Click here to switch to the map view.

The map label for this gene is yloA [H]

Identifier: 21673575

GI number: 21673575

Start: 721919

End: 723547

Strand: Reverse

Name: yloA [H]

Synonym: CT0745

Alternate gene names: 21673575

Gene position: 723547-721919 (Counterclockwise)

Preceding gene: 21673579

Following gene: 21673574

Centisome position: 33.58

GC content: 60.1

Gene sequence:

>1629_bases
ATGCTCCGCAACTACTTTACGCTTTACCACGCAGCCGCAGAGCTGCACGACCGGCTTGCGGATGGCTACCTCTTCGAAAT
CCATTCGCAGCAGAAAAACGAACTCACGCTCGCCTTCGTCACGCAGGAGGGCGAGCATCTGCAACTCATTGTCACCGTGC
GCTCGCCGCACTTCTCGCTCTACACTCGCGAGGGACTAAACCGCAAGAATCGCAACACGGCGAGCATCATGACCAAGGTC
TATGAACGGCAGGTCACCGGCGTGGCGATCTCGCCCGCCGACCGGCAGATCAGCTTAGCTCTCGACGACGGCCACGCGCT
CGTGCTACGAATGTTCAGCGCCGAAACCAACATGCTGCTCGTGCGCGACGGCGTAATCGTCGATGCCTTCAAGGATGCTC
GCAAACTCGAAAATACGCCGTTCGGGGAGACGACTGCCGGCACGCCATATTTCCGGGCGCTGGAGCAGCTCGCCTCCGAC
CCGGCACTGTTCCGACGGAAGCTTGAAGAGGGCGACAGCACGGTGCCACTCGACCGGCGACTGCTCGCGATGCTACCAGG
CTTCGACCACAAGCTCGTCCGGCGGCTCCTCGCGATAACCGAAAGCGATGCGACTGAACAGCTCTACTCGGCGTTCGTCG
CCATCTTCTACGACCTCGCCTCCCCGACCCCGTGCGTCATCGAAAATCCCGGCGAGCCACCTGCCTTCTCGCTCTTCCCG
CCAGCACCGGAGGGCGAGGCGACGACCTTCGAGAGCGTCATCGACGCGCTGAACCACTACAGCCGTAAGATGTACCGCCA
CCTTCACTTGCGGGAACGAGCCGTGGCGATGCGCCGGGAGCTGACGGCGAAAATCGGCAAGCTTGAAAAGGAACTCGCAG
CGAATGCCGGACACGATCCGGAGGAGATTTCGCAGCGCAACGAACGATACGGCCACCTGCTCACTGGAGCCATCGGCGCA
ATCGAGCCATTGGACGCCGCGGTGACGGTGCCGAACCTCTTCGCCCCCGGCTCTCCCGACGTGACGATTCCCCTCAAACG
CGGTCTCAACCTCCAGGAAAACGCCGCGTGGTACTTTACGCAGGCGAAGAAAAACCGCAAAAAAGCCGCGGCGCTAAAGC
TCCGCCGCGCCGAACTCCGCGCAGAACTCGACCATCTCCGCCAGAAACTCGCCACACTCGACGAAGCCGAGTCCACTGAT
CGCTTGCAGCAGGCACTCGAAACCAGCTCGTCCTCCGGCAGACGAGCATCAGGCAACAGCAAAAACAAAAAGGAGAAAAT
GCCACCGTTCAAGACGATACCGATCAGCGACAAAATCACCCTCTACATCGGCAGAAATTCCGCGAACAACGAGAAACTCA
CCTTCGGCTTCGCCAAACCCGACGACCTCTGGCTTCACGCCAGAGGCGCGTCAGGCTCGCACTGCGTGCTCAAAGGCGCG
ACCATGCGCCACACATCAGAAATTCAACGCGCCGCCGAAATCGCCGCGTGGCATTCATCGGCAAAGCACTCCGAACTGGT
ACCGGTCATCTGCACCCAGAAGAAATACCTCAAAAAAGACCATAAAACCCCCGGCAACGTCATCATCGAGCGGGAGCAGG
TGCTCATGGTCAAGCCGTTAAGAGAATGA

Upstream 100 bases:

>100_bases
AGCAGCAACCACTTTTGCTTTCTTCCTGCATTGCTATCTTGTGTTTAGATTATTTCAGGAAAATAGAGGAAAGAAAGCGC
CTCCGCAACCATTCAAGTCC

Downstream 100 bases:

>100_bases
TGAATTTTATGTAGTTGAACCAGTCGCGAAAATCGTTCATTGAACCTACAGAACTTATAACCCTTATTTTCTAAAAACCT
TACAAAATCAACAATCATGG

Product: fibronectin-binding protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 542; Mature: 542

Protein sequence:

>542_residues
MLRNYFTLYHAAAELHDRLADGYLFEIHSQQKNELTLAFVTQEGEHLQLIVTVRSPHFSLYTREGLNRKNRNTASIMTKV
YERQVTGVAISPADRQISLALDDGHALVLRMFSAETNMLLVRDGVIVDAFKDARKLENTPFGETTAGTPYFRALEQLASD
PALFRRKLEEGDSTVPLDRRLLAMLPGFDHKLVRRLLAITESDATEQLYSAFVAIFYDLASPTPCVIENPGEPPAFSLFP
PAPEGEATTFESVIDALNHYSRKMYRHLHLRERAVAMRRELTAKIGKLEKELAANAGHDPEEISQRNERYGHLLTGAIGA
IEPLDAAVTVPNLFAPGSPDVTIPLKRGLNLQENAAWYFTQAKKNRKKAAALKLRRAELRAELDHLRQKLATLDEAESTD
RLQQALETSSSSGRRASGNSKNKKEKMPPFKTIPISDKITLYIGRNSANNEKLTFGFAKPDDLWLHARGASGSHCVLKGA
TMRHTSEIQRAAEIAAWHSSAKHSELVPVICTQKKYLKKDHKTPGNVIIEREQVLMVKPLRE

Sequences:

>Translated_542_residues
MLRNYFTLYHAAAELHDRLADGYLFEIHSQQKNELTLAFVTQEGEHLQLIVTVRSPHFSLYTREGLNRKNRNTASIMTKV
YERQVTGVAISPADRQISLALDDGHALVLRMFSAETNMLLVRDGVIVDAFKDARKLENTPFGETTAGTPYFRALEQLASD
PALFRRKLEEGDSTVPLDRRLLAMLPGFDHKLVRRLLAITESDATEQLYSAFVAIFYDLASPTPCVIENPGEPPAFSLFP
PAPEGEATTFESVIDALNHYSRKMYRHLHLRERAVAMRRELTAKIGKLEKELAANAGHDPEEISQRNERYGHLLTGAIGA
IEPLDAAVTVPNLFAPGSPDVTIPLKRGLNLQENAAWYFTQAKKNRKKAAALKLRRAELRAELDHLRQKLATLDEAESTD
RLQQALETSSSSGRRASGNSKNKKEKMPPFKTIPISDKITLYIGRNSANNEKLTFGFAKPDDLWLHARGASGSHCVLKGA
TMRHTSEIQRAAEIAAWHSSAKHSELVPVICTQKKYLKKDHKTPGNVIIEREQVLMVKPLRE
>Mature_542_residues
MLRNYFTLYHAAAELHDRLADGYLFEIHSQQKNELTLAFVTQEGEHLQLIVTVRSPHFSLYTREGLNRKNRNTASIMTKV
YERQVTGVAISPADRQISLALDDGHALVLRMFSAETNMLLVRDGVIVDAFKDARKLENTPFGETTAGTPYFRALEQLASD
PALFRRKLEEGDSTVPLDRRLLAMLPGFDHKLVRRLLAITESDATEQLYSAFVAIFYDLASPTPCVIENPGEPPAFSLFP
PAPEGEATTFESVIDALNHYSRKMYRHLHLRERAVAMRRELTAKIGKLEKELAANAGHDPEEISQRNERYGHLLTGAIGA
IEPLDAAVTVPNLFAPGSPDVTIPLKRGLNLQENAAWYFTQAKKNRKKAAALKLRRAELRAELDHLRQKLATLDEAESTD
RLQQALETSSSSGRRASGNSKNKKEKMPPFKTIPISDKITLYIGRNSANNEKLTFGFAKPDDLWLHARGASGSHCVLKGA
TMRHTSEIQRAAEIAAWHSSAKHSELVPVICTQKKYLKKDHKTPGNVIIEREQVLMVKPLRE

Specific function: Unknown

COG id: COG1293

COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SDCCAG1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008532
- InterPro:   IPR008616 [H]

Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]

EC number: NA

Molecular weight: Translated: 60740; Mature: 60740

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRNYFTLYHAAAELHDRLADGYLFEIHSQQKNELTLAFVTQEGEHLQLIVTVRSPHFSL
CCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEEECCCCEEEEEEEEECCCEEE
YTREGLNRKNRNTASIMTKVYERQVTGVAISPADRQISLALDDGHALVLRMFSAETNMLL
EEHHCCCCCCCHHHHHHHHHHHHHHCCEEECCCCCEEEEEEECCCEEEEEEECCCCCEEE
VRDGVIVDAFKDARKLENTPFGETTAGTPYFRALEQLASDPALFRRKLEEGDSTVPLDRR
EECCEEEECHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHH
LLAMLPGFDHKLVRRLLAITESDATEQLYSAFVAIFYDLASPTPCVIENPGEPPAFSLFP
HHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEECCC
PAPEGEATTFESVIDALNHYSRKMYRHLHLRERAVAMRRELTAKIGKLEKELAANAGHDP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
EEISQRNERYGHLLTGAIGAIEPLDAAVTVPNLFAPGSPDVTIPLKRGLNLQENAAWYFT
HHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCEEEECCCCCCCCCCCEEEEE
QAKKNRKKAAALKLRRAELRAELDHLRQKLATLDEAESTDRLQQALETSSSSGRRASGNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCC
KNKKEKMPPFKTIPISDKITLYIGRNSANNEKLTFGFAKPDDLWLHARGASGSHCVLKGA
CCCHHCCCCCEEECCCCCEEEEEECCCCCCCEEEEECCCCCCEEEEECCCCCCEEEEECC
TMRHTSEIQRAAEIAAWHSSAKHSELVPVICTQKKYLKKDHKTPGNVIIEREQVLMVKPL
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHCCCCCCEEEECCCEEEECCC
RE
CC
>Mature Secondary Structure
MLRNYFTLYHAAAELHDRLADGYLFEIHSQQKNELTLAFVTQEGEHLQLIVTVRSPHFSL
CCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEEECCCCEEEEEEEEECCCEEE
YTREGLNRKNRNTASIMTKVYERQVTGVAISPADRQISLALDDGHALVLRMFSAETNMLL
EEHHCCCCCCCHHHHHHHHHHHHHHCCEEECCCCCEEEEEEECCCEEEEEEECCCCCEEE
VRDGVIVDAFKDARKLENTPFGETTAGTPYFRALEQLASDPALFRRKLEEGDSTVPLDRR
EECCEEEECHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHH
LLAMLPGFDHKLVRRLLAITESDATEQLYSAFVAIFYDLASPTPCVIENPGEPPAFSLFP
HHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEECCC
PAPEGEATTFESVIDALNHYSRKMYRHLHLRERAVAMRRELTAKIGKLEKELAANAGHDP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
EEISQRNERYGHLLTGAIGAIEPLDAAVTVPNLFAPGSPDVTIPLKRGLNLQENAAWYFT
HHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCEEEECCCCCCCCCCCEEEEE
QAKKNRKKAAALKLRRAELRAELDHLRQKLATLDEAESTDRLQQALETSSSSGRRASGNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCC
KNKKEKMPPFKTIPISDKITLYIGRNSANNEKLTFGFAKPDDLWLHARGASGSHCVLKGA
CCCHHCCCCCEEECCCCCEEEEEECCCCCCCEEEEECCCCCCEEEEECCCCCCEEEEECC
TMRHTSEIQRAAEIAAWHSSAKHSELVPVICTQKKYLKKDHKTPGNVIIEREQVLMVKPL
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHCCCCCCEEEECCCEEEECCC
RE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 9534248 [H]