Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21673237

Identifier: 21673237

GI number: 21673237

Start: 411049

End: 412311

Strand: Reverse

Name: 21673237

Synonym: CT0398

Alternate gene names: NA

Gene position: 412311-411049 (Counterclockwise)

Preceding gene: 21673244

Following gene: 21673236

Centisome position: 19.13

GC content: 56.29

Gene sequence:

>1263_bases
ATGAACGTCAATAATTTCAGATTAAAGCTCGGCGGAAAAGAGTATATCCCCATCGTCATCGGTGGCATGGGGGTCAATAT
CTCGACCTCGGAGCTCGCCTTGTCGGCGGAACGGCTGGGAGGTATTGGTCATATTTCCGATGCCGAGGTGATGTTTGTCT
GCGACCAGCTGTTTGGAACCTCATACGTAGCCGACAAGCGCCAGATGTATGCGTCGAACGTCAACAATCGCGACAAATCG
TCGGTGCATTTCGATCTGGAACAGCTCGCCGAAGCTCAGAAGCGGTTTGTATCCCATACCATCAGTCAGAAAACAGGCAA
TGGAGCGATCTTCATGAATTGCATGGAGAAGCTTACGATGAACAACTCCGCCGCGACACTCAAGGTGCGCATGGAGGCAG
CCATGGAAGCGGGAATCGACGGCATCACGCTGGCCGCCGGACTCCATCTGAGAAGCCTCGATCTTATCAGCGAGCACGAA
CGGTTCCGTGACGTCAAGCTCGGCATCGTCATCTCGTCGGTGCGAGCCCTCTCGATCTTCCTGAAACGAGCCATGCGTTT
GCAGCGGCCGCCAGACTACATTGTGGTCGAAGGTCCGCTGGCCGGTGGCCATCTCGGCTTCGGCCCAGACGACTGGCAGT
CGCAAAGCCTGCAATCCATCGTGGCTGAAACGCTCGCCTTTCTCAAAAAGGAAAATCTGGATATTCCGATCATTCCTGCG
GGCGGCATCTTCACCGGCACCGATGCGGTCGAGTACCTGCAAGCGGGCGCTGCCGCCGTGCAGGTGGCCACGCGATTCAC
CATCGCCAGGGAGTCTGGCCTGCCGGACGAGGTCAAGCAGCATTACATCAACGCCAGCCCGGAGGATGTGGAGGTCAACC
TTTCATCGCCTACCGGTTATCCGATGCGAATGCTGAAACAGTCGCCGACCCTGTACTACAGCAGAAAGCCGAACTGCGAA
GGACTTGGCTATCTGCTCGATAACAACGGTCAATGCTCCTATATCGACGATTACTACGAGGCGCTCGAATCAAGGAACCC
CGCAGAGGGCCGTTTCGTGGTCAAAAACCACACCTGCCTCTGCACCGGCATGGCTCGCTACGACTGCTGGACCTGCGGCC
ATACGGTTTCACGGCTGAAGGAGACCGTCAACCGGTTGCCGGACGGCTCCTGGCAGTTACCTTCCGCCGAGGATATTTTC
ATGGACTACCTCCTGAGCGAAAACCACTCGATCAGAAAACCGGAGATCAAAAAGCAAGGGTGA

Upstream 100 bases:

>100_bases
GAGCCCATGGCAACGGCTACCGTTGCCCGTCGGACGGAGGAACAAGCCAGCGCCCACCGGGCGGCACTTCAGTAACCAGC
ACGTATCAGATCTGAACACC

Downstream 100 bases:

>100_bases
GCGTCAGTCTTTTTGCCTCAGACAATCAGATAGCTTACCTTGGATGGAAAGGAACAAGTGCGTCTCTCGCGCCTGTTCCG
TCACCATGTTCCAACCAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: 2-Nitropropane Dioxygenase; Oxidoreductase 2-Nitropropane Dioxygenase Family; 2-Nitropropane Dioxygenase Family Oxidoreductase; Oxidoreductase; 2-Nitropropane Dioxygenase Npd; Dioxygenase Related 2-Nitropropane Dioxygenase; Oxidoreductase 2-Nitropropane Dioxygenase Family Protein; Enoyl-[Acyl-Carrier Protein] Reductase; Dioxygenases Related 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family; Flavin-Containing Oxidoreductase; 2-Nitropropane Dioxygenase-Like Protein; Dioxygenase; 2-Nitropropane Dioxygenase-Like Dioxygenase

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MNVNNFRLKLGGKEYIPIVIGGMGVNISTSELALSAERLGGIGHISDAEVMFVCDQLFGTSYVADKRQMYASNVNNRDKS
SVHFDLEQLAEAQKRFVSHTISQKTGNGAIFMNCMEKLTMNNSAATLKVRMEAAMEAGIDGITLAAGLHLRSLDLISEHE
RFRDVKLGIVISSVRALSIFLKRAMRLQRPPDYIVVEGPLAGGHLGFGPDDWQSQSLQSIVAETLAFLKKENLDIPIIPA
GGIFTGTDAVEYLQAGAAAVQVATRFTIARESGLPDEVKQHYINASPEDVEVNLSSPTGYPMRMLKQSPTLYYSRKPNCE
GLGYLLDNNGQCSYIDDYYEALESRNPAEGRFVVKNHTCLCTGMARYDCWTCGHTVSRLKETVNRLPDGSWQLPSAEDIF
MDYLLSENHSIRKPEIKKQG

