| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is 21673315
Identifier: 21673315
GI number: 21673315
Start: 494759
End: 496762
Strand: Direct
Name: 21673315
Synonym: CT0480
Alternate gene names: NA
Gene position: 494759-496762 (Clockwise)
Preceding gene: 21673314
Following gene: 21673316
Centisome position: 22.96
GC content: 57.44
Gene sequence:
>2004_bases ATGAAACCGACATACACTACCTGGCTGCGCCGCATGACGGCGTCGGCTATGCTTTTGGCATCTGTGGCCTCACCGGTTCC GGCGCTGGCTTTCGACTCTTTCGAAGAGCTTCTCGACCGTTCCGATTCGATGGGAAATGCCGATGAGCTGTTCAGCGACC TCGAAGAGTTGCGCCGGAACAAAATCCCGGTCAATCGCGCCACCGAAGAGCAACTGCTCAAACTGCCGCTGCTGAGTGCC GCCGATGCTGCGAAAATCATCGAGTGGCGGGAGCAGCGCGGACCAATCGGTTCCGTCGCCGAACTCGAAGCGGTGATCGG CAAGGACACTGCCCGCCGTTTCGCCGCATACCTTTCATTCGAATTGCCCCCTGAGGTGAAGAAAAAAGCGCTGCCCGAAA GAGTCAAGGGCAGCGTGATCGGGCGGGTGTTCTGGGAGGATCCGCCACGTGCAGGGGTCACAAACGGCAAGTATGCCGGA GGCAACCGGCATGTCTACAGCCGCTTCCAGGCAGCTACGCCGCACTACGGCGTGCATCTCCTGTCAGACAGCGATGTCGG CGAGCCGGATATCGATGATTTTCTCTCGTTCAACGTTCATGCTGAAGGCATCGGCATGCTGACGCAGGCGGTTATCGGAA ATTACCGGCTGAGTTTCGGGCAGGGGTTGGTTTTCGGCCAGGGGCGCTACTTTTTTAAAGGCTCGGACGCCGTCGATGGC GTACTGCTCTTCGCGCCGGCGCTTCGTCCCTACATCTCGGCGGGCGAGGACAACTTCTTGCAAGGCGTGGCCGCGACGCT TGCGCCGGGGCCGTTCGAGTTGACGGCGTTCACTTCAAGCAACAAGGTCGATGCGACCATCAAGAACGATGTGGTCACGA GTATTGCAACCACTGGCTATCATCGCACGGCCACAGAGCTTAACAAAAAGGACAACCTCACTCAGGAGGTCAAGGGCGTG AATCTCCGGTACCGCTATCGCGCCGGAGAGTTGAGCACCGCCATTGGCGCGACGTGGGCGAAATACAGATACGGACTTCC GCTCTCATGGCTCGATGACGGCAAAAATGGCGGCCAGCTCGGATCGGTCGAAGCGAGCGCCGTGTATCGAAACACACAGG TTTTCGGCGAGGCTGCATACGCAACCGAGCCCGGCGCCCTGTCATGGATATGCGGCGTTCAGTCCGATCTGGCAAAGGGA ATTACCGGTGTTGTCTCGATGCGTGACTATGCTTTCGAATACTACTCTCCGTTTGCCGGAGCATTCGCCGAGCGGGGCGA CAACGCATCGAACGAGTCGGGCCTTTATCTGGGCCTGAAGGCAAAAGTGCGTGATAACCTGACCCTTGCCGGTTTGTACG ACAGGTTCAGATTTCCGGTGCTCGACAAGCGATATTACGTCTACCCGTCATCCGGCTACGAGGCGCGGTTCTACGCGACC TGGAAGCAGAACCGCTGGATGACCTGGGACGCTATGTATCAGCACAAGGAGAAGGAGGAGGCCAAAAAGCAGTTCGATAG CAACATCGGAACATCGCGTTACATACCGGTGCCCAAAATTACCAACCGGGTGCAGCTCGGTCTGGTAGTCGAATGCTCTC CAGGCATCACGCTGAAATCGCGAGCCGCATTCAAGAGTCTCCGGAGCCACTTTGTCACCGGAGCCGAGAGCGAAGAGGGG TGGCTGTTGTACCAGCAAATCAATCTGAAGCGAGGCCCCTTTACCCTCAAGACCCGCCTTGCCCGTTTCGATACCGACAG TTACGATGTTGCCCTCTACGCCTACGAAGACGACTTGCCGCTGGTTTATATGCTCAACGCTTACTATGGCCGGGGCAAAG CGTGGTTTATTGTGCTCGATTTCGAGCCGGTGAAAAACTTCAATCTGACCGCCAAATACGAAACGACATGGTACGACGAC CGCGACGTTTACAGCAGCGGCAACGACCTGCGCAATACCTCGTCACCGGGTTCGTACCACGTGGGGTGTATGCTGAAGTT TTGA
Upstream 100 bases:
>100_bases CTATCGTTTGTGTGGCGGTCACTGATTATATTTAACAAGTCCCGTTCGACGTAACGGGCTTATCGCTTTTTTTCTCTCCA ATTTTCATCGACCCCTTGCG
Downstream 100 bases:
>100_bases GAGGCGGAGATTGACAGAATTGTTGGGTCGAGGGGGTTGGATGGAAGGATTCTGCCGGGCTATTGTCATTCTGAAGCGAT GGCGGAATGCTTACATTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 667; Mature: 667
Protein sequence:
>667_residues MKPTYTTWLRRMTASAMLLASVASPVPALAFDSFEELLDRSDSMGNADELFSDLEELRRNKIPVNRATEEQLLKLPLLSA ADAAKIIEWREQRGPIGSVAELEAVIGKDTARRFAAYLSFELPPEVKKKALPERVKGSVIGRVFWEDPPRAGVTNGKYAG GNRHVYSRFQAATPHYGVHLLSDSDVGEPDIDDFLSFNVHAEGIGMLTQAVIGNYRLSFGQGLVFGQGRYFFKGSDAVDG VLLFAPALRPYISAGEDNFLQGVAATLAPGPFELTAFTSSNKVDATIKNDVVTSIATTGYHRTATELNKKDNLTQEVKGV NLRYRYRAGELSTAIGATWAKYRYGLPLSWLDDGKNGGQLGSVEASAVYRNTQVFGEAAYATEPGALSWICGVQSDLAKG ITGVVSMRDYAFEYYSPFAGAFAERGDNASNESGLYLGLKAKVRDNLTLAGLYDRFRFPVLDKRYYVYPSSGYEARFYAT WKQNRWMTWDAMYQHKEKEEAKKQFDSNIGTSRYIPVPKITNRVQLGLVVECSPGITLKSRAAFKSLRSHFVTGAESEEG WLLYQQINLKRGPFTLKTRLARFDTDSYDVALYAYEDDLPLVYMLNAYYGRGKAWFIVLDFEPVKNFNLTAKYETTWYDD RDVYSSGNDLRNTSSPGSYHVGCMLKF
Sequences:
>Translated_667_residues MKPTYTTWLRRMTASAMLLASVASPVPALAFDSFEELLDRSDSMGNADELFSDLEELRRNKIPVNRATEEQLLKLPLLSA ADAAKIIEWREQRGPIGSVAELEAVIGKDTARRFAAYLSFELPPEVKKKALPERVKGSVIGRVFWEDPPRAGVTNGKYAG GNRHVYSRFQAATPHYGVHLLSDSDVGEPDIDDFLSFNVHAEGIGMLTQAVIGNYRLSFGQGLVFGQGRYFFKGSDAVDG VLLFAPALRPYISAGEDNFLQGVAATLAPGPFELTAFTSSNKVDATIKNDVVTSIATTGYHRTATELNKKDNLTQEVKGV NLRYRYRAGELSTAIGATWAKYRYGLPLSWLDDGKNGGQLGSVEASAVYRNTQVFGEAAYATEPGALSWICGVQSDLAKG ITGVVSMRDYAFEYYSPFAGAFAERGDNASNESGLYLGLKAKVRDNLTLAGLYDRFRFPVLDKRYYVYPSSGYEARFYAT WKQNRWMTWDAMYQHKEKEEAKKQFDSNIGTSRYIPVPKITNRVQLGLVVECSPGITLKSRAAFKSLRSHFVTGAESEEG WLLYQQINLKRGPFTLKTRLARFDTDSYDVALYAYEDDLPLVYMLNAYYGRGKAWFIVLDFEPVKNFNLTAKYETTWYDD RDVYSSGNDLRNTSSPGSYHVGCMLKF >Mature_667_residues MKPTYTTWLRRMTASAMLLASVASPVPALAFDSFEELLDRSDSMGNADELFSDLEELRRNKIPVNRATEEQLLKLPLLSA ADAAKIIEWREQRGPIGSVAELEAVIGKDTARRFAAYLSFELPPEVKKKALPERVKGSVIGRVFWEDPPRAGVTNGKYAG GNRHVYSRFQAATPHYGVHLLSDSDVGEPDIDDFLSFNVHAEGIGMLTQAVIGNYRLSFGQGLVFGQGRYFFKGSDAVDG VLLFAPALRPYISAGEDNFLQGVAATLAPGPFELTAFTSSNKVDATIKNDVVTSIATTGYHRTATELNKKDNLTQEVKGV NLRYRYRAGELSTAIGATWAKYRYGLPLSWLDDGKNGGQLGSVEASAVYRNTQVFGEAAYATEPGALSWICGVQSDLAKG ITGVVSMRDYAFEYYSPFAGAFAERGDNASNESGLYLGLKAKVRDNLTLAGLYDRFRFPVLDKRYYVYPSSGYEARFYAT WKQNRWMTWDAMYQHKEKEEAKKQFDSNIGTSRYIPVPKITNRVQLGLVVECSPGITLKSRAAFKSLRSHFVTGAESEEG WLLYQQINLKRGPFTLKTRLARFDTDSYDVALYAYEDDLPLVYMLNAYYGRGKAWFIVLDFEPVKNFNLTAKYETTWYDD RDVYSSGNDLRNTSSPGSYHVGCMLKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74460; Mature: 74460
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPTYTTWLRRMTASAMLLASVASPVPALAFDSFEELLDRSDSMGNADELFSDLEELRRN CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC KIPVNRATEEQLLKLPLLSAADAAKIIEWREQRGPIGSVAELEAVIGKDTARRFAAYLSF CCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHCC ELPPEVKKKALPERVKGSVIGRVFWEDPPRAGVTNGKYAGGNRHVYSRFQAATPHYGVHL CCCHHHHHHHCHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEE LSDSDVGEPDIDDFLSFNVHAEGIGMLTQAVIGNYRLSFGQGLVFGQGRYFFKGSDAVDG ECCCCCCCCCHHHHHEEEEECCCHHHHHHHHHCCEEEECCCEEEEECCEEEECCCCCCCC VLLFAPALRPYISAGEDNFLQGVAATLAPGPFELTAFTSSNKVDATIKNDVVTSIATTGY CEEEHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEECCCCEEEEEHHHHHHHHHHCCC HRTATELNKKDNLTQEVKGVNLRYRYRAGELSTAIGATWAKYRYGLPLSWLDDGKNGGQL CHHHHHCCCCCCCHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC GSVEASAVYRNTQVFGEAAYATEPGALSWICGVQSDLAKGITGVVSMRDYAFEYYSPFAG CCEEHHHHEECHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHH AFAERGDNASNESGLYLGLKAKVRDNLTLAGLYDRFRFPVLDKRYYVYPSSGYEARFYAT HHHHCCCCCCCCCCEEEEEEEEECCCEEEEEHHHHHCCCEECCEEEEECCCCCCEEEEEE WKQNRWMTWDAMYQHKEKEEAKKQFDSNIGTSRYIPVPKITNRVQLGLVVECSPGITLKS ECCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEEEECCCCCEEHH RAAFKSLRSHFVTGAESEEGWLLYQQINLKRGPFTLKTRLARFDTDSYDVALYAYEDDLP HHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCC LVYMLNAYYGRGKAWFIVLDFEPVKNFNLTAKYETTWYDDRDVYSSGNDLRNTSSPGSYH EEEEEECEECCCEEEEEEEECCCCCCCEEEEEEEECCCCCCHHHCCCCCCCCCCCCCCEE VGCMLKF EEEEEEC >Mature Secondary Structure MKPTYTTWLRRMTASAMLLASVASPVPALAFDSFEELLDRSDSMGNADELFSDLEELRRN CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC KIPVNRATEEQLLKLPLLSAADAAKIIEWREQRGPIGSVAELEAVIGKDTARRFAAYLSF CCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHCC ELPPEVKKKALPERVKGSVIGRVFWEDPPRAGVTNGKYAGGNRHVYSRFQAATPHYGVHL CCCHHHHHHHCHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEE LSDSDVGEPDIDDFLSFNVHAEGIGMLTQAVIGNYRLSFGQGLVFGQGRYFFKGSDAVDG ECCCCCCCCCHHHHHEEEEECCCHHHHHHHHHCCEEEECCCEEEEECCEEEECCCCCCCC VLLFAPALRPYISAGEDNFLQGVAATLAPGPFELTAFTSSNKVDATIKNDVVTSIATTGY CEEEHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEECCCCEEEEEHHHHHHHHHHCCC HRTATELNKKDNLTQEVKGVNLRYRYRAGELSTAIGATWAKYRYGLPLSWLDDGKNGGQL CHHHHHCCCCCCCHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC GSVEASAVYRNTQVFGEAAYATEPGALSWICGVQSDLAKGITGVVSMRDYAFEYYSPFAG CCEEHHHHEECHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHH AFAERGDNASNESGLYLGLKAKVRDNLTLAGLYDRFRFPVLDKRYYVYPSSGYEARFYAT HHHHCCCCCCCCCCEEEEEEEEECCCEEEEEHHHHHCCCEECCEEEEECCCCCCEEEEEE WKQNRWMTWDAMYQHKEKEEAKKQFDSNIGTSRYIPVPKITNRVQLGLVVECSPGITLKS ECCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEEEECCCCCEEHH RAAFKSLRSHFVTGAESEEGWLLYQQINLKRGPFTLKTRLARFDTDSYDVALYAYEDDLP HHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCC LVYMLNAYYGRGKAWFIVLDFEPVKNFNLTAKYETTWYDDRDVYSSGNDLRNTSSPGSYH EEEEEECEECCCEEEEEEEECCCCCCCEEEEEEEECCCCCCHHHCCCCCCCCCCCCCCEE VGCMLKF EEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA