| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673237
Identifier: 21673237
GI number: 21673237
Start: 411049
End: 412311
Strand: Reverse
Name: 21673237
Synonym: CT0398
Alternate gene names: NA
Gene position: 412311-411049 (Counterclockwise)
Preceding gene: 21673244
Following gene: 21673236
Centisome position: 19.13
GC content: 56.29
Gene sequence:
>1263_bases ATGAACGTCAATAATTTCAGATTAAAGCTCGGCGGAAAAGAGTATATCCCCATCGTCATCGGTGGCATGGGGGTCAATAT CTCGACCTCGGAGCTCGCCTTGTCGGCGGAACGGCTGGGAGGTATTGGTCATATTTCCGATGCCGAGGTGATGTTTGTCT GCGACCAGCTGTTTGGAACCTCATACGTAGCCGACAAGCGCCAGATGTATGCGTCGAACGTCAACAATCGCGACAAATCG TCGGTGCATTTCGATCTGGAACAGCTCGCCGAAGCTCAGAAGCGGTTTGTATCCCATACCATCAGTCAGAAAACAGGCAA TGGAGCGATCTTCATGAATTGCATGGAGAAGCTTACGATGAACAACTCCGCCGCGACACTCAAGGTGCGCATGGAGGCAG CCATGGAAGCGGGAATCGACGGCATCACGCTGGCCGCCGGACTCCATCTGAGAAGCCTCGATCTTATCAGCGAGCACGAA CGGTTCCGTGACGTCAAGCTCGGCATCGTCATCTCGTCGGTGCGAGCCCTCTCGATCTTCCTGAAACGAGCCATGCGTTT GCAGCGGCCGCCAGACTACATTGTGGTCGAAGGTCCGCTGGCCGGTGGCCATCTCGGCTTCGGCCCAGACGACTGGCAGT CGCAAAGCCTGCAATCCATCGTGGCTGAAACGCTCGCCTTTCTCAAAAAGGAAAATCTGGATATTCCGATCATTCCTGCG GGCGGCATCTTCACCGGCACCGATGCGGTCGAGTACCTGCAAGCGGGCGCTGCCGCCGTGCAGGTGGCCACGCGATTCAC CATCGCCAGGGAGTCTGGCCTGCCGGACGAGGTCAAGCAGCATTACATCAACGCCAGCCCGGAGGATGTGGAGGTCAACC TTTCATCGCCTACCGGTTATCCGATGCGAATGCTGAAACAGTCGCCGACCCTGTACTACAGCAGAAAGCCGAACTGCGAA GGACTTGGCTATCTGCTCGATAACAACGGTCAATGCTCCTATATCGACGATTACTACGAGGCGCTCGAATCAAGGAACCC CGCAGAGGGCCGTTTCGTGGTCAAAAACCACACCTGCCTCTGCACCGGCATGGCTCGCTACGACTGCTGGACCTGCGGCC ATACGGTTTCACGGCTGAAGGAGACCGTCAACCGGTTGCCGGACGGCTCCTGGCAGTTACCTTCCGCCGAGGATATTTTC ATGGACTACCTCCTGAGCGAAAACCACTCGATCAGAAAACCGGAGATCAAAAAGCAAGGGTGA
Upstream 100 bases:
>100_bases GAGCCCATGGCAACGGCTACCGTTGCCCGTCGGACGGAGGAACAAGCCAGCGCCCACCGGGCGGCACTTCAGTAACCAGC ACGTATCAGATCTGAACACC
Downstream 100 bases:
>100_bases GCGTCAGTCTTTTTGCCTCAGACAATCAGATAGCTTACCTTGGATGGAAAGGAACAAGTGCGTCTCTCGCGCCTGTTCCG TCACCATGTTCCAACCAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: 2-Nitropropane Dioxygenase; Oxidoreductase 2-Nitropropane Dioxygenase Family; 2-Nitropropane Dioxygenase Family Oxidoreductase; Oxidoreductase; 2-Nitropropane Dioxygenase Npd; Dioxygenase Related 2-Nitropropane Dioxygenase; Oxidoreductase 2-Nitropropane Dioxygenase Family Protein; Enoyl-[Acyl-Carrier Protein] Reductase; Dioxygenases Related 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family; Flavin-Containing Oxidoreductase; 2-Nitropropane Dioxygenase-Like Protein; Dioxygenase; 2-Nitropropane Dioxygenase-Like Dioxygenase
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MNVNNFRLKLGGKEYIPIVIGGMGVNISTSELALSAERLGGIGHISDAEVMFVCDQLFGTSYVADKRQMYASNVNNRDKS SVHFDLEQLAEAQKRFVSHTISQKTGNGAIFMNCMEKLTMNNSAATLKVRMEAAMEAGIDGITLAAGLHLRSLDLISEHE RFRDVKLGIVISSVRALSIFLKRAMRLQRPPDYIVVEGPLAGGHLGFGPDDWQSQSLQSIVAETLAFLKKENLDIPIIPA GGIFTGTDAVEYLQAGAAAVQVATRFTIARESGLPDEVKQHYINASPEDVEVNLSSPTGYPMRMLKQSPTLYYSRKPNCE GLGYLLDNNGQCSYIDDYYEALESRNPAEGRFVVKNHTCLCTGMARYDCWTCGHTVSRLKETVNRLPDGSWQLPSAEDIF MDYLLSENHSIRKPEIKKQG
Sequences:
>Translated_420_residues MNVNNFRLKLGGKEYIPIVIGGMGVNISTSELALSAERLGGIGHISDAEVMFVCDQLFGTSYVADKRQMYASNVNNRDKS SVHFDLEQLAEAQKRFVSHTISQKTGNGAIFMNCMEKLTMNNSAATLKVRMEAAMEAGIDGITLAAGLHLRSLDLISEHE RFRDVKLGIVISSVRALSIFLKRAMRLQRPPDYIVVEGPLAGGHLGFGPDDWQSQSLQSIVAETLAFLKKENLDIPIIPA GGIFTGTDAVEYLQAGAAAVQVATRFTIARESGLPDEVKQHYINASPEDVEVNLSSPTGYPMRMLKQSPTLYYSRKPNCE GLGYLLDNNGQCSYIDDYYEALESRNPAEGRFVVKNHTCLCTGMARYDCWTCGHTVSRLKETVNRLPDGSWQLPSAEDIF MDYLLSENHSIRKPEIKKQG >Mature_420_residues MNVNNFRLKLGGKEYIPIVIGGMGVNISTSELALSAERLGGIGHISDAEVMFVCDQLFGTSYVADKRQMYASNVNNRDKS SVHFDLEQLAEAQKRFVSHTISQKTGNGAIFMNCMEKLTMNNSAATLKVRMEAAMEAGIDGITLAAGLHLRSLDLISEHE RFRDVKLGIVISSVRALSIFLKRAMRLQRPPDYIVVEGPLAGGHLGFGPDDWQSQSLQSIVAETLAFLKKENLDIPIIPA GGIFTGTDAVEYLQAGAAAVQVATRFTIARESGLPDEVKQHYINASPEDVEVNLSSPTGYPMRMLKQSPTLYYSRKPNCE GLGYLLDNNGQCSYIDDYYEALESRNPAEGRFVVKNHTCLCTGMARYDCWTCGHTVSRLKETVNRLPDGSWQLPSAEDIF MDYLLSENHSIRKPEIKKQG
Specific function: Unknown
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46429; Mature: 46429
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVNNFRLKLGGKEYIPIVIGGMGVNISTSELALSAERLGGIGHISDAEVMFVCDQLFGT CCCCEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCHHHEEEHHHHCC SYVADKRQMYASNVNNRDKSSVHFDLEQLAEAQKRFVSHTISQKTGNGAIFMNCMEKLTM HHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHC NNSAATLKVRMEAAMEAGIDGITLAAGLHLRSLDLISEHERFRDVKLGIVISSVRALSIF CCCCEEEEEEEHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHH LKRAMRLQRPPDYIVVEGPLAGGHLGFGPDDWQSQSLQSIVAETLAFLKKENLDIPIIPA HHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECC GGIFTGTDAVEYLQAGAAAVQVATRFTIARESGLPDEVKQHYINASPEDVEVNLSSPTGY CCCCCCHHHHHHHHHCHHHHHHHHHHEEHHCCCCCHHHHHHHCCCCCCCEEEEECCCCCC PMRMLKQSPTLYYSRKPNCEGLGYLLDNNGQCSYIDDYYEALESRNPAEGRFVVKNHTCL HHHHHHCCCCEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEECCEEE CTGMARYDCWTCGHTVSRLKETVNRLPDGSWQLPSAEDIFMDYLLSENHSIRKPEIKKQG EECCHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MNVNNFRLKLGGKEYIPIVIGGMGVNISTSELALSAERLGGIGHISDAEVMFVCDQLFGT CCCCEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCHHHEEEHHHHCC SYVADKRQMYASNVNNRDKSSVHFDLEQLAEAQKRFVSHTISQKTGNGAIFMNCMEKLTM HHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHC NNSAATLKVRMEAAMEAGIDGITLAAGLHLRSLDLISEHERFRDVKLGIVISSVRALSIF CCCCEEEEEEEHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHH LKRAMRLQRPPDYIVVEGPLAGGHLGFGPDDWQSQSLQSIVAETLAFLKKENLDIPIIPA HHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECC GGIFTGTDAVEYLQAGAAAVQVATRFTIARESGLPDEVKQHYINASPEDVEVNLSSPTGY CCCCCCHHHHHHHHHCHHHHHHHHHHEEHHCCCCCHHHHHHHCCCCCCCEEEEECCCCCC PMRMLKQSPTLYYSRKPNCEGLGYLLDNNGQCSYIDDYYEALESRNPAEGRFVVKNHTCL HHHHHHCCCCEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEECCEEE CTGMARYDCWTCGHTVSRLKETVNRLPDGSWQLPSAEDIFMDYLLSENHSIRKPEIKKQG EECCHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA