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The map label for this gene is csmJ

Identifier: 21673483

GI number: 21673483

Start: 647930

End: 648607

Strand: Reverse

Name: csmJ

Synonym: CT0651

Alternate gene names: 21673483

Gene position: 648607-647930 (Counterclockwise)

Preceding gene: 21673484

Following gene: 21673482

Centisome position: 30.1

GC content: 56.05

Gene sequence:

>678_bases
ATGATTATCTACATCAATGACAAACCTTGCAACGCCAAGGTCGGAGACTTGCTGCTCAACACCGCAAAGCTCAATAAAGC
GCATATCGGCTACATCTGCGGCGGCAACGGCATCTGCCAGAGTTGCTTCGTCTATGTACTCGAAGGCGCTGAATGCCTCT
CTGAACCGGGCGAGGACGAAAAGGCTTTTATCTCCGACAAACTTTTTGCGGAGGGCGGACGCCTCGCCTGCCGCACCACC
ATCGTCAAGGAAGGAACGATCCGGGTGCTGACCCGTGCCGAAAAATTCCGGCGGATCGTGCTCGGCCTGAACGTCCCAGG
CTTCATCACCTACGCACAGACGATCGGCTACAATGTGACAAACAAACTCCCGTCCGGCGTTTCAAGCATCGTGTCGAGAG
TGCAGAGCGGGCGACTCAATCCTGTCGATACAATCGGCAAAATCGCCAGCGGCCTCAGCCCGGCATCACAGCTTGTGTAC
AATAATTTCATCGAGGCCTTTCCCTTCATGCAAGCACCAGTCAACATGGTGAGCGGTGTTGCCAAAAGCGCTATCGACAA
TGCGTCTGGCGCGCTGTGCACGATCAGCGGCGGTCGACTGCACCTGCCGGGTTCAACCTGCACCGCGCACGACAAACCGG
CGGAAGCCATCGAGCGCATTACCATCTCGGCAAAATAA

Upstream 100 bases:

>100_bases
CTCTTTGAAACCCATCGAACCGGAAGTATATTTCAAAGTAGGCAAACCTGCCCGCACTTATTTCTGAGAGTCATCGCTCA
CCAATGAAAATCTCACCGCC

Downstream 100 bases:

>100_bases
GCCACACGAACCTTTGACCAGCCCCCCCGGCGCCAACAACAGGCTCCGGGGAGCACTCGGCTTTCTGCAAAGCTTGTTTC
AGCAATCCTGACGATTTTAC

Product: chlorosome envelope protein J

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MIIYINDKPCNAKVGDLLLNTAKLNKAHIGYICGGNGICQSCFVYVLEGAECLSEPGEDEKAFISDKLFAEGGRLACRTT
IVKEGTIRVLTRAEKFRRIVLGLNVPGFITYAQTIGYNVTNKLPSGVSSIVSRVQSGRLNPVDTIGKIASGLSPASQLVY
NNFIEAFPFMQAPVNMVSGVAKSAIDNASGALCTISGGRLHLPGSTCTAHDKPAEAIERITISAK

Sequences:

>Translated_225_residues
MIIYINDKPCNAKVGDLLLNTAKLNKAHIGYICGGNGICQSCFVYVLEGAECLSEPGEDEKAFISDKLFAEGGRLACRTT
IVKEGTIRVLTRAEKFRRIVLGLNVPGFITYAQTIGYNVTNKLPSGVSSIVSRVQSGRLNPVDTIGKIASGLSPASQLVY
NNFIEAFPFMQAPVNMVSGVAKSAIDNASGALCTISGGRLHLPGSTCTAHDKPAEAIERITISAK
>Mature_225_residues
MIIYINDKPCNAKVGDLLLNTAKLNKAHIGYICGGNGICQSCFVYVLEGAECLSEPGEDEKAFISDKLFAEGGRLACRTT
IVKEGTIRVLTRAEKFRRIVLGLNVPGFITYAQTIGYNVTNKLPSGVSSIVSRVQSGRLNPVDTIGKIASGLSPASQLVY
NNFIEAFPFMQAPVNMVSGVAKSAIDNASGALCTISGGRLHLPGSTCTAHDKPAEAIERITISAK

Specific function: Could play a direct role in the oxidation or reduction of the quenching species formed in the chlorosome

COG id: NA

COG function: NA

Gene ontology:

Cell location: Chlorosome

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CSMJ_CHLTE (O68983)

Other databases:

- EMBL:   AF060077
- EMBL:   AE006470
- RefSeq:   NP_661548.1
- ProteinModelPortal:   O68983
- SMR:   O68983
- GeneID:   1006280
- GenomeReviews:   AE006470_GR
- KEGG:   cte:CT0651
- NMPDR:   fig|194439.1.peg.642
- TIGR:   CT0651
- HOGENOM:   HBG405754
- OMA:   HIGYICG
- ProtClustDB:   CLSK637415
- BioCyc:   CTEP194439:CT_0651-MONOMER
- GO:   GO:0046858
- GO:   GO:0015979
- GO:   GO:0006810
- InterPro:   IPR012675
- InterPro:   IPR001041
- Gene3D:   G3DSA:3.10.20.30

Pfam domain/function: PF00111 Fer2; SSF54292 Ferredoxin

EC number: NA

Molecular weight: Translated: 23896; Mature: 23896

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: PS00197 2FE2S_FER_1; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIYINDKPCNAKVGDLLLNTAKLNKAHIGYICGGNGICQSCFVYVLEGAECLSEPGEDE
CEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCHHHHCCCCCCC
KAFISDKLFAEGGRLACRTTIVKEGTIRVLTRAEKFRRIVLGLNVPGFITYAQTIGYNVT
HHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
NKLPSGVSSIVSRVQSGRLNPVDTIGKIASGLSPASQLVYNNFIEAFPFMQAPVNMVSGV
CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH
AKSAIDNASGALCTISGGRLHLPGSTCTAHDKPAEAIERITISAK
HHHHHCCCCCCEEEECCCEEECCCCCCCCCCCHHHHHHHEEECCC
>Mature Secondary Structure
MIIYINDKPCNAKVGDLLLNTAKLNKAHIGYICGGNGICQSCFVYVLEGAECLSEPGEDE
CEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCHHHHCCCCCCC
KAFISDKLFAEGGRLACRTTIVKEGTIRVLTRAEKFRRIVLGLNVPGFITYAQTIGYNVT
HHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
NKLPSGVSSIVSRVQSGRLNPVDTIGKIASGLSPASQLVYNNFIEAFPFMQAPVNMVSGV
CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH
AKSAIDNASGALCTISGGRLHLPGSTCTAHDKPAEAIERITISAK
HHHHHCCCCCCEEEECCCEEECCCCCCCCCCCHHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11148041; 12093901