| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is cusC [C]
Identifier: 21673215
GI number: 21673215
Start: 388110
End: 389420
Strand: Direct
Name: cusC [C]
Synonym: CT0376
Alternate gene names: 21673215
Gene position: 388110-389420 (Clockwise)
Preceding gene: 21673213
Following gene: 21673216
Centisome position: 18.01
GC content: 60.11
Gene sequence:
>1311_bases GTGTCTGTCAACGTGTTTATAAATTATATCCGGATCATGAGACGACTTCGCCGAACTTTTGTCATTGTAGCAGTGCTCTG TTTTGTCTGCCTGCCAAAGGCTCCCGTACTGGCTGTTGAAACGCTTGACTGGGCGCAGTGTCTTGCCGAAGCGGCCGGGC ATCATCCCGATCTGCGTTCGGCGGCGGAAAGCGTCCGGCAGTCCGAGGAGCAGCGAAATAGTGTCAAGGGTGGAATGCTT CCGTCCGTCAGCGCGTCGGCGGGGGGCGAACGTTCGGGTTCGAGCGCTGCGGCTCCGGTGGGGGCGTGGTCGTACGGCGT CAATGCGAGCCAGTTGCTCTACGATGGCGCGAAAACTTCCAGCGAGGTGAAGTCCGCTACCGAAACACTCAAGGCGTCGA AGTATAATGAAAGCAAGGTTTCTGTCGCTACGCGCTATGCTTTGCGCACGGCGTTCGTCCAGCTTCTGACCGCGCAGAAA CAGGTGGCGCTCGCAGAAGAGATTGCAACGAAAAGAAAGCAGGAGTTGCGCCTGGTCGCCCTGCTTTATAAATCGGGCAC GGAAAATATCGGCTCGCTCAGCAAAGCCCAGGCTGACCTCGGCGAGGCGGAGTTCGAGGTGGCGCAGGCAAGGCGCGCGC TCGATCTTGCTCAGATGGTACTTAGCACTCAGCTTGGTCGCCGCAGCTTCACGCCGATCCGCGTGACCGGGCAGTTCACG GCCAGCGAACAGACCCGCACACCGCCCGATTTCGACAGCATCGCACGGAACAATCCGGCCTACCTCGAACTCACCGCGCA AAAGAGTGCCGCCGGATACAGCTTGCAGGCAGCGCGGAGCGCGTTCATGCCGTCGGTTTACCTGAGCACCGGCTTCGGCA ATAGCGCATTCCGGCAGCTTCCGCCCGACCGCACCGACTGGCAGGCGGGCATCGACGTGTCGGTGCCGATCTACGCGGGC GGCTCCGGCAAGGCAGGCGTGGCCAAGGCGCGGGCGGTGGTTAACCAGTTGAGCGCCGACGAGGAGAGCCTTTATCTGTC GCTCAAACGGAGCCTTGCGCAGGCGTGGAAGACTTTCATCGACGCCTCCGGTAACGTGGATGTCCAGAAAAAATATCTCG ACGCCGCCTCCGAGCGGGCGCGCATCGCTGACGCGCAGTACTCGGCGGGACTGATTTCGTTCAACGACTGGACCATTATC GAAGACAATCTCGTCACCGCGAAAAAATCATATCTCAACGCCCAGTCCAATCTGCTGACCGCCGAGGCGGCCTGGGTTCA GGCAAAAGGAGGCACTCTTGAAAGCAGGTAA
Upstream 100 bases:
>100_bases TAAAGCGCCATGCCCTCTAAGGATTCCGGTTATGTGGCCGGTCTTTGGCTGTTTTTCCCATGGTCGCTGGAAACAGGAGG TTGCAGCGTCAAACCCGTGA
Downstream 100 bases:
>100_bases ACCGCAACTCATCTGGGGGGCAGTGGCCGTCGTCATTGCTCTGGTCGCCGGTTCTGTTGTGTACAGAACAGTGTTTGTCG GCAAGCCGAAAATTTCGTAC
Product: FusA/NodT family protein
Products: NA
Alternate protein names: FusA/NodT Family Protein; Outer Membrane Protein; Outer Membrane Efflux Protein lC
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MSVNVFINYIRIMRRLRRTFVIVAVLCFVCLPKAPVLAVETLDWAQCLAEAAGHHPDLRSAAESVRQSEEQRNSVKGGML PSVSASAGGERSGSSAAAPVGAWSYGVNASQLLYDGAKTSSEVKSATETLKASKYNESKVSVATRYALRTAFVQLLTAQK QVALAEEIATKRKQELRLVALLYKSGTENIGSLSKAQADLGEAEFEVAQARRALDLAQMVLSTQLGRRSFTPIRVTGQFT ASEQTRTPPDFDSIARNNPAYLELTAQKSAAGYSLQAARSAFMPSVYLSTGFGNSAFRQLPPDRTDWQAGIDVSVPIYAG GSGKAGVAKARAVVNQLSADEESLYLSLKRSLAQAWKTFIDASGNVDVQKKYLDAASERARIADAQYSAGLISFNDWTII EDNLVTAKKSYLNAQSNLLTAEAAWVQAKGGTLESR
Sequences:
>Translated_436_residues MSVNVFINYIRIMRRLRRTFVIVAVLCFVCLPKAPVLAVETLDWAQCLAEAAGHHPDLRSAAESVRQSEEQRNSVKGGML PSVSASAGGERSGSSAAAPVGAWSYGVNASQLLYDGAKTSSEVKSATETLKASKYNESKVSVATRYALRTAFVQLLTAQK QVALAEEIATKRKQELRLVALLYKSGTENIGSLSKAQADLGEAEFEVAQARRALDLAQMVLSTQLGRRSFTPIRVTGQFT ASEQTRTPPDFDSIARNNPAYLELTAQKSAAGYSLQAARSAFMPSVYLSTGFGNSAFRQLPPDRTDWQAGIDVSVPIYAG GSGKAGVAKARAVVNQLSADEESLYLSLKRSLAQAWKTFIDASGNVDVQKKYLDAASERARIADAQYSAGLISFNDWTII EDNLVTAKKSYLNAQSNLLTAEAAWVQAKGGTLESR >Mature_435_residues SVNVFINYIRIMRRLRRTFVIVAVLCFVCLPKAPVLAVETLDWAQCLAEAAGHHPDLRSAAESVRQSEEQRNSVKGGMLP SVSASAGGERSGSSAAAPVGAWSYGVNASQLLYDGAKTSSEVKSATETLKASKYNESKVSVATRYALRTAFVQLLTAQKQ VALAEEIATKRKQELRLVALLYKSGTENIGSLSKAQADLGEAEFEVAQARRALDLAQMVLSTQLGRRSFTPIRVTGQFTA SEQTRTPPDFDSIARNNPAYLELTAQKSAAGYSLQAARSAFMPSVYLSTGFGNSAFRQLPPDRTDWQAGIDVSVPIYAGG SGKAGVAKARAVVNQLSADEESLYLSLKRSLAQAWKTFIDASGNVDVQKKYLDAASERARIADAQYSAGLISFNDWTIIE DNLVTAKKSYLNAQSNLLTAEAAWVQAKGGTLESR
Specific function: In Pathogenic Strains It Allows The Bacteria To Invade Brain Microvascular Endothelial Cells (Bmec) Thus Allowing It To Cross The Blood-Brain Barrier And Cause Neonatal Meningitis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47013; Mature: 46881
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: PS00037 MYB_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVNVFINYIRIMRRLRRTFVIVAVLCFVCLPKAPVLAVETLDWAQCLAEAAGHHPDLRS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCHHH AAESVRQSEEQRNSVKGGMLPSVSASAGGERSGSSAAAPVGAWSYGVNASQLLYDGAKTS HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHCCCCCH SEVKSATETLKASKYNESKVSVATRYALRTAFVQLLTAQKQVALAEEIATKRKQELRLVA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLYKSGTENIGSLSKAQADLGEAEFEVAQARRALDLAQMVLSTQLGRRSFTPIRVTGQFT HHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEE ASEQTRTPPDFDSIARNNPAYLELTAQKSAAGYSLQAARSAFMPSVYLSTGFGNSAFRQL CCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCEEEEECCCCCHHHHHC PPDRTDWQAGIDVSVPIYAGGSGKAGVAKARAVVNQLSADEESLYLSLKRSLAQAWKTFI CCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH DASGNVDVQKKYLDAASERARIADAQYSAGLISFNDWTIIEDNLVTAKKSYLNAQSNLLT CCCCCCHHHHHHHHHHHHHHHHHCCHHCCCEEEECCEEEEECCHHHHHHHHHHHHHCEEE AEAAWVQAKGGTLESR EHHHEEEECCCCCCCC >Mature Secondary Structure SVNVFINYIRIMRRLRRTFVIVAVLCFVCLPKAPVLAVETLDWAQCLAEAAGHHPDLRS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCHHH AAESVRQSEEQRNSVKGGMLPSVSASAGGERSGSSAAAPVGAWSYGVNASQLLYDGAKTS HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHCCCCCH SEVKSATETLKASKYNESKVSVATRYALRTAFVQLLTAQKQVALAEEIATKRKQELRLVA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLYKSGTENIGSLSKAQADLGEAEFEVAQARRALDLAQMVLSTQLGRRSFTPIRVTGQFT HHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEE ASEQTRTPPDFDSIARNNPAYLELTAQKSAAGYSLQAARSAFMPSVYLSTGFGNSAFRQL CCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCEEEEECCCCCHHHHHC PPDRTDWQAGIDVSVPIYAGGSGKAGVAKARAVVNQLSADEESLYLSLKRSLAQAWKTFI CCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH DASGNVDVQKKYLDAASERARIADAQYSAGLISFNDWTIIEDNLVTAKKSYLNAQSNLLT CCCCCCHHHHHHHHHHHHHHHHHCCHHCCCEEEECCEEEEECCHHHHHHHHHHHHHCEEE AEAAWVQAKGGTLESR EHHHEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA