| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is crtK-1 [H]
Identifier: 21673538
GI number: 21673538
Start: 691604
End: 691999
Strand: Reverse
Name: crtK-1 [H]
Synonym: CT0708
Alternate gene names: 21673538
Gene position: 691999-691604 (Counterclockwise)
Preceding gene: 21673539
Following gene: 21673537
Centisome position: 32.11
GC content: 54.8
Gene sequence:
>396_bases ATGCAAAGCTGGTATGACGGGCTTAACAAGCCGAAACTGACGCCACCCAACAAGGTGTTCTGGCCAGTTTGGTCAACGCT GTACGTGCTCATCGCCATAGCACTGATTGTCTATTTCCGGACTCCGGTCAAACCTCACGCCACGACGGTACTTGTCATTC TGGCTGCGCACTTTCTGGCAGGATTTTCATGGACTTCGATCTTTTTCGGAAAAAAGAAAATCTTGGCAGCCCTCATCGAT CTGCTCTTCATGGACGCGACGCTTGCCGCCATCATCGTCTTCTTCGCCAACACCAACCCGCTCGCGGCGGCGCTGCTCGC TCCCTACTTCTGCTGGAGCCTTCTGGCCACCTGGCTGAATTTTGGCATCTGGCGGCTCAATCCCGGCAAGCGCTAA
Upstream 100 bases:
>100_bases AGCGACAACCTGCAAATCACCTTCAATCCCTGACGGCGACTTCGGTTATCGGAACCATTTGCAGCGGCGTAACATTATTC CGGAAAAAGGAGAGTGAACC
Downstream 100 bases:
>100_bases ATCCACCGACCCGCGCTTGCCGGAAGCAGCCGAATCGCTACCTTACCGGCAGACCGGCAACGACAGTTACAATCTTTTGA ATTCACAGCGCATGAAATAC
Product: CrtK protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MQSWYDGLNKPKLTPPNKVFWPVWSTLYVLIAIALIVYFRTPVKPHATTVLVILAAHFLAGFSWTSIFFGKKKILAALID LLFMDATLAAIIVFFANTNPLAAALLAPYFCWSLLATWLNFGIWRLNPGKR
Sequences:
>Translated_131_residues MQSWYDGLNKPKLTPPNKVFWPVWSTLYVLIAIALIVYFRTPVKPHATTVLVILAAHFLAGFSWTSIFFGKKKILAALID LLFMDATLAAIIVFFANTNPLAAALLAPYFCWSLLATWLNFGIWRLNPGKR >Mature_131_residues MQSWYDGLNKPKLTPPNKVFWPVWSTLYVLIAIALIVYFRTPVKPHATTVLVILAAHFLAGFSWTSIFFGKKKILAALID LLFMDATLAAIIVFFANTNPLAAALLAPYFCWSLLATWLNFGIWRLNPGKR
Specific function: Unknown
COG id: COG3476
COG function: function code T; Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TspO/BZRP family [H]
Homologues:
Organism=Homo sapiens, GI74275350, Length=130, Percent_Identity=36.1538461538462, Blast_Score=80, Evalue=5e-16, Organism=Drosophila melanogaster, GI19920472, Length=134, Percent_Identity=35.8208955223881, Blast_Score=85, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004307 [H]
Pfam domain/function: PF03073 TspO_MBR [H]
EC number: NA
Molecular weight: Translated: 14786; Mature: 14786
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSWYDGLNKPKLTPPNKVFWPVWSTLYVLIAIALIVYFRTPVKPHATTVLVILAAHFLA CCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH GFSWTSIFFGKKKILAALIDLLFMDATLAAIIVFFANTNPLAAALLAPYFCWSLLATWLN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH FGIWRLNPGKR CCCEECCCCCC >Mature Secondary Structure MQSWYDGLNKPKLTPPNKVFWPVWSTLYVLIAIALIVYFRTPVKPHATTVLVILAAHFLA CCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH GFSWTSIFFGKKKILAALIDLLFMDATLAAIIVFFANTNPLAAALLAPYFCWSLLATWLN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH FGIWRLNPGKR CCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2747617 [H]