| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is fabI [H]
Identifier: 21673189
GI number: 21673189
Start: 365181
End: 366062
Strand: Direct
Name: fabI [H]
Synonym: CT0350
Alternate gene names: 21673189
Gene position: 365181-366062 (Clockwise)
Preceding gene: 21673188
Following gene: 21673190
Centisome position: 16.95
GC content: 53.74
Gene sequence:
>882_bases ATGCCCGAGAAAGCGCACTATGGTCTTTTGAAAGGGAAAAAAGGAATTGTTTTTGGCCCGCTCGATGAAAGCAGCATCGG TTGGCAGATTGCACTTCATGCTTACCGGGAAGGCGCACAGGTCGCCCTTTCCAATGTCGCGACAGCCATTCGCTTCGGCA AGCTGCAGGAGCTGTCCGAGCTTTGCGGCAATGCACCGATTCTGATCTGCGATGCGTCCAAGAACGAAGAGGTAGATAAT ACTTTCAGGGAACTCAAGGAGACCATGGGTTCTGTCGATTTTATTGTGCATTCGATCGGCATGTCCCAGAATATTCGCAA ACAGGTGCCCTACGAGGAACTGAACTACGAGTGGTTCATGCGGACGCTCGATGTTTCCGGCATTTCGTTCCACCGGCTCG TGGCCTATGCGCTGAAGAACGAGGCGCTCAATGACGGCGCAAGCATTGTCGCGCTTTCATACATCGCGTCGCAGCGCAAC TACTGGACCTATTCGGACATGGGCGACGCTAAGTCGCTGCTCGAATCGATTGCACGCAGCTTCGGCCCGAGACTGGCACC CCGTGGCATCCGGATCAACACGATTTCACAGAGCCCGACCTACACGAAAGCCGGCAGCGGTATTCCCGGTTTCGAGAAGA TGTATGATTACAGTGAACTGATGTCGCCGCTCGGTAACGCGAGTGCTGAAGAGTGCGCCGAGTACACCATGACGATCCTG AGCGATCTGACGCGCAAGGTGACCATGCAGAACCTTTTCCATGATGGCGGTTACAGCTCGATGGGTGCAACCATTCCTAT GATCAAGCTTGCTCATGAGGCTCTTCATGACAAGGAGCTTGCCGAAAGAGTTGGACTCGAAGGCCGTCATTCATCAAGGT AA
Upstream 100 bases:
>100_bases CTGTTTAACAATTCACCGGAAACTTGTATCTTGACAGCTTTGAACGATCATCAAAGGGGTATCCGCTACCCTTATTTTCT GAATAGAATCAGATTGTATC
Downstream 100 bases:
>100_bases GCATTGATGGAGCGCCGGCTTCCGCTGGCCTCCCGTTTTCCTTCATCACTTCCATACCCATTCGTCTTTGGCCTTGCTGA CCAGGGCTAGAAGGTAGGTA
Product: enoyl-(acyl-carrier-protein) reductase
Products: NA
Alternate protein names: NADH-dependent enoyl-ACP reductase 1 [H]
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MPEKAHYGLLKGKKGIVFGPLDESSIGWQIALHAYREGAQVALSNVATAIRFGKLQELSELCGNAPILICDASKNEEVDN TFRELKETMGSVDFIVHSIGMSQNIRKQVPYEELNYEWFMRTLDVSGISFHRLVAYALKNEALNDGASIVALSYIASQRN YWTYSDMGDAKSLLESIARSFGPRLAPRGIRINTISQSPTYTKAGSGIPGFEKMYDYSELMSPLGNASAEECAEYTMTIL SDLTRKVTMQNLFHDGGYSSMGATIPMIKLAHEALHDKELAERVGLEGRHSSR
Sequences:
>Translated_293_residues MPEKAHYGLLKGKKGIVFGPLDESSIGWQIALHAYREGAQVALSNVATAIRFGKLQELSELCGNAPILICDASKNEEVDN TFRELKETMGSVDFIVHSIGMSQNIRKQVPYEELNYEWFMRTLDVSGISFHRLVAYALKNEALNDGASIVALSYIASQRN YWTYSDMGDAKSLLESIARSFGPRLAPRGIRINTISQSPTYTKAGSGIPGFEKMYDYSELMSPLGNASAEECAEYTMTIL SDLTRKVTMQNLFHDGGYSSMGATIPMIKLAHEALHDKELAERVGLEGRHSSR >Mature_292_residues PEKAHYGLLKGKKGIVFGPLDESSIGWQIALHAYREGAQVALSNVATAIRFGKLQELSELCGNAPILICDASKNEEVDNT FRELKETMGSVDFIVHSIGMSQNIRKQVPYEELNYEWFMRTLDVSGISFHRLVAYALKNEALNDGASIVALSYIASQRNY WTYSDMGDAKSLLESIARSFGPRLAPRGIRINTISQSPTYTKAGSGIPGFEKMYDYSELMSPLGNASAEECAEYTMTILS DLTRKVTMQNLFHDGGYSSMGATIPMIKLAHEALHDKELAERVGLEGRHSSR
Specific function: Fatty acid biosynthesis pathway; second reduction step. [C]
COG id: COG0623
COG function: function code I; Enoyl-[acyl-carrier-protein] reductase (NADH)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787545, Length=254, Percent_Identity=31.496062992126, Blast_Score=121, Evalue=5e-29,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR014358 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.9 [H]
Molecular weight: Translated: 32445; Mature: 32314
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEKAHYGLLKGKKGIVFGPLDESSIGWQIALHAYREGAQVALSNVATAIRFGKLQELSE CCCCCCCCHHCCCCCCEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LCGNAPILICDASKNEEVDNTFRELKETMGSVDFIVHSIGMSQNIRKQVPYEELNYEWFM HHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHCHHHHH RTLDVSGISFHRLVAYALKNEALNDGASIVALSYIASQRNYWTYSDMGDAKSLLESIARS HHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH FGPRLAPRGIRINTISQSPTYTKAGSGIPGFEKMYDYSELMSPLGNASAEECAEYTMTIL HCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH SDLTRKVTMQNLFHDGGYSSMGATIPMIKLAHEALHDKELAERVGLEGRHSSR HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PEKAHYGLLKGKKGIVFGPLDESSIGWQIALHAYREGAQVALSNVATAIRFGKLQELSE CCCCCCCHHCCCCCCEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LCGNAPILICDASKNEEVDNTFRELKETMGSVDFIVHSIGMSQNIRKQVPYEELNYEWFM HHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHCHHHHH RTLDVSGISFHRLVAYALKNEALNDGASIVALSYIASQRNYWTYSDMGDAKSLLESIARS HHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH FGPRLAPRGIRINTISQSPTYTKAGSGIPGFEKMYDYSELMSPLGNASAEECAEYTMTIL HCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH SDLTRKVTMQNLFHDGGYSSMGATIPMIKLAHEALHDKELAERVGLEGRHSSR HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]