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The map label for this gene is rpsT

Identifier: 21673100

GI number: 21673100

Start: 271656

End: 271934

Strand: Direct

Name: rpsT

Synonym: CT0261

Alternate gene names: 21673100

Gene position: 271656-271934 (Clockwise)

Preceding gene: 21673097

Following gene: 21673101

Centisome position: 12.61

GC content: 53.05

Gene sequence:

>279_bases
ATGCCTCTACACAAATCAGCCGAAAAAAGACTCAGACAGGCAGCGCGCAGAAATGAAAGGAACCGTGCCCGTAAAAAGGA
ACTCAAGGGCGTTTTGAAGAATATGCAGAAGCTGATCGACGCCAACGCAGCAAAGAGCGAAGTCGAGGCGGCATACAAGG
CTGCCGTGCAAAAGCTTGACAGACTTGGCGTGAAGCGCTACATCCACCCCAACAAGGCGTCGCGCAAGAAAGCACAGCTG
ACCAAAGCGCTCAACAACTACACGCCGACTGCTAGCTGA

Upstream 100 bases:

>100_bases
TTTCGATATTTTTTAATTTTCGAGCCGGGTTCGTATATTAAATGCCTTTTGTTGCGGATACCGCACACTCTTAACAAGCA
TATTATAACAGCACAAGGTT

Downstream 100 bases:

>100_bases
TCATCGGGCTTCTGCAAGCGTGCCGCGAGCGGGCGATGTTTCATATTCAGTCATACCCGGCCAGCAGCTGGCGCTTTGAA
GGCGCTAAGAGTTCGCAAAC

Product: 30S ribosomal protein S20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 91

Protein sequence:

>92_residues
MPLHKSAEKRLRQAARRNERNRARKKELKGVLKNMQKLIDANAAKSEVEAAYKAAVQKLDRLGVKRYIHPNKASRKKAQL
TKALNNYTPTAS

Sequences:

>Translated_92_residues
MPLHKSAEKRLRQAARRNERNRARKKELKGVLKNMQKLIDANAAKSEVEAAYKAAVQKLDRLGVKRYIHPNKASRKKAQL
TKALNNYTPTAS
>Mature_91_residues
PLHKSAEKRLRQAARRNERNRARKKELKGVLKNMQKLIDANAAKSEVEAAYKAAVQKLDRLGVKRYIHPNKASRKKAQLT
KALNNYTPTAS

Specific function: Binds directly to 16S ribosomal RNA

COG id: COG0268

COG function: function code J; Ribosomal protein S20

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S20P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS20_CHLTE (Q8KFR1)

Other databases:

- EMBL:   AE006470
- RefSeq:   NP_661165.1
- ProteinModelPortal:   Q8KFR1
- SMR:   Q8KFR1
- GeneID:   1007778
- GenomeReviews:   AE006470_GR
- KEGG:   cte:CT0261
- NMPDR:   fig|194439.1.peg.259
- TIGR:   CT0261
- HOGENOM:   HBG734145
- OMA:   MPLHKSA
- ProtClustDB:   PRK00239
- BioCyc:   CTEP194439:CT_0261-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00500
- InterPro:   IPR002583
- Gene3D:   G3DSA:1.20.58.110
- ProDom:   PD004231
- TIGRFAMs:   TIGR00029

Pfam domain/function: PF01649 Ribosomal_S20p; SSF46992 Ribosomal_S20p

EC number: NA

Molecular weight: Translated: 10480; Mature: 10349

Theoretical pI: Translated: 11.60; Mature: 11.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLHKSAEKRLRQAARRNERNRARKKELKGVLKNMQKLIDANAAKSEVEAAYKAAVQKLD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RLGVKRYIHPNKASRKKAQLTKALNNYTPTAS
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PLHKSAEKRLRQAARRNERNRARKKELKGVLKNMQKLIDANAAKSEVEAAYKAAVQKLD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RLGVKRYIHPNKASRKKAQLTKALNNYTPTAS
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901