| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673537
Identifier: 21673537
GI number: 21673537
Start: 691069
End: 691512
Strand: Reverse
Name: 21673537
Synonym: CT0707
Alternate gene names: NA
Gene position: 691512-691069 (Counterclockwise)
Preceding gene: 21673538
Following gene: 21673535
Centisome position: 32.09
GC content: 60.14
Gene sequence:
>444_bases ATGAAATACTCGGAAGCACAACAAGGAAGGGTCTTCGTCATCCGGCTTGAAGATGGCGACATCTTTCACGAAGAGATCGA ACGATTTGCGAAGGAAAAAGGGATCGAGCGGGCCTACCTGAACGTGGTCGGCGGAGCGGACAAAGAGAGCAAACTGGTCG TCGGCCCGGAAGAGAGCCGCACTTACCCGGTCAATCCGATGGAGCACGAACTGTACGACGCGCACGAAATCGTCGGCACG GGCACCTTGTTCCCCGACGACACCAGCGCGCCGGTCGTGCACCTGCACATGGCCTGTGGCCGCGAGGAAAACACCGTGAC CGGCTGCGTGCGCAACGGCGTGAAAGTCTGGCACGTCATGGAGGTCATTCTGGTGGAACTGCTCGGCACCCAAGCCCGCC GCCTGCCCGACAAGGCAACCGGCTTCAAACTGCTCGTACCGTGA
Upstream 100 bases:
>100_bases AAGCGCTAAATCCACCGACCCGCGCTTGCCGGAAGCAGCCGAATCGCTACCTTACCGGCAGACCGGCAACGACAGTTACA ATCTTTTGAATTCACAGCGC
Downstream 100 bases:
>100_bases AGGCGAATTATGAATGCTGAATTATGAATTGTAAAAAGCATCCAACGCTTCTCTCACGAGTCCCATAACTCCCATCCGTC TCATTCTCGTTCCCCACCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MKYSEAQQGRVFVIRLEDGDIFHEEIERFAKEKGIERAYLNVVGGADKESKLVVGPEESRTYPVNPMEHELYDAHEIVGT GTLFPDDTSAPVVHLHMACGREENTVTGCVRNGVKVWHVMEVILVELLGTQARRLPDKATGFKLLVP
Sequences:
>Translated_147_residues MKYSEAQQGRVFVIRLEDGDIFHEEIERFAKEKGIERAYLNVVGGADKESKLVVGPEESRTYPVNPMEHELYDAHEIVGT GTLFPDDTSAPVVHLHMACGREENTVTGCVRNGVKVWHVMEVILVELLGTQARRLPDKATGFKLLVP >Mature_147_residues MKYSEAQQGRVFVIRLEDGDIFHEEIERFAKEKGIERAYLNVVGGADKESKLVVGPEESRTYPVNPMEHELYDAHEIVGT GTLFPDDTSAPVVHLHMACGREENTVTGCVRNGVKVWHVMEVILVELLGTQARRLPDKATGFKLLVP
Specific function: Unknown
COG id: COG1661
COG function: function code R; Predicted DNA-binding protein with PD1-like DNA-binding motif
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16459; Mature: 16459
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYSEAQQGRVFVIRLEDGDIFHEEIERFAKEKGIERAYLNVVGGADKESKLVVGPEESR CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEHHEECCCCCCCEEEECCCCCC TYPVNPMEHELYDAHEIVGTGTLFPDDTSAPVVHLHMACGREENTVTGCVRNGVKVWHVM CCCCCCCHHHHHHHHHHEECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCHHHHHHH EVILVELLGTQARRLPDKATGFKLLVP HHHHHHHHHHHHHHCCCCCCCEEEECC >Mature Secondary Structure MKYSEAQQGRVFVIRLEDGDIFHEEIERFAKEKGIERAYLNVVGGADKESKLVVGPEESR CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEHHEECCCCCCCEEEECCCCCC TYPVNPMEHELYDAHEIVGTGTLFPDDTSAPVVHLHMACGREENTVTGCVRNGVKVWHVM CCCCCCCHHHHHHHHHHEECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCHHHHHHH EVILVELLGTQARRLPDKATGFKLLVP HHHHHHHHHHHHHHCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA