| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is folC [H]
Identifier: 21673102
GI number: 21673102
Start: 272797
End: 273975
Strand: Direct
Name: folC [H]
Synonym: CT0263
Alternate gene names: 21673102
Gene position: 272797-273975 (Clockwise)
Preceding gene: 21673101
Following gene: 21673103
Centisome position: 12.66
GC content: 62.43
Gene sequence:
>1179_bases GTGCATGTCGCCGGAACCAACGGCAAGGGCACGGTAGCTTCGTGCGTTGCTTCGATTTTCAGCACCTCGGGCCGCAAAAC CGGCCTGTTCACATCGCCGCACCTGGTCGATTTCACGGAGCGGATCCGCATCGACGGCCAGCAGATTGGCCAGGCGCGAG TCGCTGAATATTGTACCAAGCTGCAACCGGCGGTCGAAACGGGCGCGACCTTTTTCGAAACGACCACGGCGATGGCGTTT GCCTTTTTCGCCGACGAAGGCGTCGATGCCGCGGTGATCGAAACCGGCATGGGGGGGCGGCTCGATGCGACCAATGTCGT GCAACCGGAGATTGTTATCATTCCGAGCATCGGCATGGATCACACCGAGTGGCTCGGCGGGAGCCTTCGCGAAATAGCCG CCGAGAAGGCGGCGATCATCAAGCGGTGCTCGCGCGTTTTCACCGCCGTGCCGGAAGCGGGCGAGGCGTTCGCGCCGATC CGCGAGGCCGCCGAAGCGGTGGGCGCGGAGCTGCATCAGGTTGAGCGGGAGGCGGAGTGTTTGGTGGAGGAGGTTTGCCC GGGCGCTCTCGCCCTGCGAATTTCGCTCGATGGTGGCGAGTCGCGGCAGTTTCGGGCTGCGCTCACCGGCTCATTCCATG CGCCGAACGTTTGCCTTGCCGTCATGGCCGCCCGTTCCGAGGGGATCTCGTGGGAGCATATCGATGATGGGCTGGCAAGG CTTGGCGCTTCGGGTTACCGGGCACGCCTGGAACGAATCGCGGACAAACCGGTGGTGATGCTTGATGTCTCCCACAATCC GGAAGGGATGCAGAAAACCGCGCAGTCGATTCTGGAGCTTCGAAACTGCTTCCGCTTCCTGTACGTGATCATTGGCGTTG CGGCCGACAAGGATGCTGCCGGTATCGTTCACCATATCGCGCCGATTGCCGACGAAATTGTCGCTGTGGATCTGCCGGTG GAGCGGAGTCTTCAGGCGGAGGTGCTCGAGCGGTTGTGCGTGGAAGCCGGGGCGCAGTATGTCAGCTCGCGCCACTCGGC TGCCGAGGCGCTGGAATTTCTCGATCAGCGCGTCGAACCCGAAGATATGATTCTGGTGACGGGTTCTTTCTATCTTTCCG GAGAGGTGGCGGCGATGGAGCGGTTTCGTTCACCGGGTGCATCGGCCGGCGCGATATGA
Upstream 100 bases:
>100_bases CCTGTTTCCCCTTCATCGTTTTGGCATCAAACCCGGCCTTGAACGTATCGAAGCGCTGCTCGACGTGCTCGGTCATCCGG AGCGCAAACTCGGCACCATT
Downstream 100 bases:
>100_bases TTCATCTGTTTTTACATAAAATATTTTATATTCGTGTTGACCTCTGAGATTCTCCAGCCAAGGCAGGAGCCTTCCGCTGG CGGTTCTCCTGGTAAATACC
Product: folylpolyglutamate synthase
Products: NA
Alternate protein names: Folylpoly-gamma-glutamate synthetase; FPGS; Tetrahydrofolate synthase; Tetrahydrofolylpolyglutamate synthase [H]
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MHVAGTNGKGTVASCVASIFSTSGRKTGLFTSPHLVDFTERIRIDGQQIGQARVAEYCTKLQPAVETGATFFETTTAMAF AFFADEGVDAAVIETGMGGRLDATNVVQPEIVIIPSIGMDHTEWLGGSLREIAAEKAAIIKRCSRVFTAVPEAGEAFAPI REAAEAVGAELHQVEREAECLVEEVCPGALALRISLDGGESRQFRAALTGSFHAPNVCLAVMAARSEGISWEHIDDGLAR LGASGYRARLERIADKPVVMLDVSHNPEGMQKTAQSILELRNCFRFLYVIIGVAADKDAAGIVHHIAPIADEIVAVDLPV ERSLQAEVLERLCVEAGAQYVSSRHSAAEALEFLDQRVEPEDMILVTGSFYLSGEVAAMERFRSPGASAGAI
Sequences:
>Translated_392_residues MHVAGTNGKGTVASCVASIFSTSGRKTGLFTSPHLVDFTERIRIDGQQIGQARVAEYCTKLQPAVETGATFFETTTAMAF AFFADEGVDAAVIETGMGGRLDATNVVQPEIVIIPSIGMDHTEWLGGSLREIAAEKAAIIKRCSRVFTAVPEAGEAFAPI REAAEAVGAELHQVEREAECLVEEVCPGALALRISLDGGESRQFRAALTGSFHAPNVCLAVMAARSEGISWEHIDDGLAR LGASGYRARLERIADKPVVMLDVSHNPEGMQKTAQSILELRNCFRFLYVIIGVAADKDAAGIVHHIAPIADEIVAVDLPV ERSLQAEVLERLCVEAGAQYVSSRHSAAEALEFLDQRVEPEDMILVTGSFYLSGEVAAMERFRSPGASAGAI >Mature_392_residues MHVAGTNGKGTVASCVASIFSTSGRKTGLFTSPHLVDFTERIRIDGQQIGQARVAEYCTKLQPAVETGATFFETTTAMAF AFFADEGVDAAVIETGMGGRLDATNVVQPEIVIIPSIGMDHTEWLGGSLREIAAEKAAIIKRCSRVFTAVPEAGEAFAPI REAAEAVGAELHQVEREAECLVEEVCPGALALRISLDGGESRQFRAALTGSFHAPNVCLAVMAARSEGISWEHIDDGLAR LGASGYRARLERIADKPVVMLDVSHNPEGMQKTAQSILELRNCFRFLYVIIGVAADKDAAGIVHHIAPIADEIVAVDLPV ERSLQAEVLERLCVEAGAQYVSSRHSAAEALEFLDQRVEPEDMILVTGSFYLSGEVAAMERFRSPGASAGAI
Specific function: Conversion of folates to polyglutamate derivatives. It preferes 5,10-methylenetetrahydrofolate, rather than 10- formyltetrahydrofolate as folate substrate [H]
COG id: COG0285
COG function: function code H; Folylpolyglutamate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the folylpolyglutamate synthase family [H]
Homologues:
Organism=Homo sapiens, GI66932990, Length=211, Percent_Identity=34.5971563981043, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI66932984, Length=211, Percent_Identity=34.5971563981043, Blast_Score=120, Evalue=2e-27, Organism=Escherichia coli, GI1788654, Length=373, Percent_Identity=31.9034852546917, Blast_Score=147, Evalue=1e-36, Organism=Caenorhabditis elegans, GI17553150, Length=435, Percent_Identity=25.7471264367816, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17553148, Length=435, Percent_Identity=25.7471264367816, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71984923, Length=435, Percent_Identity=25.7471264367816, Blast_Score=113, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6323760, Length=179, Percent_Identity=37.4301675977654, Blast_Score=111, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6324815, Length=243, Percent_Identity=29.2181069958848, Blast_Score=105, Evalue=1e-23, Organism=Drosophila melanogaster, GI24641571, Length=182, Percent_Identity=39.5604395604396, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI24581568, Length=178, Percent_Identity=34.2696629213483, Blast_Score=102, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018109 - InterPro: IPR001645 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.17 [H]
Molecular weight: Translated: 41871; Mature: 41871
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS01012 FOLYLPOLYGLU_SYNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVAGTNGKGTVASCVASIFSTSGRKTGLFTSPHLVDFTERIRIDGQQIGQARVAEYCTK CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHH LQPAVETGATFFETTTAMAFAFFADEGVDAAVIETGMGGRLDATNVVQPEIVIIPSIGMD HCHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHEECCCCCCCCCCCCCCCCEEEECCCCCC HTEWLGGSLREIAAEKAAIIKRCSRVFTAVPEAGEAFAPIREAAEAVGAELHQVEREAEC HHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LVEEVCPGALALRISLDGGESRQFRAALTGSFHAPNVCLAVMAARSEGISWEHIDDGLAR HHHHHCCCEEEEEEEECCCCCCEEHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH LGASGYRARLERIADKPVVMLDVSHNPEGMQKTAQSILELRNCFRFLYVIIGVAADKDAA HCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH GIVHHIAPIADEIVAVDLPVERSLQAEVLERLCVEAGAQYVSSRHSAAEALEFLDQRVEP HHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EDMILVTGSFYLSGEVAAMERFRSPGASAGAI CCEEEEEECEEECCHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MHVAGTNGKGTVASCVASIFSTSGRKTGLFTSPHLVDFTERIRIDGQQIGQARVAEYCTK CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHH LQPAVETGATFFETTTAMAFAFFADEGVDAAVIETGMGGRLDATNVVQPEIVIIPSIGMD HCHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHEECCCCCCCCCCCCCCCCEEEECCCCCC HTEWLGGSLREIAAEKAAIIKRCSRVFTAVPEAGEAFAPIREAAEAVGAELHQVEREAEC HHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LVEEVCPGALALRISLDGGESRQFRAALTGSFHAPNVCLAVMAARSEGISWEHIDDGLAR HHHHHCCCEEEEEEEECCCCCCEEHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH LGASGYRARLERIADKPVVMLDVSHNPEGMQKTAQSILELRNCFRFLYVIIGVAADKDAA HCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH GIVHHIAPIADEIVAVDLPVERSLQAEVLERLCVEAGAQYVSSRHSAAEALEFLDQRVEP HHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EDMILVTGSFYLSGEVAAMERFRSPGASAGAI CCEEEEEECEEECCHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8419299; 9384377; 2553669 [H]