| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673369
Identifier: 21673369
GI number: 21673369
Start: 541648
End: 542211
Strand: Direct
Name: 21673369
Synonym: CT0534
Alternate gene names: NA
Gene position: 541648-542211 (Clockwise)
Preceding gene: 21673367
Following gene: 21673370
Centisome position: 25.14
GC content: 53.19
Gene sequence:
>564_bases GTGCTCTACGTTGTCGGTGGCATGGGCGTTGTCGTCTGGCGCGGTGCGAGCAAAGGCGAGTGGGTCGAAATGTACCTCGC GGGCGGGGATCTGAAAAAATCCCTGAAGTGGGGTGGCATCGCTGGCGGCATCCTTTTCGTGCTCGACCTTGTCAACACGG TGATCTACTACTCGAAAGGCGCGCCGCCGATGGTTGACATGCTTGGCATTCTGGTCAACATGAATTTTCTTTTTCTTTTC CCGATTCTCGTGCTCGCCGAGGAGTTCCTGTGGCGTGGGCTTATGCTCTCATCGATGGTCGAGAAAGGATTCAATCCCCA CCTGAGTGTTTTCGTGACTGCCCTGTGCTACGTCCTGAACCACTACGCTGTTGCGCCGGTCGGCATGTACGAGCGCGGGC TGATGGCGATGATGGCTTTTCCGATTGGCATTCTTGGCGGTTATATTGTGCTCAAATCGAAGAACGTCTGGGGAAGCGTA CTGGTACACATGATTACCATGTTTTCGATGGTGCTCGATATTTTTGTCATCCCCAATGTGGTGCCTTCACTATTTCATCT ATGA
Upstream 100 bases:
>100_bases GCTGAACGAGCGTTTCAAACTCGCGTTCGGGCTGACGGCTCTCATCTGGATCACCGGCCTTGTCGGTCATTTCACCCCGC TGAAGGAGTGGCCCGCGCTA
Downstream 100 bases:
>100_bases AAGAGAACCGAATTACCCGGCTGGTGAAGCAGGACAAGAAGCTGCTCATCGCCTATTATATGCCTGAATTTCCCGTGCCG GGCGCTACTTTGCCTGTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MLYVVGGMGVVVWRGASKGEWVEMYLAGGDLKKSLKWGGIAGGILFVLDLVNTVIYYSKGAPPMVDMLGILVNMNFLFLF PILVLAEEFLWRGLMLSSMVEKGFNPHLSVFVTALCYVLNHYAVAPVGMYERGLMAMMAFPIGILGGYIVLKSKNVWGSV LVHMITMFSMVLDIFVIPNVVPSLFHL
Sequences:
>Translated_187_residues MLYVVGGMGVVVWRGASKGEWVEMYLAGGDLKKSLKWGGIAGGILFVLDLVNTVIYYSKGAPPMVDMLGILVNMNFLFLF PILVLAEEFLWRGLMLSSMVEKGFNPHLSVFVTALCYVLNHYAVAPVGMYERGLMAMMAFPIGILGGYIVLKSKNVWGSV LVHMITMFSMVLDIFVIPNVVPSLFHL >Mature_187_residues MLYVVGGMGVVVWRGASKGEWVEMYLAGGDLKKSLKWGGIAGGILFVLDLVNTVIYYSKGAPPMVDMLGILVNMNFLFLF PILVLAEEFLWRGLMLSSMVEKGFNPHLSVFVTALCYVLNHYAVAPVGMYERGLMAMMAFPIGILGGYIVLKSKNVWGSV LVHMITMFSMVLDIFVIPNVVPSLFHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20645; Mature: 20645
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 8.0 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 8.0 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYVVGGMGVVVWRGASKGEWVEMYLAGGDLKKSLKWGGIAGGILFVLDLVNTVIYYSKG CEEEEECCEEEEECCCCCCCEEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC APPMVDMLGILVNMNFLFLFPILVLAEEFLWRGLMLSSMVEKGFNPHLSVFVTALCYVLN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH HYAVAPVGMYERGLMAMMAFPIGILGGYIVLKSKNVWGSVLVHMITMFSMVLDIFVIPNV HHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH VPSLFHL HHHHHCC >Mature Secondary Structure MLYVVGGMGVVVWRGASKGEWVEMYLAGGDLKKSLKWGGIAGGILFVLDLVNTVIYYSKG CEEEEECCEEEEECCCCCCCEEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC APPMVDMLGILVNMNFLFLFPILVLAEEFLWRGLMLSSMVEKGFNPHLSVFVTALCYVLN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH HYAVAPVGMYERGLMAMMAFPIGILGGYIVLKSKNVWGSVLVHMITMFSMVLDIFVIPNV HHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH VPSLFHL HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA