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The map label for this gene is ybjY [C]

Identifier: 21673216

GI number: 21673216

Start: 389407

End: 390390

Strand: Direct

Name: ybjY [C]

Synonym: CT0377

Alternate gene names: 21673216

Gene position: 389407-390390 (Clockwise)

Preceding gene: 21673215

Following gene: 21673217

Centisome position: 18.07

GC content: 56.91

Gene sequence:

>984_bases
TTGAAAGCAGGTAAACCGCAACTCATCTGGGGGGCAGTGGCCGTCGTCATTGCTCTGGTCGCCGGTTCTGTTGTGTACAG
AACAGTGTTTGTCGGCAAGCCGAAAATTTCGTACCGCGAGTACCGCCCGGAGATTGGCGATATTCGCCAGCTGGTCTCCA
CCACGGCGACGATCACGCCGCAGAACAGGCTCGAAATCAAGTCGCCCGTGAGCGGACGCATCGACAAGATTCTGGTCAAG
GAGGGGGATTTCGTCAAAAAAGGCCAGGTGCTGGCGCTTGTTAGCTCTACGGAGCGGGCGGCGCTGCTCGATGCGGCTAC
GCTGAAGGGGCAGAGCGAGATCGACTACTGGAACAAGGTCTACAACCAGACCGCCCTCATTTCGCCCATCGACGGGCAGG
TGATCGTCAGCAGCCTCAATCCGGGCCAGACCATCACCACGAGCGATGCCGTGATGGTGCTCTCCGACCGGCTCATTGTG
AGGGCCAATGTCGATGAAACCGACATCGGGAACGTCAAGCTCGGCCAGAAGGCGGTAATCAGTCTCGATGCCTATCCCGA
CATCCACGTCGAAGGGGTGGTCGATCATATCTATTACGAATCGACGCTGGTCAACAACGTCAATATCTATCATGTCGATA
TCGTGCCCCGAAAGGTGCCCGAGGTGTTCAGGTCGGGCATGAGCGCCAATGTCGATATTGTCGTCAACGAAAAGGATCAC
GTACTCATGCTTCCGCTTGCCGCCGTCAAGAGCCGCAACAGCCATTCCTTTGTGCTGAAAAGAGTTGCAGCCCCCGATTC
GGTCAAGCGCACGCCAGTGCGGATCGGCCTGTCCGATGACAACAATGTGGAGATCGTCAGCGGGGTTTCTCCATCGGATG
TCATTCTGGTCAAAAATGCCGCCTACTCGCTGCCGAAAAACAGTGCGGGCACCAACCCATTCATGCCTCAGCGCAGGAGC
TCACAACAAAACCGGCAGCGATGA

Upstream 100 bases:

>100_bases
ATCGAAGACAATCTCGTCACCGCGAAAAAATCATATCTCAACGCCCAGTCCAATCTGCTGACCGCCGAGGCGGCCTGGGT
TCAGGCAAAAGGAGGCACTC

Downstream 100 bases:

>100_bases
TCGAAATCGTCAACGTTACCAAAACCTACCGGATCGGTGAGAGTTCGGTCAAGGCGCTTGACGGCGTGAGCCTGACGATT
GGACAGGGTGAGTTCGTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: RND Family Efflux Transporter MFP Subunit; Secretion Protein HlyD; Membrane-Fusion Protein; Periplasmic Component Of Efflux System; Efflux Transporter Rnd Family Mfp Subunit; HlyD Family Secretion Protein; Membrane Fusion Protein; Macrolide-Specific Efflux Protein; Biotin/Lipoyl Attachment Domain-Containing Protein; Efflux Transporter MFP Component RND Family; Secretion Protein HlyD Family Protein; PAS/PAC Sensor Protein; Membrane Permease Cation Efflux Pumps; Chemiosmotic Efflux System C Protein B; Secretion Protein Hlyd Family Protein; Protein Secretion Protein HylD Family; Permease; Secretion Protein Hlyd; ABC-Type Macrolide Exporter Membrane Component; Efflux Transporter; RND-Type Efflux Transporter Membrane-Fusion Protein; Acr Family Acridine Efflux Pump AcrA; Transmembrane Efflux Protein; RND Efflux Transporter; RND Family Efflux Pump Membrane Fusion Protein

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MKAGKPQLIWGAVAVVIALVAGSVVYRTVFVGKPKISYREYRPEIGDIRQLVSTTATITPQNRLEIKSPVSGRIDKILVK
EGDFVKKGQVLALVSSTERAALLDAATLKGQSEIDYWNKVYNQTALISPIDGQVIVSSLNPGQTITTSDAVMVLSDRLIV
RANVDETDIGNVKLGQKAVISLDAYPDIHVEGVVDHIYYESTLVNNVNIYHVDIVPRKVPEVFRSGMSANVDIVVNEKDH
VLMLPLAAVKSRNSHSFVLKRVAAPDSVKRTPVRIGLSDDNNVEIVSGVSPSDVILVKNAAYSLPKNSAGTNPFMPQRRS
SQQNRQR

Sequences:

>Translated_327_residues
MKAGKPQLIWGAVAVVIALVAGSVVYRTVFVGKPKISYREYRPEIGDIRQLVSTTATITPQNRLEIKSPVSGRIDKILVK
EGDFVKKGQVLALVSSTERAALLDAATLKGQSEIDYWNKVYNQTALISPIDGQVIVSSLNPGQTITTSDAVMVLSDRLIV
RANVDETDIGNVKLGQKAVISLDAYPDIHVEGVVDHIYYESTLVNNVNIYHVDIVPRKVPEVFRSGMSANVDIVVNEKDH
VLMLPLAAVKSRNSHSFVLKRVAAPDSVKRTPVRIGLSDDNNVEIVSGVSPSDVILVKNAAYSLPKNSAGTNPFMPQRRS
SQQNRQR
>Mature_327_residues
MKAGKPQLIWGAVAVVIALVAGSVVYRTVFVGKPKISYREYRPEIGDIRQLVSTTATITPQNRLEIKSPVSGRIDKILVK
EGDFVKKGQVLALVSSTERAALLDAATLKGQSEIDYWNKVYNQTALISPIDGQVIVSSLNPGQTITTSDAVMVLSDRLIV
RANVDETDIGNVKLGQKAVISLDAYPDIHVEGVVDHIYYESTLVNNVNIYHVDIVPRKVPEVFRSGMSANVDIVVNEKDH
VLMLPLAAVKSRNSHSFVLKRVAAPDSVKRTPVRIGLSDDNNVEIVSGVSPSDVILVKNAAYSLPKNSAGTNPFMPQRRS
SQQNRQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081796, Length=209, Percent_Identity=26.3157894736842, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35733; Mature: 35733

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAGKPQLIWGAVAVVIALVAGSVVYRTVFVGKPKISYREYRPEIGDIRQLVSTTATITP
CCCCCCCHHHHHHHHHHHHHHCHHHEEEEEECCCCCCHHHHCCCHHHHHHHHHHHEEECC
QNRLEIKSPVSGRIDKILVKEGDFVKKGQVLALVSSTERAALLDAATLKGQSEIDYWNKV
CCCEEECCCCCCCCEEEEECCCCCEECCCEEEEEECCCCHHHHHHHHCCCCCCHHHHHHH
YNQTALISPIDGQVIVSSLNPGQTITTSDAVMVLSDRLIVRANVDETDIGNVKLGQKAVI
HCCCEEEECCCCEEEEEECCCCCEEECCCEEEEEECCEEEEECCCCCCCCCEEECCEEEE
SLDAYPDIHVEGVVDHIYYESTLVNNVNIYHVDIVPRKVPEVFRSGMSANVDIVVNEKDH
EEECCCCEEHHHHHHHHEEHHEEECCCEEEEEEECCHHHHHHHHCCCCCCEEEEECCCCC
VLMLPLAAVKSRNSHSFVLKRVAAPDSVKRTPVRIGLSDDNNVEIVSGVSPSDVILVKNA
EEEEEHHHHHCCCCCHHHEEECCCCCCCCCCEEEEECCCCCCEEEEECCCCCCEEEEECC
AYSLPKNSAGTNPFMPQRRSSQQNRQR
CCCCCCCCCCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MKAGKPQLIWGAVAVVIALVAGSVVYRTVFVGKPKISYREYRPEIGDIRQLVSTTATITP
CCCCCCCHHHHHHHHHHHHHHCHHHEEEEEECCCCCCHHHHCCCHHHHHHHHHHHEEECC
QNRLEIKSPVSGRIDKILVKEGDFVKKGQVLALVSSTERAALLDAATLKGQSEIDYWNKV
CCCEEECCCCCCCCEEEEECCCCCEECCCEEEEEECCCCHHHHHHHHCCCCCCHHHHHHH
YNQTALISPIDGQVIVSSLNPGQTITTSDAVMVLSDRLIVRANVDETDIGNVKLGQKAVI
HCCCEEEECCCCEEEEEECCCCCEEECCCEEEEEECCEEEEECCCCCCCCCEEECCEEEE
SLDAYPDIHVEGVVDHIYYESTLVNNVNIYHVDIVPRKVPEVFRSGMSANVDIVVNEKDH
EEECCCCEEHHHHHHHHEEHHEEECCCEEEEEEECCHHHHHHHHCCCCCCEEEEECCCCC
VLMLPLAAVKSRNSHSFVLKRVAAPDSVKRTPVRIGLSDDNNVEIVSGVSPSDVILVKNA
EEEEEHHHHHCCCCCHHHEEECCCCCCCCCCEEEEECCCCCCEEEEECCCCCCEEEEECC
AYSLPKNSAGTNPFMPQRRSSQQNRQR
CCCCCCCCCCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA