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The map label for this gene is ycdQ [C]

Identifier: 21673371

GI number: 21673371

Start: 543073

End: 544107

Strand: Direct

Name: ycdQ [C]

Synonym: CT0536

Alternate gene names: 21673371

Gene position: 543073-544107 (Clockwise)

Preceding gene: 21673370

Following gene: 21673379

Centisome position: 25.2

GC content: 61.35

Gene sequence:

>1035_bases
ATGCAAGCATCGGGCAAAACCACACCGGCGGTGACGGTTATCATTCCGCATCTCAGGAACCGCCCGACGCTCGATGCCTG
CCTCGATGCTCTTCGCAAAACTACCTTCCGCGACTTCGCCGTGCTCGTCGTCGATAACGGCGGCGACGCATCTGATCTCG
CGGGTCTCGAATCCTGCTATCCCGAAATCTCGGTTCTCCACCTGCCCGAAAACGCCGGATATGCTGGTGGCTGCAACGCG
GGTCTGAAACTTGTGATTTCGCCGTATGTCGTTTTTTTGAATGATGATACCGTCGTCGAGCCGGAGTGGCTTGGTTGCCT
CGTCGAGGCGGCGGAATGCGATCCGCAAATTGCCGCGTTGCAGCCGAAGATTCTTTCCCTGCCAGAGCATCGGCAGGGCC
GGCGAGTGTTCGATTACGCCGGAGCAGCAGGCGGGCTGATCGACCGGCTCGGATTTCCGTATTGTCTTGGTCGAAGCTTC
GGCGGGCGGGAGGTGGACGCTGGGCAGTACGACGAGATGTGCGACATTTTCTGGGCGTCGGGTGTGGCGCTCTTCGTGCA
GCGTGAGGTGGCCGAAAAGCTCGGCGGCTTCGAGACGGAATTTTTCATGCACATGGAGGAGATCGATCTCTGCTGGCGGA
TGCTACTGGCGGGCTACCGGGTGCGGTCAGTGCCACAATCGGTGGTGTGGCATGAGGGCGGCGCGTCGCTCTCGGAAGGT
TCGCCGCTGAAGGTCTACTACAACCACCGCAACGCCATGCTTACGCTGCTGCGCAACCGGAGCACCGTGCCGCTCGTGCT
GCTGCTGCCACTGCGTATAGCGCTCGAAGCGGCGGCAGTGCTCTATTATCTCGCGGGTGGAAAAGCTGGAGTGATGCGGG
CTGGGCAGGTGGCGCGGGCGTTCGCCGATGTGCTGCGGAGATTGCCGGAAACCCTCCGGCAGCGGCGGGAAATTCAGCGG
TCGAGACGCGTCAGCGACCGGGAGCTTTTCCGCAATACGCCGCTCTCGATTTTCCTTCCGCGTCGTCCAGATTAG

Upstream 100 bases:

>100_bases
GCGGAGCTGGCCGCCGGGTTCTGGAAATCGCTGCGGTGATCCACGTGGCGGAATCCCTTCCAGTGCTCCGCCATTTCCAA
GCACTTCGATTCTTTCAACC

Downstream 100 bases:

>100_bases
CCTTTGGCCCGCGCTTCGCAGTAGCTTCTGATTGCTCTCAGGATGGTCGGCAGATCCTGGCTCTGCACGAAACTCACCAC
GAACTGCGGTGCGAAAAAGT

Product: glycosyl transferase

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MQASGKTTPAVTVIIPHLRNRPTLDACLDALRKTTFRDFAVLVVDNGGDASDLAGLESCYPEISVLHLPENAGYAGGCNA
GLKLVISPYVVFLNDDTVVEPEWLGCLVEAAECDPQIAALQPKILSLPEHRQGRRVFDYAGAAGGLIDRLGFPYCLGRSF
GGREVDAGQYDEMCDIFWASGVALFVQREVAEKLGGFETEFFMHMEEIDLCWRMLLAGYRVRSVPQSVVWHEGGASLSEG
SPLKVYYNHRNAMLTLLRNRSTVPLVLLLPLRIALEAAAVLYYLAGGKAGVMRAGQVARAFADVLRRLPETLRQRREIQR
SRRVSDRELFRNTPLSIFLPRRPD

Sequences:

>Translated_344_residues
MQASGKTTPAVTVIIPHLRNRPTLDACLDALRKTTFRDFAVLVVDNGGDASDLAGLESCYPEISVLHLPENAGYAGGCNA
GLKLVISPYVVFLNDDTVVEPEWLGCLVEAAECDPQIAALQPKILSLPEHRQGRRVFDYAGAAGGLIDRLGFPYCLGRSF
GGREVDAGQYDEMCDIFWASGVALFVQREVAEKLGGFETEFFMHMEEIDLCWRMLLAGYRVRSVPQSVVWHEGGASLSEG
SPLKVYYNHRNAMLTLLRNRSTVPLVLLLPLRIALEAAAVLYYLAGGKAGVMRAGQVARAFADVLRRLPETLRQRREIQR
SRRVSDRELFRNTPLSIFLPRRPD
>Mature_344_residues
MQASGKTTPAVTVIIPHLRNRPTLDACLDALRKTTFRDFAVLVVDNGGDASDLAGLESCYPEISVLHLPENAGYAGGCNA
GLKLVISPYVVFLNDDTVVEPEWLGCLVEAAECDPQIAALQPKILSLPEHRQGRRVFDYAGAAGGLIDRLGFPYCLGRSF
GGREVDAGQYDEMCDIFWASGVALFVQREVAEKLGGFETEFFMHMEEIDLCWRMLLAGYRVRSVPQSVVWHEGGASLSEG
SPLKVYYNHRNAMLTLLRNRSTVPLVLLLPLRIALEAAAVLYYLAGGKAGVMRAGQVARAFADVLRRLPETLRQRREIQR
SRRVSDRELFRNTPLSIFLPRRPD

Specific function: Unknown

COG id: COG1216

COG function: function code R; Predicted glycosyltransferases

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 38122; Mature: 38122

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQASGKTTPAVTVIIPHLRNRPTLDACLDALRKTTFRDFAVLVVDNGGDASDLAGLESCY
CCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHC
PEISVLHLPENAGYAGGCNAGLKLVISPYVVFLNDDTVVEPEWLGCLVEAAECDPQIAAL
CCCEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCEECHHHHHHHHHHHHCCCCHHHC
QPKILSLPEHRQGRRVFDYAGAAGGLIDRLGFPYCLGRSFGGREVDAGQYDEMCDIFWAS
CCHHHCCCCCCCCCEEEHHCCCCCHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHH
GVALFVQREVAEKLGGFETEFFMHMEEIDLCWRMLLAGYRVRSVPQSVVWHEGGASLSEG
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHEEECCCCCCCCC
SPLKVYYNHRNAMLTLLRNRSTVPLVLLLPLRIALEAAAVLYYLAGGKAGVMRAGQVARA
CCEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
FADVLRRLPETLRQRREIQRSRRVSDRELFRNTPLSIFLPRRPD
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEECCCCC
>Mature Secondary Structure
MQASGKTTPAVTVIIPHLRNRPTLDACLDALRKTTFRDFAVLVVDNGGDASDLAGLESCY
CCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHC
PEISVLHLPENAGYAGGCNAGLKLVISPYVVFLNDDTVVEPEWLGCLVEAAECDPQIAAL
CCCEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCEECHHHHHHHHHHHHCCCCHHHC
QPKILSLPEHRQGRRVFDYAGAAGGLIDRLGFPYCLGRSFGGREVDAGQYDEMCDIFWAS
CCHHHCCCCCCCCCEEEHHCCCCCHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHH
GVALFVQREVAEKLGGFETEFFMHMEEIDLCWRMLLAGYRVRSVPQSVVWHEGGASLSEG
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHEEECCCCCCCCC
SPLKVYYNHRNAMLTLLRNRSTVPLVLLLPLRIALEAAAVLYYLAGGKAGVMRAGQVARA
CCEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
FADVLRRLPETLRQRREIQRSRRVSDRELFRNTPLSIFLPRRPD
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7836301 [H]