Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21673104

Identifier: 21673104

GI number: 21673104

Start: 276298

End: 276912

Strand: Direct

Name: 21673104

Synonym: CT0265

Alternate gene names: NA

Gene position: 276298-276912 (Clockwise)

Preceding gene: 21673103

Following gene: 21673107

Centisome position: 12.82

GC content: 52.68

Gene sequence:

>615_bases
ATGCACAAACTTCAGGTTGATATTCTCGGATTGTCAACGAGTCCGCATACCAACGGCGCCTACGCCTTGATTCTTTATGA
AGTAGAAGGCAAACGCAAATTGCCGATCATTATTGGTGGGTTCGAGGCCCAGGCTATTGCGCTCAAGCTCGAAAACATAA
AGCCGCCTCGCCCGTTCACTCATGACCTGTTCAAGCAAGTTGCCGATGCTTTTGATCTTCATGTCAATGAAGTGCTCATT
GATGAACTGCACAACGAAACCTTTTATGCGAAAGTTATCTGTGAGATGGGGGGAGTGGTGCATGAAATTGATGCGAGGCC
GAGCGATGCCATTGCTATAGCGGTTCGTTTCAGTGCTCCGATTTTCGTTTCGGAAGAGATCATGAACGAGGCGGGCATTG
TCGAAGAGCGGCCCAAAGAGGATGAAGAGCAGCCTGCCGCCGAAGAGGTTGTCGAGCATCAGGGGGCAGCGCCGGAACCG
GCCCAGGGCGAATCCGTTGCCGAGGAGCTGAACCGGAAGCTCGAAGAGGCGATCAACCGTGAAGATTACGAGGAGGCGGC
GCGAATAAGAGACGAGCTTTTGCGTCTCAGGAAGGGCGGTAAAGGTGAGGCATAG

Upstream 100 bases:

>100_bases
AAGCGCTCCTCTTTGATTGAGAAATGTTTAACGGTACTTTTTCGTTACAGACTCACGGCATAACACCGCTTCCGTTGAAA
CGATAACTGTTCCTGACATT

Downstream 100 bases:

>100_bases
CCTCCATTAGTGTGCCCGCCAAATCCTTTCGGAGCCATAAAAAAGCCATGACTAAAAACTTTTTAGTCATGGCTTTTTTA
GTTTCCAGAAAAGAGCGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MHKLQVDILGLSTSPHTNGAYALILYEVEGKRKLPIIIGGFEAQAIALKLENIKPPRPFTHDLFKQVADAFDLHVNEVLI
DELHNETFYAKVICEMGGVVHEIDARPSDAIAIAVRFSAPIFVSEEIMNEAGIVEERPKEDEEQPAAEEVVEHQGAAPEP
AQGESVAEELNRKLEEAINREDYEEAARIRDELLRLRKGGKGEA

Sequences:

>Translated_204_residues
MHKLQVDILGLSTSPHTNGAYALILYEVEGKRKLPIIIGGFEAQAIALKLENIKPPRPFTHDLFKQVADAFDLHVNEVLI
DELHNETFYAKVICEMGGVVHEIDARPSDAIAIAVRFSAPIFVSEEIMNEAGIVEERPKEDEEQPAAEEVVEHQGAAPEP
AQGESVAEELNRKLEEAINREDYEEAARIRDELLRLRKGGKGEA
>Mature_204_residues
MHKLQVDILGLSTSPHTNGAYALILYEVEGKRKLPIIIGGFEAQAIALKLENIKPPRPFTHDLFKQVADAFDLHVNEVLI
DELHNETFYAKVICEMGGVVHEIDARPSDAIAIAVRFSAPIFVSEEIMNEAGIVEERPKEDEEQPAAEEVVEHQGAAPEP
AQGESVAEELNRKLEEAINREDYEEAARIRDELLRLRKGGKGEA

Specific function: Unknown

COG id: COG1259

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003729 [H]

Pfam domain/function: PF02577 DUF151 [H]

EC number: NA

Molecular weight: Translated: 22685; Mature: 22685

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: PS50151 UVR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKLQVDILGLSTSPHTNGAYALILYEVEGKRKLPIIIGGFEAQAIALKLENIKPPRPFT
CCEEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCCHH
HDLFKQVADAFDLHVNEVLIDELHNETFYAKVICEMGGVVHEIDARPSDAIAIAVRFSAP
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEECCCCCCCEEEEEEEECCC
IFVSEEIMNEAGIVEERPKEDEEQPAAEEVVEHQGAAPEPAQGESVAEELNRKLEEAINR
EEEHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC
EDYEEAARIRDELLRLRKGGKGEA
CCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MHKLQVDILGLSTSPHTNGAYALILYEVEGKRKLPIIIGGFEAQAIALKLENIKPPRPFT
CCEEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCCHH
HDLFKQVADAFDLHVNEVLIDELHNETFYAKVICEMGGVVHEIDARPSDAIAIAVRFSAP
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEECCCCCCCEEEEEEEECCC
IFVSEEIMNEAGIVEERPKEDEEQPAAEEVVEHQGAAPEPAQGESVAEELNRKLEEAINR
EEEHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC
EDYEEAARIRDELLRLRKGGKGEA
CCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]