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The map label for this gene is glcD [H]

Identifier: 21673400

GI number: 21673400

Start: 572212

End: 573696

Strand: Reverse

Name: glcD [H]

Synonym: CT0565

Alternate gene names: 21673400

Gene position: 573696-572212 (Counterclockwise)

Preceding gene: 21673401

Following gene: 21673399

Centisome position: 26.62

GC content: 62.69

Gene sequence:

>1485_bases
ATGAACTTCAAAAATGAACCAGCAGCCATTGCGGGCTTTCTCGAAGACACGAGCAACCTGAAAAACGGCTGGACGCCGGG
CGTCTTTTTCCCGGAAACGCCGGAGGAGGTGGCCTCGCTGTTGCGCGAAGCTTGCGCCGACGGACGCCGCTACACCATCG
CGGGCAACGGCACCGGCACCACCGGCGCGCGGATCCCGTTCGGCGACTACGTAATTGCGATGCAGAAGCTCGACCGCATC
GGCGAAGTCGAGCCGACAATCGACGGACGAGCGCTGCTGCGCGTGCAGGGCGGTGCGCTGTTGCAGGATGTGCAGGCGAA
AGCGGCGGCGGCAGGCTGGTTCTATCCGCCCGATCCGACCGAGAAAACCTGCTTCATCGGCAGCACCATCTCGAACAACT
CCACAGGCTCGCGCTCGCTCAAATACGGCCCGACGCGCAATCACGTGCAGGCACTGCAAATCGCGCTGCCGCAGGGCGAT
TTGCTGGAGATCACGCGCGGCCAGCACCTCGCCGACGCAGCGGGAAACTTCACACTTGACCTGCCGCTTGCCGGGCGCGT
GACGTTCCGGCTTCCGGATTACACGATGCCGAAGACCTCGAAGCACAACGCGGGCTACTGGTCGAAGCCGGGCATGGATC
TGGTCGATCTCTTCATCGGCTCTGAGGGCACGCTCGGCGTCATCGTCGAAGCCACGCTGCTCTTGCGCCCCGCGCCGGAG
CGGGTGATTGCCTGCCTCGCCTGGTTCAGAAGCGAGGAGGAACTGCTCGGCTTCGTCGGCGAGGCCCGCGCCGGAAGCGG
CGGCGTCAGCCCGCGCGCGCTCGAACTCTTCGACCGTCGGGCGCTGGAGTTTCTCCGGCAAAGCTATCCCGACATTGCAA
AGGAAATGGCGGGCGCGGTCTATTTCGAGGAGGAGACAACCGTCGAGCGCGAGGAGGCCTGCCTCGAAGCGTGGCTGGAA
CTGATGGAACAGTGCGGCTCGCCAGTCGAGAAGAGCTGGGCGGCACTCGACAGCGAGGGGTTGCAGAAGCTCCGCGACTT
CCGCCACCAGCTGCCGGTACTGGTCAACGAGTGGCTCAGCCGCCAGTCGGAGAGCAAGGTGAGCACCGACATGGCACTGC
CCGACGAGCGCTTCGCCGAGCTGTTCCGGCTCTACCGCGACGCCTGCGACCGCGAGGGATTCACCTACATCATCTTCGGC
CACATCGGCAACGCCCACCTGCACCTGAACATTCTGCCGCACAATCACGAAGAGTTCGTGCGCGCCAAAACGCTCTACCG
CCAGCTCGTCTCGAAAGTGCTCGCGATGGGCGGCACACTGTCGGCAGAGCACGGCATCGGCAAACTCAAGAGCGAATATC
TGGTACAAATGTACGGCCGCAAAGGCATCAGGGAAATGGTGCGTGTAAAAAAAGCGTTCGACCCTTATCTTGTGCTCAAT
GTCGGAAACATGATTCCGGCAGAATACTACGAATCCGAAACCTGA

Upstream 100 bases:

>100_bases
AAAAGCTGAACGATTCGCTAAACACGAAACGCCCCGCCGCGAAAACAGCAATCGACTCTACCAGCACTGCGCCGCAGAGC
GATCTGGAGGGTGGAGACTG

Downstream 100 bases:

>100_bases
GAGAGAACGCGGTGTCCAAAAAACAAGGCAAGCCGGAATACGTCACGGCGATCAGCAACCGCAAGGCCCGGTTCGAGTAC
GAAATTCTCGACACGATCGA

Product: oxidoreductase, FAD-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 494; Mature: 494

Protein sequence:

>494_residues
MNFKNEPAAIAGFLEDTSNLKNGWTPGVFFPETPEEVASLLREACADGRRYTIAGNGTGTTGARIPFGDYVIAMQKLDRI
GEVEPTIDGRALLRVQGGALLQDVQAKAAAAGWFYPPDPTEKTCFIGSTISNNSTGSRSLKYGPTRNHVQALQIALPQGD
LLEITRGQHLADAAGNFTLDLPLAGRVTFRLPDYTMPKTSKHNAGYWSKPGMDLVDLFIGSEGTLGVIVEATLLLRPAPE
RVIACLAWFRSEEELLGFVGEARAGSGGVSPRALELFDRRALEFLRQSYPDIAKEMAGAVYFEEETTVEREEACLEAWLE
LMEQCGSPVEKSWAALDSEGLQKLRDFRHQLPVLVNEWLSRQSESKVSTDMALPDERFAELFRLYRDACDREGFTYIIFG
HIGNAHLHLNILPHNHEEFVRAKTLYRQLVSKVLAMGGTLSAEHGIGKLKSEYLVQMYGRKGIREMVRVKKAFDPYLVLN
VGNMIPAEYYESET

Sequences:

>Translated_494_residues
MNFKNEPAAIAGFLEDTSNLKNGWTPGVFFPETPEEVASLLREACADGRRYTIAGNGTGTTGARIPFGDYVIAMQKLDRI
GEVEPTIDGRALLRVQGGALLQDVQAKAAAAGWFYPPDPTEKTCFIGSTISNNSTGSRSLKYGPTRNHVQALQIALPQGD
LLEITRGQHLADAAGNFTLDLPLAGRVTFRLPDYTMPKTSKHNAGYWSKPGMDLVDLFIGSEGTLGVIVEATLLLRPAPE
RVIACLAWFRSEEELLGFVGEARAGSGGVSPRALELFDRRALEFLRQSYPDIAKEMAGAVYFEEETTVEREEACLEAWLE
LMEQCGSPVEKSWAALDSEGLQKLRDFRHQLPVLVNEWLSRQSESKVSTDMALPDERFAELFRLYRDACDREGFTYIIFG
HIGNAHLHLNILPHNHEEFVRAKTLYRQLVSKVLAMGGTLSAEHGIGKLKSEYLVQMYGRKGIREMVRVKKAFDPYLVLN
VGNMIPAEYYESET
>Mature_494_residues
MNFKNEPAAIAGFLEDTSNLKNGWTPGVFFPETPEEVASLLREACADGRRYTIAGNGTGTTGARIPFGDYVIAMQKLDRI
GEVEPTIDGRALLRVQGGALLQDVQAKAAAAGWFYPPDPTEKTCFIGSTISNNSTGSRSLKYGPTRNHVQALQIALPQGD
LLEITRGQHLADAAGNFTLDLPLAGRVTFRLPDYTMPKTSKHNAGYWSKPGMDLVDLFIGSEGTLGVIVEATLLLRPAPE
RVIACLAWFRSEEELLGFVGEARAGSGGVSPRALELFDRRALEFLRQSYPDIAKEMAGAVYFEEETTVEREEACLEAWLE
LMEQCGSPVEKSWAALDSEGLQKLRDFRHQLPVLVNEWLSRQSESKVSTDMALPDERFAELFRLYRDACDREGFTYIIFG
HIGNAHLHLNILPHNHEEFVRAKTLYRQLVSKVLAMGGTLSAEHGIGKLKSEYLVQMYGRKGIREMVRVKKAFDPYLVLN
VGNMIPAEYYESET

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI37595754, Length=475, Percent_Identity=27.5789473684211, Blast_Score=143, Evalue=3e-34,
Organism=Homo sapiens, GI37595756, Length=475, Percent_Identity=27.5789473684211, Blast_Score=139, Evalue=6e-33,
Organism=Homo sapiens, GI119964728, Length=488, Percent_Identity=23.3606557377049, Blast_Score=103, Evalue=5e-22,
Organism=Escherichia coli, GI1787977, Length=505, Percent_Identity=25.9405940594059, Blast_Score=112, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI17534361, Length=503, Percent_Identity=26.2425447316103, Blast_Score=138, Evalue=7e-33,
Organism=Caenorhabditis elegans, GI71992373, Length=480, Percent_Identity=24.7916666666667, Blast_Score=115, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI71992381, Length=440, Percent_Identity=24.5454545454545, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI71992392, Length=385, Percent_Identity=25.4545454545455, Blast_Score=112, Evalue=4e-25,
Organism=Saccharomyces cerevisiae, GI6320023, Length=496, Percent_Identity=23.7903225806452, Blast_Score=116, Evalue=8e-27,
Organism=Drosophila melanogaster, GI18921117, Length=469, Percent_Identity=25.7995735607676, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24639277, Length=469, Percent_Identity=25.7995735607676, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24639275, Length=469, Percent_Identity=25.7995735607676, Blast_Score=120, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 54844; Mature: 54844

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFKNEPAAIAGFLEDTSNLKNGWTPGVFFPETPEEVASLLREACADGRRYTIAGNGTGT
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC
TGARIPFGDYVIAMQKLDRIGEVEPTIDGRALLRVQGGALLQDVQAKAAAAGWFYPPDPT
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCC
EKTCFIGSTISNNSTGSRSLKYGPTRNHVQALQIALPQGDLLEITRGQHLADAAGNFTLD
CCEEEEECCCCCCCCCCCCCCCCCCHHHHEEEEEECCCCCEEEECCCCCHHHCCCCEEEE
LPLAGRVTFRLPDYTMPKTSKHNAGYWSKPGMDLVDLFIGSEGTLGVIVEATLLLRPAPE
ECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEHEEEEHHHCCCCHH
RVIACLAWFRSEEELLGFVGEARAGSGGVSPRALELFDRRALEFLRQSYPDIAKEMAGAV
HHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCEE
YFEEETTVEREEACLEAWLELMEQCGSPVEKSWAALDSEGLQKLRDFRHQLPVLVNEWLS
EECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHC
RQSESKVSTDMALPDERFAELFRLYRDACDREGFTYIIFGHIGNAHLHLNILPHNHEEFV
CCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEECCCHHHHH
RAKTLYRQLVSKVLAMGGTLSAEHGIGKLKSEYLVQMYGRKGIREMVRVKKAFDPYLVLN
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
VGNMIPAEYYESET
CCCCCCHHHHCCCC
>Mature Secondary Structure
MNFKNEPAAIAGFLEDTSNLKNGWTPGVFFPETPEEVASLLREACADGRRYTIAGNGTGT
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC
TGARIPFGDYVIAMQKLDRIGEVEPTIDGRALLRVQGGALLQDVQAKAAAAGWFYPPDPT
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCC
EKTCFIGSTISNNSTGSRSLKYGPTRNHVQALQIALPQGDLLEITRGQHLADAAGNFTLD
CCEEEEECCCCCCCCCCCCCCCCCCHHHHEEEEEECCCCCEEEECCCCCHHHCCCCEEEE
LPLAGRVTFRLPDYTMPKTSKHNAGYWSKPGMDLVDLFIGSEGTLGVIVEATLLLRPAPE
ECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEHEEEEHHHCCCCHH
RVIACLAWFRSEEELLGFVGEARAGSGGVSPRALELFDRRALEFLRQSYPDIAKEMAGAV
HHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCEE
YFEEETTVEREEACLEAWLELMEQCGSPVEKSWAALDSEGLQKLRDFRHQLPVLVNEWLS
EECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHC
RQSESKVSTDMALPDERFAELFRLYRDACDREGFTYIIFGHIGNAHLHLNILPHNHEEFV
CCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEECCCHHHHH
RAKTLYRQLVSKVLAMGGTLSAEHGIGKLKSEYLVQMYGRKGIREMVRVKKAFDPYLVLN
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
VGNMIPAEYYESET
CCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]