Sequences:

>Translated_420_residues
MNVNNFRLKLGGKEYIPIVIGGMGVNISTSELALSAERLGGIGHISDAEVMFVCDQLFGTSYVADKRQMYASNVNNRDKS
SVHFDLEQLAEAQKRFVSHTISQKTGNGAIFMNCMEKLTMNNSAATLKVRMEAAMEAGIDGITLAAGLHLRSLDLISEHE
RFRDVKLGIVISSVRALSIFLKRAMRLQRPPDYIVVEGPLAGGHLGFGPDDWQSQSLQSIVAETLAFLKKENLDIPIIPA
GGIFTGTDAVEYLQAGAAAVQVATRFTIARESGLPDEVKQHYINASPEDVEVNLSSPTGYPMRMLKQSPTLYYSRKPNCE
GLGYLLDNNGQCSYIDDYYEALESRNPAEGRFVVKNHTCLCTGMARYDCWTCGHTVSRLKETVNRLPDGSWQLPSAEDIF
MDYLLSENHSIRKPEIKKQG
>Mature_420_residues
MNVNNFRLKLGGKEYIPIVIGGMGVNISTSELALSAERLGGIGHISDAEVMFVCDQLFGTSYVADKRQMYASNVNNRDKS
SVHFDLEQLAEAQKRFVSHTISQKTGNGAIFMNCMEKLTMNNSAATLKVRMEAAMEAGIDGITLAAGLHLRSLDLISEHE
RFRDVKLGIVISSVRALSIFLKRAMRLQRPPDYIVVEGPLAGGHLGFGPDDWQSQSLQSIVAETLAFLKKENLDIPIIPA
GGIFTGTDAVEYLQAGAAAVQVATRFTIARESGLPDEVKQHYINASPEDVEVNLSSPTGYPMRMLKQSPTLYYSRKPNCE
GLGYLLDNNGQCSYIDDYYEALESRNPAEGRFVVKNHTCLCTGMARYDCWTCGHTVSRLKETVNRLPDGSWQLPSAEDIF
MDYLLSENHSIRKPEIKKQG

Specific function: Unknown

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46429; Mature: 46429

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVNNFRLKLGGKEYIPIVIGGMGVNISTSELALSAERLGGIGHISDAEVMFVCDQLFGT
CCCCEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCHHHEEEHHHHCC
SYVADKRQMYASNVNNRDKSSVHFDLEQLAEAQKRFVSHTISQKTGNGAIFMNCMEKLTM
HHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHC
NNSAATLKVRMEAAMEAGIDGITLAAGLHLRSLDLISEHERFRDVKLGIVISSVRALSIF
CCCCEEEEEEEHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHH
LKRAMRLQRPPDYIVVEGPLAGGHLGFGPDDWQSQSLQSIVAETLAFLKKENLDIPIIPA
HHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECC
GGIFTGTDAVEYLQAGAAAVQVATRFTIARESGLPDEVKQHYINASPEDVEVNLSSPTGY
CCCCCCHHHHHHHHHCHHHHHHHHHHEEHHCCCCCHHHHHHHCCCCCCCEEEEECCCCCC
PMRMLKQSPTLYYSRKPNCEGLGYLLDNNGQCSYIDDYYEALESRNPAEGRFVVKNHTCL
HHHHHHCCCCEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEECCEEE
CTGMARYDCWTCGHTVSRLKETVNRLPDGSWQLPSAEDIFMDYLLSENHSIRKPEIKKQG
EECCHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNVNNFRLKLGGKEYIPIVIGGMGVNISTSELALSAERLGGIGHISDAEVMFVCDQLFGT
CCCCEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCHHHEEEHHHHCC
SYVADKRQMYASNVNNRDKSSVHFDLEQLAEAQKRFVSHTISQKTGNGAIFMNCMEKLTM
HHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHC
NNSAATLKVRMEAAMEAGIDGITLAAGLHLRSLDLISEHERFRDVKLGIVISSVRALSIF
CCCCEEEEEEEHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHH
LKRAMRLQRPPDYIVVEGPLAGGHLGFGPDDWQSQSLQSIVAETLAFLKKENLDIPIIPA
HHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECC
GGIFTGTDAVEYLQAGAAAVQVATRFTIARESGLPDEVKQHYINASPEDVEVNLSSPTGY
CCCCCCHHHHHHHHHCHHHHHHHHHHEEHHCCCCCHHHHHHHCCCCCCCEEEEECCCCCC
PMRMLKQSPTLYYSRKPNCEGLGYLLDNNGQCSYIDDYYEALESRNPAEGRFVVKNHTCL
HHHHHHCCCCEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEECCEEE
CTGMARYDCWTCGHTVSRLKETVNRLPDGSWQLPSAEDIFMDYLLSENHSIRKPEIKKQG
EECCHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA