Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is doc

Identifier: 21673172

GI number: 21673172

Start: 348464

End: 348847

Strand: Direct

Name: doc

Synonym: CT0333

Alternate gene names: NA

Gene position: 348464-348847 (Clockwise)

Preceding gene: 21673171

Following gene: 21673173

Centisome position: 16.17

GC content: 51.82

Gene sequence:

>384_bases
ATGAGATTTCTGGACCTTCACGAGGTTCTGCACATCCATCGCGATCAGATCACCCGTTATGGCGGAACGCTCGGCGTCCG
GGATATGGGCCTGCTCACCTCGGCGATTGCCATGCCGACGGCGATGTTCAAAGGCGATTTTCTGCATACCGACATTTATG
AAATGGCTGCGGCATACCTTTTCCACTTGGTGAGGAATCACCCGTTTCTTGACGGAAACAAACGGGTTGGCGCGGTGTCA
GCCATCGTTTTCCTCGCGTTGAACGGATACGATTTCGAAGCGCCGGAAAATGATCTCGTCGAAATGGTTTACGGCGTGGC
GAGAAGTGAGTTTGAAAAATCTGATGTTGCGCTGTTTATGAGGAGATGGAGCGTGAAATGGTGA

Upstream 100 bases:

>100_bases
GCCGTTGAAAAATCCCAAAGGGGGCGAGGCGTTCGGTGTGGCGCTTGAAAAGGTGAATACCCGTTATGCCAGGGCGTTGA
AAAAACTTGCAGAATAGGTG

Downstream 100 bases:

>100_bases
TTGTGGATGAGCAGTTGCATAACGTAACACTCAGGGGAAACCAAGGCTTTTCCTGACGCACATGGCTCTGAGGCCTTGAT
TTCATAAGTCCCTTTCTATT

Product: Doc protein

Products: NA

Alternate protein names: Death On Curing Protein; Death-On-Curing Protein; Prophage Maintenance System Killer Protein; Phage Death On Curing Protein; Xin-Antitoxin System Toxin Component Fic Family; Fic Family xin-Antitoxin System Toxin Component; Death On Curing xin Protein Doc; Filamentation Induced By CAMP Protein Fic; Death-On-Curing Protein DOC; Death ON Curing Protein; Doc Protein; Phage Maintenance Killer Protein; Bacteriophage Protein; Addiction Module xin

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MRFLDLHEVLHIHRDQITRYGGTLGVRDMGLLTSAIAMPTAMFKGDFLHTDIYEMAAAYLFHLVRNHPFLDGNKRVGAVS
AIVFLALNGYDFEAPENDLVEMVYGVARSEFEKSDVALFMRRWSVKW

Sequences:

>Translated_127_residues
MRFLDLHEVLHIHRDQITRYGGTLGVRDMGLLTSAIAMPTAMFKGDFLHTDIYEMAAAYLFHLVRNHPFLDGNKRVGAVS
AIVFLALNGYDFEAPENDLVEMVYGVARSEFEKSDVALFMRRWSVKW
>Mature_127_residues
MRFLDLHEVLHIHRDQITRYGGTLGVRDMGLLTSAIAMPTAMFKGDFLHTDIYEMAAAYLFHLVRNHPFLDGNKRVGAVS
AIVFLALNGYDFEAPENDLVEMVYGVARSEFEKSDVALFMRRWSVKW

Specific function: Unknown

COG id: COG3654

COG function: function code R; Prophage maintenance system killer protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14554; Mature: 14554

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLDLHEVLHIHRDQITRYGGTLGVRDMGLLTSAIAMPTAMFKGDFLHTDIYEMAAAYL
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
FHLVRNHPFLDGNKRVGAVSAIVFLALNGYDFEAPENDLVEMVYGVARSEFEKSDVALFM
HHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHH
RRWSVKW
HHHCCCC
>Mature Secondary Structure
MRFLDLHEVLHIHRDQITRYGGTLGVRDMGLLTSAIAMPTAMFKGDFLHTDIYEMAAAYL
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
FHLVRNHPFLDGNKRVGAVSAIVFLALNGYDFEAPENDLVEMVYGVARSEFEKSDVALFM
HHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHH
RRWSVKW
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA