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The map label for this gene is ndhC [H]

Identifier: 21673596

GI number: 21673596

Start: 739353

End: 739784

Strand: Direct

Name: ndhC [H]

Synonym: CT0766

Alternate gene names: 21673596

Gene position: 739353-739784 (Clockwise)

Preceding gene: 21673595

Following gene: 21673597

Centisome position: 34.31

GC content: 52.08

Gene sequence:

>432_bases
ATGGATCAGACGTTAAGCGGTTTCGGTACCGTATTCGTGTTTCTCGTACTCGGTATTGTGTTCGTCGTAGGTGGTTACCT
GACGGCGAGAATGCTCAGGCCGAGCAGACCCAACCCCGAAAAGAATTCTACCTACGAGTGCGGCGAGCATGCTGTCGGCA
GCGCGTGGGTCAAGTTCAATATCCGATTTTATGTCGTTGCCCTCATTTTTATCATTTTCGACGTTGAAGTCGTCTTCCTC
TATCCCTGGGCTACGGTTTTCAAACAGCTTGGCGCTTTCGCGCTGGTTGAAGTGCTGATTTTCGTCGGTATTCTTGTACT
CGGACTTGTCTATGCCTGGGTCAAGGGTGACCTGGACTGGGTTCGCCCGACTCCAAATATCCCGAAAATGCCGGAGATGC
CTGTTCGTCGCTCCGGCAAGGCGAACGGATAA

Upstream 100 bases:

>100_bases
GATTTTTTTATATTGGCGGCACCTGATTTAGCGGCCCTTCAAGCCTGTCAGAAAAAGGGAACTTGTTACTCCCTTTACCA
ATAAAGTCAAACAACAGAAC

Downstream 100 bases:

>100_bases
TCTTTCAATCATCATCGATTTTACGCTATGGGTTTGCTTGACGCCAGAATATCGAACCGCAACGTGCTGGTGACTTCGGT
TGACAACGTGATGAACTGGG

Product: NADH dehydrogenase I, subunit 3

Products: NA

Alternate protein names: NADH dehydrogenase I subunit A; NDH-1 subunit A; NUO1 [H]

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MDQTLSGFGTVFVFLVLGIVFVVGGYLTARMLRPSRPNPEKNSTYECGEHAVGSAWVKFNIRFYVVALIFIIFDVEVVFL
YPWATVFKQLGAFALVEVLIFVGILVLGLVYAWVKGDLDWVRPTPNIPKMPEMPVRRSGKANG

Sequences:

>Translated_143_residues
MDQTLSGFGTVFVFLVLGIVFVVGGYLTARMLRPSRPNPEKNSTYECGEHAVGSAWVKFNIRFYVVALIFIIFDVEVVFL
YPWATVFKQLGAFALVEVLIFVGILVLGLVYAWVKGDLDWVRPTPNIPKMPEMPVRRSGKANG
>Mature_143_residues
MDQTLSGFGTVFVFLVLGIVFVVGGYLTARMLRPSRPNPEKNSTYECGEHAVGSAWVKFNIRFYVVALIFIIFDVEVVFL
YPWATVFKQLGAFALVEVLIFVGILVLGLVYAWVKGDLDWVRPTPNIPKMPEMPVRRSGKANG

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translo

COG id: COG0838

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 3 (chain A)

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788625, Length=134, Percent_Identity=35.0746268656716, Blast_Score=76, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023043
- InterPro:   IPR000440 [H]

Pfam domain/function: PF00507 Oxidored_q4 [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 16002; Mature: 16002

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQTLSGFGTVFVFLVLGIVFVVGGYLTARMLRPSRPNPEKNSTYECGEHAVGSAWVKFN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCHHHHHH
IRFYVVALIFIIFDVEVVFLYPWATVFKQLGAFALVEVLIFVGILVLGLVYAWVKGDLDW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VRPTPNIPKMPEMPVRRSGKANG
CCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDQTLSGFGTVFVFLVLGIVFVVGGYLTARMLRPSRPNPEKNSTYECGEHAVGSAWVKFN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCHHHHHH
IRFYVVALIFIIFDVEVVFLYPWATVFKQLGAFALVEVLIFVGILVLGLVYAWVKGDLDW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VRPTPNIPKMPEMPVRRSGKANG
CCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA