Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21673112

Identifier: 21673112

GI number: 21673112

Start: 284649

End: 286193

Strand: Direct

Name: 21673112

Synonym: CT0273

Alternate gene names: NA

Gene position: 284649-286193 (Clockwise)

Preceding gene: 21673111

Following gene: 21673113

Centisome position: 13.21

GC content: 57.93

Gene sequence:

>1545_bases
ATGTTCTCCAAACTCAAGCTTCTCGCGAAGGATACGGTCATCTATGGCGCGAGCACCATTCTGGCCCGCAGTCTTAACTA
CGTTCTTGTTCCGCTCTACGCCAACAAGCTAACCACCTTCGACAATGGCATCCAGGCGGTGATTTATGCCAACATCGCCC
TGGCGAATGTCATTTTCACCTACGGTCTCGAAACCTCTTACCTGAAGGTCGCCTCCGACGTCATCAAACGGAACGAGGAT
GAACGTCCGCTGTTTTCGACGGCTTTTTTCAGCCTCTTTGTTACCTCAATCCTTTTTTCGGCGCTGATGCTGCTCTTTGC
GCCGTCGATTGCCGTAGCCATCGGACTTGCACCGGAGTCTGGGGTGTTCATCCGTTACGCCGCAGCGATCCTGTTTCTCG
ATACGCTGCTCGTCGTGCCATTTGCCGAACTTCGGCTGAAGCGCAAGGCGATCCCGTTTGCGCTGGCCAAGGTGATGGGC
GTGGTCGGCGGCGTCATCAGCACCTTTGTGCTCATTCTCGGACTTCATGCGGGTCTGTCCGGCGTGTTCATCGGCGAGGC
GCTCGGCTCGGTGGTCAGCCTGCTGTTCATTCTGCCGGTACTCAAAAATCTCAAACCCACGTTCTCGCCCGGCATGTGCC
GGCAGTTGCTTGGCATTGGTTTGCCCTACGTGCCGACCGGCATCGCTGGCCTGCTCATCCACCTGATCGACCGGAATCTC
CTGATCCGCATTCCGCAGCAGGACATCGACCGCCTGTATGGCGCGGGGTTCCAGGCTTCGGATATCACCGGTATCTATGG
TCGGGTGGCGGCGTTTGGCGTGGCGCTCCAGATGTTCATCCAGATTTTCCGCTTCGCCTGGCAGCCGTTTTTCCTGCAAC
ATGCTGACGATCCCGAAGCCAAGCCGCTCTTCAAGCAGGTGATGAATCTTTCGGGCATTGCAGTGATTGTGCTTGCCGTG
GCCTGCACTTTTTTTGTGCCCGATCTGGTGCGCTACCACTGGGGCGGCAAGCTCTATCTGTTGCCGCCGAAATACTGGAT
GGGCATGTCGATTCTGCCGTGGATCTTTTTCAGTTACGTGTTCGACATGATTTCAACCAACCTGTCGGCAGGCATTCTGA
TTACCGGCAAGACCAAATATCTGCCGGTCGTGACCTTCGCGGGAGCCGCCGTGACGACGCTCGGGTGCTGGATTCTGATT
CCGCTTGGCGGCATGGATGGCGCGGCGGTGGCGATTCTGCTCGGCGCGGCGGTGATGTGCCTCTGCATGGGGTGGTACTC
GGTGCGCTTCTACCCGATCAGTTACGATTGGGGCCGCCTGTCACTCTTGCTCGGCGCGGGGCTGGCGTTCGCAGTATGGC
ATGACGACCTGCTCGTCTGGCTTGCCGGTTTCGGGATCAGCGGCCTGCTTGCGATGATGGTGAAACTGCTCATCGTCTTG
CTCTATCTCGTGCTCGGCACGCTCATTTTCCGCAACGAGGCGTCGGCTGTCGTGAAGATGGTGCAGAGAAAATTGCGTCC
GGCGGGAAGTTCCGGCAGCCGATGA

Upstream 100 bases:

>100_bases
GGACGCCGTCCGGCAGCAGAAAGCGGCGGCAGCCAAAACCAACGGCTCGACTGGCCCGGCGACCGGTAAGAACTGACCGC
GACCTCCAGCAGCCCAACGA

Downstream 100 bases:

>100_bases
TCCGTCTCGCCACCGTCCAGTTTACGCCACGTCTCGGGGAGCGCCAGGCGAATCTCGAAGCGATCCGGAGTTTGCTCGAT
CCGGTCGAAGCGGACATTGT

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: O-Antigen And Teichoic Acid Export Protein; Multi Anti Extrusion Protein MatE; Polysaccharide Biosynthesis Transmembrane Protein; Polysaccharide Biosynthesis Protein Wzx

Number of amino acids: Translated: 514; Mature: 514

Protein sequence:

>514_residues
MFSKLKLLAKDTVIYGASTILARSLNYVLVPLYANKLTTFDNGIQAVIYANIALANVIFTYGLETSYLKVASDVIKRNED
ERPLFSTAFFSLFVTSILFSALMLLFAPSIAVAIGLAPESGVFIRYAAAILFLDTLLVVPFAELRLKRKAIPFALAKVMG
VVGGVISTFVLILGLHAGLSGVFIGEALGSVVSLLFILPVLKNLKPTFSPGMCRQLLGIGLPYVPTGIAGLLIHLIDRNL
LIRIPQQDIDRLYGAGFQASDITGIYGRVAAFGVALQMFIQIFRFAWQPFFLQHADDPEAKPLFKQVMNLSGIAVIVLAV
ACTFFVPDLVRYHWGGKLYLLPPKYWMGMSILPWIFFSYVFDMISTNLSAGILITGKTKYLPVVTFAGAAVTTLGCWILI
PLGGMDGAAVAILLGAAVMCLCMGWYSVRFYPISYDWGRLSLLLGAGLAFAVWHDDLLVWLAGFGISGLLAMMVKLLIVL
LYLVLGTLIFRNEASAVVKMVQRKLRPAGSSGSR

Sequences:

>Translated_514_residues
MFSKLKLLAKDTVIYGASTILARSLNYVLVPLYANKLTTFDNGIQAVIYANIALANVIFTYGLETSYLKVASDVIKRNED
ERPLFSTAFFSLFVTSILFSALMLLFAPSIAVAIGLAPESGVFIRYAAAILFLDTLLVVPFAELRLKRKAIPFALAKVMG
VVGGVISTFVLILGLHAGLSGVFIGEALGSVVSLLFILPVLKNLKPTFSPGMCRQLLGIGLPYVPTGIAGLLIHLIDRNL
LIRIPQQDIDRLYGAGFQASDITGIYGRVAAFGVALQMFIQIFRFAWQPFFLQHADDPEAKPLFKQVMNLSGIAVIVLAV
ACTFFVPDLVRYHWGGKLYLLPPKYWMGMSILPWIFFSYVFDMISTNLSAGILITGKTKYLPVVTFAGAAVTTLGCWILI
PLGGMDGAAVAILLGAAVMCLCMGWYSVRFYPISYDWGRLSLLLGAGLAFAVWHDDLLVWLAGFGISGLLAMMVKLLIVL
LYLVLGTLIFRNEASAVVKMVQRKLRPAGSSGSR
>Mature_514_residues
MFSKLKLLAKDTVIYGASTILARSLNYVLVPLYANKLTTFDNGIQAVIYANIALANVIFTYGLETSYLKVASDVIKRNED
ERPLFSTAFFSLFVTSILFSALMLLFAPSIAVAIGLAPESGVFIRYAAAILFLDTLLVVPFAELRLKRKAIPFALAKVMG
VVGGVISTFVLILGLHAGLSGVFIGEALGSVVSLLFILPVLKNLKPTFSPGMCRQLLGIGLPYVPTGIAGLLIHLIDRNL
LIRIPQQDIDRLYGAGFQASDITGIYGRVAAFGVALQMFIQIFRFAWQPFFLQHADDPEAKPLFKQVMNLSGIAVIVLAV
ACTFFVPDLVRYHWGGKLYLLPPKYWMGMSILPWIFFSYVFDMISTNLSAGILITGKTKYLPVVTFAGAAVTTLGCWILI
PLGGMDGAAVAILLGAAVMCLCMGWYSVRFYPISYDWGRLSLLLGAGLAFAVWHDDLLVWLAGFGISGLLAMMVKLLIVL
LYLVLGTLIFRNEASAVVKMVQRKLRPAGSSGSR

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55984; Mature: 55984

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSKLKLLAKDTVIYGASTILARSLNYVLVPLYANKLTTFDNGIQAVIYANIALANVIFT
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHCHHHHHCCCCHHHHHHHHHHHHHHHH
YGLETSYLKVASDVIKRNEDERPLFSTAFFSLFVTSILFSALMLLFAPSIAVAIGLAPES
HCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEECCCCC
GVFIRYAAAILFLDTLLVVPFAELRLKRKAIPFALAKVMGVVGGVISTFVLILGLHAGLS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GVFIGEALGSVVSLLFILPVLKNLKPTFSPGMCRQLLGIGLPYVPTGIAGLLIHLIDRNL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
LIRIPQQDIDRLYGAGFQASDITGIYGRVAAFGVALQMFIQIFRFAWQPFFLQHADDPEA
EEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCCCC
KPLFKQVMNLSGIAVIVLAVACTFFVPDLVRYHWGGKLYLLPPKYWMGMSILPWIFFSYV
CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHCCHHHHHHHHHHHH
FDMISTNLSAGILITGKTKYLPVVTFAGAAVTTLGCWILIPLGGMDGAAVAILLGAAVMC
HHHHHCCCCCCEEEECCCCEEEHEEECHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHH
LCMGWYSVRFYPISYDWGRLSLLLGAGLAFAVWHDDLLVWLAGFGISGLLAMMVKLLIVL
HHHHHHHEEEEEEECCHHHHHHHHHCCHHEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LYLVLGTLIFRNEASAVVKMVQRKLRPAGSSGSR
HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MFSKLKLLAKDTVIYGASTILARSLNYVLVPLYANKLTTFDNGIQAVIYANIALANVIFT
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHCHHHHHCCCCHHHHHHHHHHHHHHHH
YGLETSYLKVASDVIKRNEDERPLFSTAFFSLFVTSILFSALMLLFAPSIAVAIGLAPES
HCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEECCCCC
GVFIRYAAAILFLDTLLVVPFAELRLKRKAIPFALAKVMGVVGGVISTFVLILGLHAGLS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GVFIGEALGSVVSLLFILPVLKNLKPTFSPGMCRQLLGIGLPYVPTGIAGLLIHLIDRNL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
LIRIPQQDIDRLYGAGFQASDITGIYGRVAAFGVALQMFIQIFRFAWQPFFLQHADDPEA
EEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCCCC
KPLFKQVMNLSGIAVIVLAVACTFFVPDLVRYHWGGKLYLLPPKYWMGMSILPWIFFSYV
CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHCCHHHHHHHHHHHH
FDMISTNLSAGILITGKTKYLPVVTFAGAAVTTLGCWILIPLGGMDGAAVAILLGAAVMC
HHHHHCCCCCCEEEECCCCEEEHEEECHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHH
LCMGWYSVRFYPISYDWGRLSLLLGAGLAFAVWHDDLLVWLAGFGISGLLAMMVKLLIVL
HHHHHHHEEEEEEECCHHHHHHHHHCCHHEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LYLVLGTLIFRNEASAVVKMVQRKLRPAGSSGSR
HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA