVKARQGFYVLAFKSPKEFYI >Mature_340_residues SALRKSVLIAPSNRPCLNMKCSVQRSVRLISLLAVLGFFHGTAAATLWSSGPRQTGEVVLDEMVAGAGGFVVRVGSNGCT SKNSFEVLVNKKPGLTDLAPHYELTIVRKVPDECKAIVEDGTVIAYDLKQDLGISGHYTYTIANPVYSPRPYADTSDYYL PNALKDAAPDFPKVTEVRPEPFEKYTARPDFFSCLLPVDWKRSPADPEGDAKAGIYEVQLTKEELAKPEDGEKYYFPHPL IYVGYYAPGNREGKTYANYLADYDRLMRKNTGSKQSSYSKPVKTTVAGLEATVTDYEVWQELPRGPLFTTKYWLKARFVF VKARQGFYVLAFKSPKEFYI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38131; Mature: 38000
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALRKSVLIAPSNRPCLNMKCSVQRSVRLISLLAVLGFFHGTAAATLWSSGPRQTGEVV CCCCCCCEEEECCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LDEMVAGAGGFVVRVGSNGCTSKNSFEVLVNKKPGLTDLAPHYELTIVRKVPDECKAIVE HHHHHCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCHHHHHHHC DGTVIAYDLKQDLGISGHYTYTIANPVYSPRPYADTSDYYLPNALKDAAPDFPKVTEVRP CCCEEEEECHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC EPFEKYTARPDFFSCLLPVDWKRSPADPEGDAKAGIYEVQLTKEELAKPEDGEKYYFPHP CCHHHHCCCCCHHEEECCCCCCCCCCCCCCCCCCCEEEEEECHHHHCCCCCCCEEECCCC LIYVGYYAPGNREGKTYANYLADYDRLMRKNTGSKQSSYSKPVKTTVAGLEATVTDYEVW EEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCEEEHHHHHHH QELPRGPLFTTKYWLKARFVFVKARQGFYVLAFKSPKEFYI HHCCCCCCEEHHHEEEEEEEEEEECCCEEEEEECCCCCCCC >Mature Secondary Structure SALRKSVLIAPSNRPCLNMKCSVQRSVRLISLLAVLGFFHGTAAATLWSSGPRQTGEVV CCCCCCEEEECCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LDEMVAGAGGFVVRVGSNGCTSKNSFEVLVNKKPGLTDLAPHYELTIVRKVPDECKAIVE HHHHHCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCHHHHHHHC DGTVIAYDLKQDLGISGHYTYTIANPVYSPRPYADTSDYYLPNALKDAAPDFPKVTEVRP CCCEEEEECHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC EPFEKYTARPDFFSCLLPVDWKRSPADPEGDAKAGIYEVQLTKEELAKPEDGEKYYFPHP CCHHHHCCCCCHHEEECCCCCCCCCCCCCCCCCCCEEEEEECHHHHCCCCCCCEEECCCC LIYVGYYAPGNREGKTYANYLADYDRLMRKNTGSKQSSYSKPVKTTVAGLEATVTDYEVW EEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCEEEHHHHHHH QELPRGPLFTTKYWLKARFVFVKARQGFYVLAFKSPKEFYI HHCCCCCCEEHHHEEEEEEEEEEECCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA