Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21673255

Identifier: 21673255

GI number: 21673255

Start: 430381

End: 431394

Strand: Direct

Name: 21673255

Synonym: CT0416

Alternate gene names: NA

Gene position: 430381-431394 (Clockwise)

Preceding gene: 21673254

Following gene: 21673256

Centisome position: 19.97

GC content: 58.38

Gene sequence:

>1014_bases
GTGAACTGGCTGCTCAACATCAGTACCCACGGTTCTGATCTGGAGATTGCCGGGCCGGAGTGGAGCGAAGCGGTCTCGCT
GCTCCGGCGCACCGGCATGGACGGCTTCGAGCTGTACCCGGCTGGCGCGTACGACTGCACGGCGATTCCGAAAGAGATTG
TCGGCGGAGTGCACCTGCGCTTTTTCGTCATGCTCCGCCAGATATGGCAGAACGACCGGGAGGGGTTGCTCCGCATGTTC
GGCAGCGAACAGACCGTGCGCCACTACTACAGCGGCGTGAATCGCGAAGCCGTGATCTCGTGCTACCGTTCACAGCTCGA
ACTGGCGGCCCGTTTCAATGTTCCCTATGTCGTCTTCCATCCCGTTCACTACGAGCTGGAGTATGTTTTCAACTGGCAGC
CACCCTGGGGCTGGCGGGAGACTGTCGATCTCTCGACGGAGATTATCAACGAGGTGGTGCGCGACACTCCGTACGATGGC
TGGATTCTGTTCGAGAACCTCTGGTGGCCGGGCAACTTCCGGCTCGACAGCACGGATGAGATCGACCGCCTGCTCTCGAA
AGTCCGGTGGCCGAAGTGCGGCATCGTGCTCGATACCGCCCATATTCTGAACAAGAATCAGGAGTTGCGAACTGAAGAAG
AGGCGATTGCTTTTCTCTTGCGGCAAGTCGAGCGGCTCGGCGACTACCGCCAGCTCATCAAGGCGGTGCATCTCAGCAAG
AGTCTGTCGGGCGAAGCGGCCAAGGCCGGATTTGCCAACGCCGATCCCTTTTGCGGCGCTCACGATTTCTGGCAGCGCTT
CTCCATCGCTCTCCGCCATGTACGCGATCTGGATCGTCACGAGCCTTTTTCGCACTCCATGCTTGGCGAGCTGTTCGATC
TCATCGAGCCGGACAACGTCGTGTTCGAACTTGCCTTCAGCTCCCTTGACGAGTGGATTGGCAAGATCGAACAACAGCAG
CGGGCGTTACAACGCTTTTTTCCTGAATGCCGAATCAAGGAGAATTTGTATTGA

Upstream 100 bases:

>100_bases
TTTACGACCGGATCGACGTTGAGCTTTTGCTTGCGCGAAACGGGCGCTCGCCAGATGCCTGCCGGGCCGATGAAACCGGA
AAGCGCGAGGAGGAAACGCC

Downstream 100 bases:

>100_bases
ACAATCACCGGATTTCATCGCTCATGCTCGTCGTCACCACAGCATGTAATCTCGATTGCGCCTATTGCTACGAAGGCGGC
GGCAACGGTCAGGGAGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; Xylose Isomerase Domain-Containing Protein TIM Barrel

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MNWLLNISTHGSDLEIAGPEWSEAVSLLRRTGMDGFELYPAGAYDCTAIPKEIVGGVHLRFFVMLRQIWQNDREGLLRMF
GSEQTVRHYYSGVNREAVISCYRSQLELAARFNVPYVVFHPVHYELEYVFNWQPPWGWRETVDLSTEIINEVVRDTPYDG
WILFENLWWPGNFRLDSTDEIDRLLSKVRWPKCGIVLDTAHILNKNQELRTEEEAIAFLLRQVERLGDYRQLIKAVHLSK
SLSGEAAKAGFANADPFCGAHDFWQRFSIALRHVRDLDRHEPFSHSMLGELFDLIEPDNVVFELAFSSLDEWIGKIEQQQ
RALQRFFPECRIKENLY

Sequences:

>Translated_337_residues
MNWLLNISTHGSDLEIAGPEWSEAVSLLRRTGMDGFELYPAGAYDCTAIPKEIVGGVHLRFFVMLRQIWQNDREGLLRMF
GSEQTVRHYYSGVNREAVISCYRSQLELAARFNVPYVVFHPVHYELEYVFNWQPPWGWRETVDLSTEIINEVVRDTPYDG
WILFENLWWPGNFRLDSTDEIDRLLSKVRWPKCGIVLDTAHILNKNQELRTEEEAIAFLLRQVERLGDYRQLIKAVHLSK
SLSGEAAKAGFANADPFCGAHDFWQRFSIALRHVRDLDRHEPFSHSMLGELFDLIEPDNVVFELAFSSLDEWIGKIEQQQ
RALQRFFPECRIKENLY
>Mature_337_residues
MNWLLNISTHGSDLEIAGPEWSEAVSLLRRTGMDGFELYPAGAYDCTAIPKEIVGGVHLRFFVMLRQIWQNDREGLLRMF
GSEQTVRHYYSGVNREAVISCYRSQLELAARFNVPYVVFHPVHYELEYVFNWQPPWGWRETVDLSTEIINEVVRDTPYDG
WILFENLWWPGNFRLDSTDEIDRLLSKVRWPKCGIVLDTAHILNKNQELRTEEEAIAFLLRQVERLGDYRQLIKAVHLSK
SLSGEAAKAGFANADPFCGAHDFWQRFSIALRHVRDLDRHEPFSHSMLGELFDLIEPDNVVFELAFSSLDEWIGKIEQQQ
RALQRFFPECRIKENLY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39386; Mature: 39386

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWLLNISTHGSDLEIAGPEWSEAVSLLRRTGMDGFELYPAGAYDCTAIPKEIVGGVHLR
CCEEEEECCCCCCEEECCCCHHHHHHHHHHCCCCCCEECCCCCCCHHCCCHHHHCHHHHH
FFVMLRQIWQNDREGLLRMFGSEQTVRHYYSGVNREAVISCYRSQLELAARFNVPYVVFH
HHHHHHHHHHCHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE
PVHYELEYVFNWQPPWGWRETVDLSTEIINEVVRDTPYDGWILFENLWWPGNFRLDSTDE
CCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHH
IDRLLSKVRWPKCGIVLDTAHILNKNQELRTEEEAIAFLLRQVERLGDYRQLIKAVHLSK
HHHHHHHHCCCCCCEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLSGEAAKAGFANADPFCGAHDFWQRFSIALRHVRDLDRHEPFSHSMLGELFDLIEPDNV
HCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHH
VFELAFSSLDEWIGKIEQQQRALQRFFPECRIKENLY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCC
>Mature Secondary Structure
MNWLLNISTHGSDLEIAGPEWSEAVSLLRRTGMDGFELYPAGAYDCTAIPKEIVGGVHLR
CCEEEEECCCCCCEEECCCCHHHHHHHHHHCCCCCCEECCCCCCCHHCCCHHHHCHHHHH
FFVMLRQIWQNDREGLLRMFGSEQTVRHYYSGVNREAVISCYRSQLELAARFNVPYVVFH
HHHHHHHHHHCHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE
PVHYELEYVFNWQPPWGWRETVDLSTEIINEVVRDTPYDGWILFENLWWPGNFRLDSTDE
CCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHH
IDRLLSKVRWPKCGIVLDTAHILNKNQELRTEEEAIAFLLRQVERLGDYRQLIKAVHLSK
HHHHHHHHCCCCCCEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLSGEAAKAGFANADPFCGAHDFWQRFSIALRHVRDLDRHEPFSHSMLGELFDLIEPDNV
HCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHH
VFELAFSSLDEWIGKIEQQQRALQRFFPECRIKENLY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA