| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is ald [H]
Identifier: 21673482
GI number: 21673482
Start: 646604
End: 647737
Strand: Reverse
Name: ald [H]
Synonym: CT0650
Alternate gene names: 21673482
Gene position: 647737-646604 (Counterclockwise)
Preceding gene: 21673483
Following gene: 21673480
Centisome position: 30.06
GC content: 58.73
Gene sequence:
>1134_bases ATGAGCGTCTCCATCGCCATTCCAAAAGAGCGTGCCCAGGACGAACGGCGCGTTGCCATTTCGCCGGCTGGAGTGCAGAT ACTGGTCGAACAGGGTATCCGGGTGGTGGTAGAAAGCAACGCGGGCTGCTTCTGCAATTTCCATGATCAGGATTATGCCG AAGCCGGTGCGATCATCGTCACCTCACCTGAGGAACTGTACCCGCAGGCCAACGTCATCGTCAAGGTCTCGCCTCCGCAA CCCGAAGAGCTGCAACTCCTTTTACCCGGCCAGATGCTCATCTCGGCGGTGCATCTCGGCACCGTCAGCCGCCAGATGCT CAAGACGCTGATCGACAAGAACATCACCGCGCTCGGCTTCGAGTTCATCGAAACGAGGGATGGCGAGCTGCCCATCGTCA GAACGCTGAGCGAAATCGCCGGATCGCTGGCCATCCAGACGGCGGCGAAATACCTCGAAACCGGCTATGGCGGCAGCGGT ATTCTGCTTGGCGGCATCGCGGGCGTACCACCCGCACACGTCACGATCATCGGCGCGGGCACGGTCGGCCTGTTCGCCGC GCAGGACGCGCTCGGCCTGGGAGCGCAGGTAACGGTCATCGACAAGGAGATCAACCGGCTGCGGCGATTCGAAGCGTTCT TCAACCGACACCTGGTGACGGCCATCGCCAACGAACACTACATTTCGCAGCTCGCGAAAATGTCCGATGTGATGATCGGC GCGCTCAGCCCCAAGCTGAAACTGAACAAACCGCTGGTGAGCGAGCAGGTGGTCAAAACCATGAAACCCGGGTCGGTGAT CATCGACGTTTCGATCGACCAGGGAGCCTGTTTCGCCACCAGCCGTCACACAACGCACACCAACCCGATTTACGTCAAGT ACGGTGTAACGCACTACTGCGTACCAAACATCCCGTCGGCAGTAGCCAAAACTGCCACGTTCGCGCTGACCAACACGCTT CTGCCATTCCTGCTGAAGCTGAACGCGCACCAGACCATTCCGGAAATTCTCTGGAACAGCCACAGCCTGCGCAAGGGCAC CTACCTTTACAAAGGCTACATCACCAAGAAAATCCTCGCCGAACTCACCGATCTTCCTTTCCGCGAAATCGACATGCTGC TCGCGACTGCATAA
Upstream 100 bases:
>100_bases GATTTTACTGACGATGGGCTACTCATCCGATTTTGGAACTATCGAATTCGAACTCGGAGTCAAAACTCTCGAACGCTGGT TGCTCAAACCGGAAAAGACG
Downstream 100 bases:
>100_bases AAAAGGGCGACCACAAGAACCGCCCCAACATGATCCCATCCGCCAATTTCAGGTCGTCCGCGCACTTCCCAACTCATAGG TAATCGAGCGCTTTCCCCAA
Product: alanine dehydrogenase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MSVSIAIPKERAQDERRVAISPAGVQILVEQGIRVVVESNAGCFCNFHDQDYAEAGAIIVTSPEELYPQANVIVKVSPPQ PEELQLLLPGQMLISAVHLGTVSRQMLKTLIDKNITALGFEFIETRDGELPIVRTLSEIAGSLAIQTAAKYLETGYGGSG ILLGGIAGVPPAHVTIIGAGTVGLFAAQDALGLGAQVTVIDKEINRLRRFEAFFNRHLVTAIANEHYISQLAKMSDVMIG ALSPKLKLNKPLVSEQVVKTMKPGSVIIDVSIDQGACFATSRHTTHTNPIYVKYGVTHYCVPNIPSAVAKTATFALTNTL LPFLLKLNAHQTIPEILWNSHSLRKGTYLYKGYITKKILAELTDLPFREIDMLLATA
Sequences:
>Translated_377_residues MSVSIAIPKERAQDERRVAISPAGVQILVEQGIRVVVESNAGCFCNFHDQDYAEAGAIIVTSPEELYPQANVIVKVSPPQ PEELQLLLPGQMLISAVHLGTVSRQMLKTLIDKNITALGFEFIETRDGELPIVRTLSEIAGSLAIQTAAKYLETGYGGSG ILLGGIAGVPPAHVTIIGAGTVGLFAAQDALGLGAQVTVIDKEINRLRRFEAFFNRHLVTAIANEHYISQLAKMSDVMIG ALSPKLKLNKPLVSEQVVKTMKPGSVIIDVSIDQGACFATSRHTTHTNPIYVKYGVTHYCVPNIPSAVAKTATFALTNTL LPFLLKLNAHQTIPEILWNSHSLRKGTYLYKGYITKKILAELTDLPFREIDMLLATA >Mature_376_residues SVSIAIPKERAQDERRVAISPAGVQILVEQGIRVVVESNAGCFCNFHDQDYAEAGAIIVTSPEELYPQANVIVKVSPPQP EELQLLLPGQMLISAVHLGTVSRQMLKTLIDKNITALGFEFIETRDGELPIVRTLSEIAGSLAIQTAAKYLETGYGGSGI LLGGIAGVPPAHVTIIGAGTVGLFAAQDALGLGAQVTVIDKEINRLRRFEAFFNRHLVTAIANEHYISQLAKMSDVMIGA LSPKLKLNKPLVSEQVVKTMKPGSVIIDVSIDQGACFATSRHTTHTNPIYVKYGVTHYCVPNIPSAVAKTATFALTNTLL PFLLKLNAHQTIPEILWNSHSLRKGTYLYKGYITKKILAELTDLPFREIDMLLATA
Specific function: This enzyme is a key factor in the assimilation of L- alanine as an energy source through the tricarboxylic acid cycle during sporulation [H]
COG id: COG0686
COG function: function code E; Alanine dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=351, Percent_Identity=29.6296296296296, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI122939153, Length=351, Percent_Identity=29.6296296296296, Blast_Score=117, Evalue=2e-26, Organism=Escherichia coli, GI1787887, Length=293, Percent_Identity=31.0580204778157, Blast_Score=105, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17550456, Length=355, Percent_Identity=27.887323943662, Blast_Score=136, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 - InterPro: IPR008141 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.4.1.1 [H]
Molecular weight: Translated: 40848; Mature: 40717
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: PS00837 ALADH_PNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSIAIPKERAQDERRVAISPAGVQILVEQGIRVVVESNAGCFCNFHDQDYAEAGAIIV CEEEEECCHHHCCCCCEEEECCCCCEEEEECCCEEEEECCCCEEEECCCCCHHHCCEEEE TSPEELYPQANVIVKVSPPQPEELQLLLPGQMLISAVHLGTVSRQMLKTLIDKNITALGF ECCHHHCCCCCEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCH EFIETRDGELPIVRTLSEIAGSLAIQTAAKYLETGYGGSGILLGGIAGVPPAHVTIIGAG HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEEECC TVGLFAAQDALGLGAQVTVIDKEINRLRRFEAFFNRHLVTAIANEHYISQLAKMSDVMIG CHHHEEHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ALSPKLKLNKPLVSEQVVKTMKPGSVIIDVSIDQGACFATSRHTTHTNPIYVKYGVTHYC CCCCCEECCCCHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCCCCEEEEEECCEEEE VPNIPSAVAKTATFALTNTLLPFLLKLNAHQTIPEILWNSHSLRKGTYLYKGYITKKILA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCEEEHHHHHHHHHH ELTDLPFREIDMLLATA HHHCCCHHHHHHHHHCC >Mature Secondary Structure SVSIAIPKERAQDERRVAISPAGVQILVEQGIRVVVESNAGCFCNFHDQDYAEAGAIIV EEEEECCHHHCCCCCEEEECCCCCEEEEECCCEEEEECCCCEEEECCCCCHHHCCEEEE TSPEELYPQANVIVKVSPPQPEELQLLLPGQMLISAVHLGTVSRQMLKTLIDKNITALGF ECCHHHCCCCCEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCH EFIETRDGELPIVRTLSEIAGSLAIQTAAKYLETGYGGSGILLGGIAGVPPAHVTIIGAG HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEEECC TVGLFAAQDALGLGAQVTVIDKEINRLRRFEAFFNRHLVTAIANEHYISQLAKMSDVMIG CHHHEEHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ALSPKLKLNKPLVSEQVVKTMKPGSVIIDVSIDQGACFATSRHTTHTNPIYVKYGVTHYC CCCCCEECCCCHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCCCCEEEEEECCEEEE VPNIPSAVAKTATFALTNTLLPFLLKLNAHQTIPEILWNSHSLRKGTYLYKGYITKKILA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCEEEHHHHHHHHHH ELTDLPFREIDMLLATA HHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2340274 [H]