Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21673249

Identifier: 21673249

GI number: 21673249

Start: 423095

End: 424306

Strand: Direct

Name: 21673249

Synonym: CT0410

Alternate gene names: NA

Gene position: 423095-424306 (Clockwise)

Preceding gene: 21673248

Following gene: 21673250

Centisome position: 19.63

GC content: 59.74

Gene sequence:

>1212_bases
GTGATGGCTCGATTCTACATAAGCATCAGACGTTTTGGCGCACTGCCGGTTCTTGGCGTCATTTTGTTGCAGGCGGCATT
GCTCGCGGGATGCGGTACGCCTTCTGGCGGAAAACAGCATTCGACGAGCGTGGCGTCCGCTCCGGATTCTCTCAAGAGCT
CTATCGGGTATTCGCGGCGCTTCAGGCTTTTTCGCCGGGGTGAGGTTACGGTGCTGGAGGTCATGGCCGGTCAAAAAGCT
TACCCTGATACGCTTCGGTACCTTCTGGTTCCGGAGGGCAGGCCTCAACCTTCGGGTTTTGTTGGTTACACAGTCATTCG
CACGCCGGTCAAGCGGATTGCCGTATTTTCCACCACGCATATCGGTTTTCTCGATATGCTCGGCAGGAGTGACGGCATTA
TCGGGGTTTCCCGTCCCGAGTTTGTCAACACCCCTGCGGTCAGATCCCGCATAAGGAGCGGAGCGATCAAAGCGATCGGC
ATGCCGTTCAGTCCCGATGTCGAGGCTCTGCTGAATCTGGAGCCCGATCTGGTTATCGCGCCGGCGCTTCCCGCGGCCCG
GAAGACCGATTATCAGGCGCTTGTCCAGGCGGGCATTCCGGTGCTCGTCGTTGCCGAATGGCTGGAGCCGTCGCCTCTCG
GGCGCGCCGAGTGGATCAAGCTTTTCGGCGCGCTTGTCGGCAAGGAGAAACTTGCCCGCGAGCGGTTTGCTGCGATTGAA
TCTTCGTACCTGAAGATCGCCGCGCTTTCCCGTAACCTGCCGAACCGCCCAACCGTGCTGACCGGCCTGCCGGTGAAGGA
TGCCTGGTATGTCCCGACGGGCGGAAGCTACGTGGCGGCCATGCTTCGTGATGCAGGGGCCTCGTACCACTGGCGTGATC
TGCCCGGAACCGGAAGCGTGCCGCTTACGATTGAGGCGGTCTGGCCGGTTGCGCTCGAAGCTGAGTACTGGCTGAATACC
GGAACGGTCTCCACTCTCGATGAGTTGCTGGCCGTCGATTCCCGTTTCGGGCAGATGCGGTCGGTCAGGGAGCGGCGAGT
CTGGAACAACAACCGGCTGGTCAACGCAGCGGGCGGCAATGCTTACTGGGAGAGTGGCGTGGTCAGGCCTGACCTGATTC
TAAAGGATCTGGTGATGATTCTTCATCCGGGTCTTCTTCGCGCTCACGGTATCGGTGAGGGTGAACTCACCTTTTTCCAG
GAGGTGAAGTAA

Upstream 100 bases:

>100_bases
CGTGCTCTGTTCGGCTTGTGAGCAGGAGTGTGCAGCGGGCGCGATCTCGTTTCCCTCGCCTGAGGAGTTCGAGCAGTTTG
TTGAATATCTCGACTGAACG

Downstream 100 bases:

>100_bases
CATGAGTAACGTTGCGGAACTTCGTGCCCCGGCCCATCCCTGGCCTTCGCTCGTGCCGAAAAGCGGCATGATCCTCTTTA
TGCTGATCCTGCTTGTGCTG

Product: iron(III) ABC transporter, periplasmic iron-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MMARFYISIRRFGALPVLGVILLQAALLAGCGTPSGGKQHSTSVASAPDSLKSSIGYSRRFRLFRRGEVTVLEVMAGQKA
YPDTLRYLLVPEGRPQPSGFVGYTVIRTPVKRIAVFSTTHIGFLDMLGRSDGIIGVSRPEFVNTPAVRSRIRSGAIKAIG
MPFSPDVEALLNLEPDLVIAPALPAARKTDYQALVQAGIPVLVVAEWLEPSPLGRAEWIKLFGALVGKEKLARERFAAIE
SSYLKIAALSRNLPNRPTVLTGLPVKDAWYVPTGGSYVAAMLRDAGASYHWRDLPGTGSVPLTIEAVWPVALEAEYWLNT
GTVSTLDELLAVDSRFGQMRSVRERRVWNNNRLVNAAGGNAYWESGVVRPDLILKDLVMILHPGLLRAHGIGEGELTFFQ
EVK

Sequences:

>Translated_403_residues
MMARFYISIRRFGALPVLGVILLQAALLAGCGTPSGGKQHSTSVASAPDSLKSSIGYSRRFRLFRRGEVTVLEVMAGQKA
YPDTLRYLLVPEGRPQPSGFVGYTVIRTPVKRIAVFSTTHIGFLDMLGRSDGIIGVSRPEFVNTPAVRSRIRSGAIKAIG
MPFSPDVEALLNLEPDLVIAPALPAARKTDYQALVQAGIPVLVVAEWLEPSPLGRAEWIKLFGALVGKEKLARERFAAIE
SSYLKIAALSRNLPNRPTVLTGLPVKDAWYVPTGGSYVAAMLRDAGASYHWRDLPGTGSVPLTIEAVWPVALEAEYWLNT
GTVSTLDELLAVDSRFGQMRSVRERRVWNNNRLVNAAGGNAYWESGVVRPDLILKDLVMILHPGLLRAHGIGEGELTFFQ
EVK
>Mature_403_residues
MMARFYISIRRFGALPVLGVILLQAALLAGCGTPSGGKQHSTSVASAPDSLKSSIGYSRRFRLFRRGEVTVLEVMAGQKA
YPDTLRYLLVPEGRPQPSGFVGYTVIRTPVKRIAVFSTTHIGFLDMLGRSDGIIGVSRPEFVNTPAVRSRIRSGAIKAIG
MPFSPDVEALLNLEPDLVIAPALPAARKTDYQALVQAGIPVLVVAEWLEPSPLGRAEWIKLFGALVGKEKLARERFAAIE
SSYLKIAALSRNLPNRPTVLTGLPVKDAWYVPTGGSYVAAMLRDAGASYHWRDLPGTGSVPLTIEAVWPVALEAEYWLNT
GTVSTLDELLAVDSRFGQMRSVRERRVWNNNRLVNAAGGNAYWESGVVRPDLILKDLVMILHPGLLRAHGIGEGELTFFQ
EVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 43957; Mature: 43957

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMARFYISIRRFGALPVLGVILLQAALLAGCGTPSGGKQHSTSVASAPDSLKSSIGYSRR
CCEEEEEHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHCCHHHH
FRLFRRGEVTVLEVMAGQKAYPDTLRYLLVPEGRPQPSGFVGYTVIRTPVKRIAVFSTTH
HHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHCCH
IGFLDMLGRSDGIIGVSRPEFVNTPAVRSRIRSGAIKAIGMPFSPDVEALLNLEPDLVIA
HHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHCCEEEECCCCCCCHHHHHCCCCCEEEE
PALPAARKTDYQALVQAGIPVLVVAEWLEPSPLGRAEWIKLFGALVGKEKLARERFAAIE
CCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SSYLKIAALSRNLPNRPTVLTGLPVKDAWYVPTGGSYVAAMLRDAGASYHWRDLPGTGSV
HHHHEEEEHHCCCCCCCEEEECCCCCCCEECCCCCHHHHHHHHHCCCCCEECCCCCCCCC
PLTIEAVWPVALEAEYWLNTGTVSTLDELLAVDSRFGQMRSVRERRVWNNNRLVNAAGGN
CEEEEEECCEEEEHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
AYWESGVVRPDLILKDLVMILHPGLLRAHGIGEGELTFFQEVK
CHHHCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCEEHEECCC
>Mature Secondary Structure
MMARFYISIRRFGALPVLGVILLQAALLAGCGTPSGGKQHSTSVASAPDSLKSSIGYSRR
CCEEEEEHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHCCHHHH
FRLFRRGEVTVLEVMAGQKAYPDTLRYLLVPEGRPQPSGFVGYTVIRTPVKRIAVFSTTH
HHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHCCH
IGFLDMLGRSDGIIGVSRPEFVNTPAVRSRIRSGAIKAIGMPFSPDVEALLNLEPDLVIA
HHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHCCEEEECCCCCCCHHHHHCCCCCEEEE
PALPAARKTDYQALVQAGIPVLVVAEWLEPSPLGRAEWIKLFGALVGKEKLARERFAAIE
CCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SSYLKIAALSRNLPNRPTVLTGLPVKDAWYVPTGGSYVAAMLRDAGASYHWRDLPGTGSV
HHHHEEEEHHCCCCCCCEEEECCCCCCCEECCCCCHHHHHHHHHCCCCCEECCCCCCCCC
PLTIEAVWPVALEAEYWLNTGTVSTLDELLAVDSRFGQMRSVRERRVWNNNRLVNAAGGN
CEEEEEECCEEEEHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
AYWESGVVRPDLILKDLVMILHPGLLRAHGIGEGELTFFQEVK
CHHHCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCEEHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]