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The map label for this gene is cbiM [H]

Identifier: 161485729

GI number: 161485729

Start: 407683

End: 408354

Strand: Reverse

Name: cbiM [H]

Synonym: CT0394

Alternate gene names: 161485729

Gene position: 408354-407683 (Counterclockwise)

Preceding gene: 21673234

Following gene: 21673232

Centisome position: 18.95

GC content: 61.76

Gene sequence:

>672_bases
ATGCACATCATGGAGGGCTTCCTGCCGCCGGGCTGGAGCCTGTTCTGGTGGCTGGTGTCGCTGCCGTTTTTCGTGCTCGG
CTTCATCTCCCTGCGCCGGATCGTGGCGAGCAATCCGCGCATGAAGCTGCTGCTGGCCATGGCGGGGGCGTTCGCCTTCG
TGCTCTCATCGCTCAAGATTCCCTCCGTGACCGGGAGTTGCTCGCACCCGACCGGCGTCGGGCTTGGGGCGATCATGTTC
GGGCCGTCGGTGATGAGCGTGCTCGGCGCGATCGTGCTGCTCTTCCAGGCGCTGCTGCTGGCGCATGGTGGCTTGACCAC
GCTCGGCGCGAACGCATTTTCGATGGCGATTACCGGGCCGTTCGTGTCATGGGGTTTGTACAAACTTTTCGACAGTTTGC
GCTCGCCGCGCTGGCTGTCGGTCTTTGTCGCTGCTTCGATTGGCGATCTGGCAACTTACGTGGTCACCTCTTTTCAGCTC
GCCTTCGCGTTCCCTTCCATCACCGGCGGCGTTGTCGCTTCGGCGGTCAAGTTCCTCGGTATTTTCGCCATCACCCAGGT
TCCGCTCGCCGTGAGCGAGGGCATCCTGACGGTGATGGTCTATAACGCCATCATGGCCTACACGGGTCAATCATTCTTTG
GCGCGCAGTCGCTTTCCAGGGAGGTGAAGTGA

Upstream 100 bases:

>100_bases
TTAAAGGAGGATAACCATGACCAATTTGAAATTCCGCTTTTTCGCCGTGGCCTCGATGGCCGTGGCTTTTATGCTCTTCG
GTGGCGGCGAGGCTTATGCC

Downstream 100 bases:

>100_bases
TGACAAAAGCTTCGACAAAGAGCAATCTGCTCGTGAAAAATCTGTTGCTCGGTGTGCTGGTGATCGCGCTGGCCGCCGTA
CCGCTGATGAGCCTCAAACA

Product: cobalt transport protein CbiM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MHIMEGFLPPGWSLFWWLVSLPFFVLGFISLRRIVASNPRMKLLLAMAGAFAFVLSSLKIPSVTGSCSHPTGVGLGAIMF
GPSVMSVLGAIVLLFQALLLAHGGLTTLGANAFSMAITGPFVSWGLYKLFDSLRSPRWLSVFVAASIGDLATYVVTSFQL
AFAFPSITGGVVASAVKFLGIFAITQVPLAVSEGILTVMVYNAIMAYTGQSFFGAQSLSREVK

Sequences:

>Translated_223_residues
MHIMEGFLPPGWSLFWWLVSLPFFVLGFISLRRIVASNPRMKLLLAMAGAFAFVLSSLKIPSVTGSCSHPTGVGLGAIMF
GPSVMSVLGAIVLLFQALLLAHGGLTTLGANAFSMAITGPFVSWGLYKLFDSLRSPRWLSVFVAASIGDLATYVVTSFQL
AFAFPSITGGVVASAVKFLGIFAITQVPLAVSEGILTVMVYNAIMAYTGQSFFGAQSLSREVK
>Mature_223_residues
MHIMEGFLPPGWSLFWWLVSLPFFVLGFISLRRIVASNPRMKLLLAMAGAFAFVLSSLKIPSVTGSCSHPTGVGLGAIMF
GPSVMSVLGAIVLLFQALLLAHGGLTTLGANAFSMAITGPFVSWGLYKLFDSLRSPRWLSVFVAASIGDLATYVVTSFQL
AFAFPSITGGVVASAVKFLGIFAITQVPLAVSEGILTVMVYNAIMAYTGQSFFGAQSLSREVK

Specific function: Unknown

COG id: COG0310

COG function: function code P; ABC-type Co2+ transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiM family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002751
- InterPro:   IPR018024 [H]

Pfam domain/function: PF01891 CbiM [H]

EC number: NA

Molecular weight: Translated: 23698; Mature: 23698

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIMEGFLPPGWSLFWWLVSLPFFVLGFISLRRIVASNPRMKLLLAMAGAFAFVLSSLKI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
PSVTGSCSHPTGVGLGAIMFGPSVMSVLGAIVLLFQALLLAHGGLTTLGANAFSMAITGP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHCCCH
FVSWGLYKLFDSLRSPRWLSVFVAASIGDLATYVVTSFQLAFAFPSITGGVVASAVKFLG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IFAITQVPLAVSEGILTVMVYNAIMAYTGQSFFGAQSLSREVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MHIMEGFLPPGWSLFWWLVSLPFFVLGFISLRRIVASNPRMKLLLAMAGAFAFVLSSLKI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
PSVTGSCSHPTGVGLGAIMFGPSVMSVLGAIVLLFQALLLAHGGLTTLGANAFSMAITGP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHCCCH
FVSWGLYKLFDSLRSPRWLSVFVAASIGDLATYVVTSFQLAFAFPSITGGVVASAVKFLG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IFAITQVPLAVSEGILTVMVYNAIMAYTGQSFFGAQSLSREVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8501034; 11677609 [H]