| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is thiS
Identifier: 21673529
GI number: 21673529
Start: 684722
End: 685039
Strand: Reverse
Name: thiS
Synonym: CT0699
Alternate gene names: NA
Gene position: 685039-684722 (Counterclockwise)
Preceding gene: 21673530
Following gene: 21673528
Centisome position: 31.79
GC content: 55.35
Gene sequence:
>318_bases ATGGCCGGAGCAATAACTCTGGCATGTACAATTCGTTTTGAGGCCAACGCGGAACATGTATATTTGTCGTCAGGCACGAA ACAAACCGTTTATCACTATCCATTTCCCATGTCCACGATCCACATCACCCTGAACGGCGAGCGCAAGGAGGTGCCGGCGG GATCGACGGTCTCGGAGCTGCTGGTCATCGCGGACGCTGATCGTCAGCCGGTGGCTGTCGTGGTCAACGAACATATCGTG CGTCCCGACCAGCGAGACTCGTATATCTTGCAGGAGCGCGATCAGGTCGAAATTCTTGTTTTCGCTGGCGGAGGCTGA
Upstream 100 bases:
>100_bases CAATCGACGCTGTAGTAAAATCTTAGGCTAAAGCCCTGATTCATTGTATCTTATCCGCATACCCCAAACTGAAGTCCGGG GCAATTGTTTAAGAGCTTTA
Downstream 100 bases:
>100_bases TCGTCGCCAGCTTAAAGTCTGTTACTGTAACTCCATGGATTCACTTCGCTTAGGCACATACACCTTCTCATCCCGCCTGA TTCTCGGCACCGGCAAATTC
Product: ThiS protein
Products: NA
Alternate protein names: ThiS Thiamine-Biosynthesis; ThiS Protein
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MAGAITLACTIRFEANAEHVYLSSGTKQTVYHYPFPMSTIHITLNGERKEVPAGSTVSELLVIADADRQPVAVVVNEHIV RPDQRDSYILQERDQVEILVFAGGG
Sequences:
>Translated_105_residues MAGAITLACTIRFEANAEHVYLSSGTKQTVYHYPFPMSTIHITLNGERKEVPAGSTVSELLVIADADRQPVAVVVNEHIV RPDQRDSYILQERDQVEILVFAGGG >Mature_104_residues AGAITLACTIRFEANAEHVYLSSGTKQTVYHYPFPMSTIHITLNGERKEVPAGSTVSELLVIADADRQPVAVVVNEHIVR PDQRDSYILQERDQVEILVFAGGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11524; Mature: 11393
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGAITLACTIRFEANAEHVYLSSGTKQTVYHYPFPMSTIHITLNGERKEVPAGSTVSEL CCCEEEEEEEEEEECCCCEEEEECCCCCEEEECCCCCEEEEEEECCCCEECCCCCCCEEE LVIADADRQPVAVVVNEHIVRPDQRDSYILQERDQVEILVFAGGG EEEECCCCCCEEEEEECEECCCCCCCCEEECCCCCEEEEEEECCC >Mature Secondary Structure AGAITLACTIRFEANAEHVYLSSGTKQTVYHYPFPMSTIHITLNGERKEVPAGSTVSEL CCEEEEEEEEEEECCCCEEEEECCCCCEEEECCCCCEEEEEEECCCCEECCCCCCCEEE LVIADADRQPVAVVVNEHIVRPDQRDSYILQERDQVEILVFAGGG EEEECCCCCCEEEEEECEECCCCCCCCEEECCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA