| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is 21673236
Identifier: 21673236
GI number: 21673236
Start: 409924
End: 411009
Strand: Reverse
Name: 21673236
Synonym: CT0397
Alternate gene names: NA
Gene position: 411009-409924 (Counterclockwise)
Preceding gene: 21673237
Following gene: 21673235
Centisome position: 19.07
GC content: 55.99
Gene sequence:
>1086_bases TTGGATGGAAAGGAACAAGTGCGTCTCTCGCGCCTGTTCCGTCACCATGTTCCAACCAGAAAACAGCCTCCTTCCAACAT GAAGAAACAACTGCTCTCCTGGTTGAGGCTGTCTGCCTCGTTCATCATCCTTCTCCTGGCGGCCATTGCCGTCAACCAGC TCTACAGTCTTTCGGTAGTACTGAACGGCCTTCTCCCCTACTCCGGCTATGCATTCCTTGCCCTTTGGGTTCTCTTTTTC GCCGTTACGCTTTTCACCGGTTTGCGGCTCTGGAGCGCACCGAAAGCGCCTCCGCTGGCCGACCGGGTCGGAGGCAGCAA CTTCGAGCCGTATATCGCCTGGCTGGGCAAATCGCTCGCCGTGCACCACGCCCATCCTGACGGCGGCAGAAAGGAGCACG ACCTGCGCTGGATCAAGGCCAATATCAAACTCCACGAGGTCGATGCGCTCAACACAACCAAAACCGTAGCCACGAAAAAC TTCTTCATCGGCGCTTTCGCCCAGAATACCTCCTACGGCACGACGACATCGCTGGTCAACAACATCAAGCTTGTCTGGAA CATCTACGCGAGATACCACCACAAACACTCGATCAGGGAGTTCCTGCGACTGCTCAGATCGGTCTACGAGTGCCTGCCGC TGTCGGATTTCAACAAGGGTGAGCTTCCGGCGCACATCAAGCCGATCATCCAGTGCTCGTTCAGCAATACACTCTCCTCT TTGCTGCCGGGAGGAAACCTCCTGACACCATTCTTCCTGAACCTGTTCCTTGCGGGCGCAACCAACACCTACCTCACCTG CCTTGCCGGCATCATTGCCTCGAAGCACTGCCAGGTGCTCTCGCTCGAAGACAAGGAGGAGATTGTGCAGCAAAGCATGT TCGAAGCGGCATTCATGCTCAAAGAGATCGTCAAGGAATGCAACCCGATCCTCTCCGTCACCATCAGCAACGCCGTCAAG AAGGCGGGCATCGAAAGTCTCGACACCGTCACCGCGCCAACATCAAGCAGCAGCCTGGCGCAAGACATCGTCTCCCACCT CGCCAGCTCGATCAAGCACATTATTATGGAGAGCGGGAAAGAGTAA
Upstream 100 bases:
>100_bases GGACTACCTCCTGAGCGAAAACCACTCGATCAGAAAACCGGAGATCAAAAAGCAAGGGTGAGCGTCAGTCTTTTTGCCTC AGACAATCAGATAGCTTACC
Downstream 100 bases:
>100_bases GGGAGAATGATGAATTGAAAAGAGTGTCCCTGCCTCGGGGGGCGTCCTGTTCGGGCTGAAAAAAAATCGTCCAGCATTTG CCCAGACCCTTCTTTTTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MDGKEQVRLSRLFRHHVPTRKQPPSNMKKQLLSWLRLSASFIILLLAAIAVNQLYSLSVVLNGLLPYSGYAFLALWVLFF AVTLFTGLRLWSAPKAPPLADRVGGSNFEPYIAWLGKSLAVHHAHPDGGRKEHDLRWIKANIKLHEVDALNTTKTVATKN FFIGAFAQNTSYGTTTSLVNNIKLVWNIYARYHHKHSIREFLRLLRSVYECLPLSDFNKGELPAHIKPIIQCSFSNTLSS LLPGGNLLTPFFLNLFLAGATNTYLTCLAGIIASKHCQVLSLEDKEEIVQQSMFEAAFMLKEIVKECNPILSVTISNAVK KAGIESLDTVTAPTSSSSLAQDIVSHLASSIKHIIMESGKE
Sequences:
>Translated_361_residues MDGKEQVRLSRLFRHHVPTRKQPPSNMKKQLLSWLRLSASFIILLLAAIAVNQLYSLSVVLNGLLPYSGYAFLALWVLFF AVTLFTGLRLWSAPKAPPLADRVGGSNFEPYIAWLGKSLAVHHAHPDGGRKEHDLRWIKANIKLHEVDALNTTKTVATKN FFIGAFAQNTSYGTTTSLVNNIKLVWNIYARYHHKHSIREFLRLLRSVYECLPLSDFNKGELPAHIKPIIQCSFSNTLSS LLPGGNLLTPFFLNLFLAGATNTYLTCLAGIIASKHCQVLSLEDKEEIVQQSMFEAAFMLKEIVKECNPILSVTISNAVK KAGIESLDTVTAPTSSSSLAQDIVSHLASSIKHIIMESGKE >Mature_361_residues MDGKEQVRLSRLFRHHVPTRKQPPSNMKKQLLSWLRLSASFIILLLAAIAVNQLYSLSVVLNGLLPYSGYAFLALWVLFF AVTLFTGLRLWSAPKAPPLADRVGGSNFEPYIAWLGKSLAVHHAHPDGGRKEHDLRWIKANIKLHEVDALNTTKTVATKN FFIGAFAQNTSYGTTTSLVNNIKLVWNIYARYHHKHSIREFLRLLRSVYECLPLSDFNKGELPAHIKPIIQCSFSNTLSS LLPGGNLLTPFFLNLFLAGATNTYLTCLAGIIASKHCQVLSLEDKEEIVQQSMFEAAFMLKEIVKECNPILSVTISNAVK KAGIESLDTVTAPTSSSSLAQDIVSHLASSIKHIIMESGKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40096; Mature: 40096
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGKEQVRLSRLFRHHVPTRKQPPSNMKKQLLSWLRLSASFIILLLAAIAVNQLYSLSVV CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNGLLPYSGYAFLALWVLFFAVTLFTGLRLWSAPKAPPLADRVGGSNFEPYIAWLGKSLA HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHE VHHAHPDGGRKEHDLRWIKANIKLHEVDALNTTKTVATKNFFIGAFAQNTSYGTTTSLVN EEECCCCCCCCCHHHEEEEECCEEEEECCCCCHHHHHHCCCEEEEEECCCCCCHHHHHHH NIKLVWNIYARYHHKHSIREFLRLLRSVYECLPLSDFNKGELPAHIKPIIQCSFSNTLSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LLPGGNLLTPFFLNLFLAGATNTYLTCLAGIIASKHCQVLSLEDKEEIVQQSMFEAAFML HCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHH KEIVKECNPILSVTISNAVKKAGIESLDTVTAPTSSSSLAQDIVSHLASSIKHIIMESGK HHHHHHCCHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC E C >Mature Secondary Structure MDGKEQVRLSRLFRHHVPTRKQPPSNMKKQLLSWLRLSASFIILLLAAIAVNQLYSLSVV CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNGLLPYSGYAFLALWVLFFAVTLFTGLRLWSAPKAPPLADRVGGSNFEPYIAWLGKSLA HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHE VHHAHPDGGRKEHDLRWIKANIKLHEVDALNTTKTVATKNFFIGAFAQNTSYGTTTSLVN EEECCCCCCCCCHHHEEEEECCEEEEECCCCCHHHHHHCCCEEEEEECCCCCCHHHHHHH NIKLVWNIYARYHHKHSIREFLRLLRSVYECLPLSDFNKGELPAHIKPIIQCSFSNTLSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LLPGGNLLTPFFLNLFLAGATNTYLTCLAGIIASKHCQVLSLEDKEEIVQQSMFEAAFML HCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHH KEIVKECNPILSVTISNAVKKAGIESLDTVTAPTSSSSLAQDIVSHLASSIKHIIMESGK HHHHHHCCHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC E C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA