| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673234
Identifier: 21673234
GI number: 21673234
Start: 408451
End: 409248
Strand: Reverse
Name: 21673234
Synonym: CT0395
Alternate gene names: NA
Gene position: 409248-408451 (Counterclockwise)
Preceding gene: 21673235
Following gene: 161485729
Centisome position: 18.99
GC content: 57.14
Gene sequence:
>798_bases GTGGTTATGAAACAATATGTTATGGCGACAGCACTACTGTGCTACGCCGCTCCGGCTTACGCGGCCTATCCCCTCACGAC CGACGATACCGGCACCCAGGGCGCCGGCGGCTGGCAGATAGAGCTCCATACAGAATTTTCCACCAGCAGCAGGACCGATG GCGGCGTCCGCATCAAGGATCGTGAAGACGACGCGACAACGGTGATTTCGTATGGCGTCGCAAAGCGCATGGATGTTATT GTCACCTTGCCGTACCAGTGGTATCAGCATCGGCAAGGGCAGCTCGTTACCGACGATGAAAGCGGCATCGGCGATATGAC GGTCGAACTCAAGTGGCGCTTCCTGGAAAACGAAAAGAGTGGTCTCAGCCTTGCCGTGAAACCCGGCATTTCGTTGCCGA CCGGTGACGCCGACAGGGGCCTCGGTACTGGTCGGGTGACCGGCGGCGCGGTGCTGATCGCCACAAAAGAGTTCGGGGCG CTGACGCTGCACGCCAACGCCGGCTACCATCGCAACGCTTACGCACTTGACGCGGATGACGCAGCGTGCAACAAGGACAT CTGGAACGCATCCCTTGCGGGCGAATATGCGTTTTCGGAAAAGCTCAGGGCAGTTGCCGATATCGGTCTCGAAACGGCCA CAGAGAAGGGTTCACGCACACATCCTGCATTTCTTATTGGTGGACTGACTTACAGCATCACCAAAGATTTCGATTTCGAT TTTGGCATCAAGGGTGGTTTGAACGATGCCGAACCTGATACGGCTGTGCTGCTGGGCCTGGCCGCACGATTCAATTAA
Upstream 100 bases:
>100_bases CACTGTCAACACGATCATCAAGGGCATGACGGTTTTACCGTCGCCGGTCATCCGCTGACCGCCATTCCGTTCTGGCAACT CAACTGAAGCAAGAAAACAA
Downstream 100 bases:
>100_bases AGGAGGATAACCATGACCAATTTGAAATTCCGCTTTTTCGCCGTGGCCTCGATGGCCGTGGCTTTTATGCTCTTCGGTGG CGGCGAGGCTTATGCCATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MVMKQYVMATALLCYAAPAYAAYPLTTDDTGTQGAGGWQIELHTEFSTSSRTDGGVRIKDREDDATTVISYGVAKRMDVI VTLPYQWYQHRQGQLVTDDESGIGDMTVELKWRFLENEKSGLSLAVKPGISLPTGDADRGLGTGRVTGGAVLIATKEFGA LTLHANAGYHRNAYALDADDAACNKDIWNASLAGEYAFSEKLRAVADIGLETATEKGSRTHPAFLIGGLTYSITKDFDFD FGIKGGLNDAEPDTAVLLGLAARFN
Sequences:
>Translated_265_residues MVMKQYVMATALLCYAAPAYAAYPLTTDDTGTQGAGGWQIELHTEFSTSSRTDGGVRIKDREDDATTVISYGVAKRMDVI VTLPYQWYQHRQGQLVTDDESGIGDMTVELKWRFLENEKSGLSLAVKPGISLPTGDADRGLGTGRVTGGAVLIATKEFGA LTLHANAGYHRNAYALDADDAACNKDIWNASLAGEYAFSEKLRAVADIGLETATEKGSRTHPAFLIGGLTYSITKDFDFD FGIKGGLNDAEPDTAVLLGLAARFN >Mature_265_residues MVMKQYVMATALLCYAAPAYAAYPLTTDDTGTQGAGGWQIELHTEFSTSSRTDGGVRIKDREDDATTVISYGVAKRMDVI VTLPYQWYQHRQGQLVTDDESGIGDMTVELKWRFLENEKSGLSLAVKPGISLPTGDADRGLGTGRVTGGAVLIATKEFGA LTLHANAGYHRNAYALDADDAACNKDIWNASLAGEYAFSEKLRAVADIGLETATEKGSRTHPAFLIGGLTYSITKDFDFD FGIKGGLNDAEPDTAVLLGLAARFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28475; Mature: 28475
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMKQYVMATALLCYAAPAYAAYPLTTDDTGTQGAGGWQIELHTEFSTSSRTDGGVRIKD CCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEE REDDATTVISYGVAKRMDVIVTLPYQWYQHRQGQLVTDDESGIGDMTVELKWRFLENEKS CCCCCCEEEHHHHHCCEEEEEECCHHHHHCCCCCEEECCCCCCCCEEEEEEEEEECCCCC GLSLAVKPGISLPTGDADRGLGTGRVTGGAVLIATKEFGALTLHANAGYHRNAYALDADD CCEEEEECCCCCCCCCCCCCCCCCEECCCEEEEEEECCCEEEEEECCCCCCCEEEECCCC AACNKDIWNASLAGEYAFSEKLRAVADIGLETATEKGSRTHPAFLIGGLTYSITKDFDFD CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCCEEEEECEEEEEEECCCCC FGIKGGLNDAEPDTAVLLGLAARFN CCCCCCCCCCCCCCEEEEEEECCCC >Mature Secondary Structure MVMKQYVMATALLCYAAPAYAAYPLTTDDTGTQGAGGWQIELHTEFSTSSRTDGGVRIKD CCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEE REDDATTVISYGVAKRMDVIVTLPYQWYQHRQGQLVTDDESGIGDMTVELKWRFLENEKS CCCCCCEEEHHHHHCCEEEEEECCHHHHHCCCCCEEECCCCCCCCEEEEEEEEEECCCCC GLSLAVKPGISLPTGDADRGLGTGRVTGGAVLIATKEFGALTLHANAGYHRNAYALDADD CCEEEEECCCCCCCCCCCCCCCCCEECCCEEEEEEECCCEEEEEECCCCCCCEEEECCCC AACNKDIWNASLAGEYAFSEKLRAVADIGLETATEKGSRTHPAFLIGGLTYSITKDFDFD CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCCEEEEECEEEEEEECCCCC FGIKGGLNDAEPDTAVLLGLAARFN CCCCCCCCCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA