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The map label for this gene is fni

Identifier: 21673096

GI number: 21673096

Start: 265679

End: 266752

Strand: Reverse

Name: fni

Synonym: CT0257

Alternate gene names: 21673096

Gene position: 266752-265679 (Counterclockwise)

Preceding gene: 21673098

Following gene: 21673095

Centisome position: 12.38

GC content: 62.29

Gene sequence:

>1074_bases
ATGCAAGAAGCCAGCGCAGCCATAACCGCCGAACGCAAGCATAGCCACGTCGATATCTGCCTTAACCGGCCGGTCTGTTT
CGACGGGCAGGATACTGGTCTTGATTCCTGGAGATTTGAGCACAACGCCGCGCCCGAAGTCGATTTTGCGCAGATCGACC
TTTCGACGGAGTTTCTCGGCCATGCTATCGGTTTGCCGCTGATGATCTCTTCGATGACCGGAGGTTACGGTAATGCACTC
GCCCTGAACCGTGCTCTTGGCGAAGCGGCCGAGCGCTTCCGCATCCCGCTCGGCGTGGGCAGCATGCGCCAGGCGCTCGA
AGGTTCATCGCATCGCGAAAGCTTCTCGGTCGTGCGTTCGTCGGCTCCCTCGGTGCCGATCTTCGCCAATATCGGCGCGC
CCGAAGTAGCCGCCGGACTGAGCCGTGATCAGCTCTCGACATTGATCGATCTGATCGAGGCCAACGGGCTCATCGTGCAT
CTCAATCCGGCGCAGGAGCTGTTCCAGCCGGAGGGCGGCACCGACTTCAGCGGATTTCTCGACCGGCTGCACGACATCAC
CGCCACCATCGGCGTGCCGGTCATCGCCAAGGAGGTGGGCTGCGGCATCTCGGCGACCGTCGCCCGGAAACTCGCCGACG
CGGGCGTCAGGGCCATCGACGTGGCCGGAGCGGGCGGCATCAGCTGGCAGAAGGTCGAAGAGTGTCGCTACCTCGACCGC
TTCGGCCACGAGGAGCGCTTCAGCCCATCGGCGCTCGATGAATTTCTGAACTGGGGCATCCCGACCGCCGAGTGCCTAAC
CAGTATCCAGACGCTGAAACGGCAAAACCCGGAGTACGACGCACTCAGCGTCATCTCGTCGGGCGGCATCCGCAACGGAC
TCGACATCGCCAAATCAATCGCACTCGGCGCCAACATCGCGGCCTCCGCGCAGCACCTGCTCAAGGCCCTGCACTCGGGG
ACGCTTGAAGAGACGATCCGGACATGGGCAAACGATCTTCGGGCGGCCATGTTCCTGACCGGATCGGCCACCATCGAACA
GCTTAAACACGCACGAATCTACCGTAAACCCTGA

Upstream 100 bases:

>100_bases
AAACCGGACAAGCCCGAAAAAAGTTATGGTATATTTGCCATAAGTTATACTTTACAGAGCACCTCTAAAAATTGTTCAAC
CCGGGAGCCGCTATCCGTCA

Downstream 100 bases:

>100_bases
CGACAGCAGTCATGTCCTCACCGATTACCCAAGCACAGGTTGAAAGCAAGTACCGGCAATACCATGCAAAGATCAACGAA
GCGCTTGCCGCCTGCTTTCC

Product: isopentenyl pyrophosphate isomerase

Products: NA

Alternate protein names: IPP isomerase; Isopentenyl pyrophosphate isomerase

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MQEASAAITAERKHSHVDICLNRPVCFDGQDTGLDSWRFEHNAAPEVDFAQIDLSTEFLGHAIGLPLMISSMTGGYGNAL
ALNRALGEAAERFRIPLGVGSMRQALEGSSHRESFSVVRSSAPSVPIFANIGAPEVAAGLSRDQLSTLIDLIEANGLIVH
LNPAQELFQPEGGTDFSGFLDRLHDITATIGVPVIAKEVGCGISATVARKLADAGVRAIDVAGAGGISWQKVEECRYLDR
FGHEERFSPSALDEFLNWGIPTAECLTSIQTLKRQNPEYDALSVISSGGIRNGLDIAKSIALGANIAASAQHLLKALHSG
TLEETIRTWANDLRAAMFLTGSATIEQLKHARIYRKP

Sequences:

>Translated_357_residues
MQEASAAITAERKHSHVDICLNRPVCFDGQDTGLDSWRFEHNAAPEVDFAQIDLSTEFLGHAIGLPLMISSMTGGYGNAL
ALNRALGEAAERFRIPLGVGSMRQALEGSSHRESFSVVRSSAPSVPIFANIGAPEVAAGLSRDQLSTLIDLIEANGLIVH
LNPAQELFQPEGGTDFSGFLDRLHDITATIGVPVIAKEVGCGISATVARKLADAGVRAIDVAGAGGISWQKVEECRYLDR
FGHEERFSPSALDEFLNWGIPTAECLTSIQTLKRQNPEYDALSVISSGGIRNGLDIAKSIALGANIAASAQHLLKALHSG
TLEETIRTWANDLRAAMFLTGSATIEQLKHARIYRKP
>Mature_357_residues
MQEASAAITAERKHSHVDICLNRPVCFDGQDTGLDSWRFEHNAAPEVDFAQIDLSTEFLGHAIGLPLMISSMTGGYGNAL
ALNRALGEAAERFRIPLGVGSMRQALEGSSHRESFSVVRSSAPSVPIFANIGAPEVAAGLSRDQLSTLIDLIEANGLIVH
LNPAQELFQPEGGTDFSGFLDRLHDITATIGVPVIAKEVGCGISATVARKLADAGVRAIDVAGAGGISWQKVEECRYLDR
FGHEERFSPSALDEFLNWGIPTAECLTSIQTLKRQNPEYDALSVISSGGIRNGLDIAKSIALGANIAASAQHLLKALHSG
TLEETIRTWANDLRAAMFLTGSATIEQLKHARIYRKP

Specific function: Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)

COG id: COG1304

COG function: function code C; L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IPP isomerase type 2 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): IDI2_CHLTE (Q8KFR5)

Other databases:

- EMBL:   AE006470
- RefSeq:   NP_661161.1
- ProteinModelPortal:   Q8KFR5
- SMR:   Q8KFR5
- GeneID:   1007766
- GenomeReviews:   AE006470_GR
- KEGG:   cte:CT0257
- NMPDR:   fig|194439.1.peg.255
- TIGR:   CT0257
- HOGENOM:   HBG354479
- OMA:   GSQRAAI
- ProtClustDB:   PRK05437
- BioCyc:   CTEP194439:CT_0257-MONOMER
- BRENDA:   5.3.3.2
- GO:   GO:0005737
- HAMAP:   MF_00354
- InterPro:   IPR013785
- InterPro:   IPR000262
- InterPro:   IPR011179
- Gene3D:   G3DSA:3.20.20.70
- PANTHER:   PTHR10578:SF3
- PIRSF:   PIRSF003314
- TIGRFAMs:   TIGR02151

Pfam domain/function: PF01070 FMN_dh

EC number: =5.3.3.2

Molecular weight: Translated: 38266; Mature: 38266

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEASAAITAERKHSHVDICLNRPVCFDGQDTGLDSWRFEHNAAPEVDFAQIDLSTEFLG
CCCCHHHHHHHCCCCCEEEEECCCEEECCCCCCCCCCEECCCCCCCCCCEEEECHHHHHH
HAIGLPLMISSMTGGYGNALALNRALGEAAERFRIPLGVGSMRQALEGSSHRESFSVVRS
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHH
SAPSVPIFANIGAPEVAAGLSRDQLSTLIDLIEANGLIVHLNPAQELFQPEGGTDFSGFL
CCCCCCEEECCCCHHHHHCCCHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCCCCHHHHH
DRLHDITATIGVPVIAKEVGCGISATVARKLADAGVRAIDVAGAGGISWQKVEECRYLDR
HHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHH
FGHEERFSPSALDEFLNWGIPTAECLTSIQTLKRQNPEYDALSVISSGGIRNGLDIAKSI
CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHH
ALGANIAASAQHLLKALHSGTLEETIRTWANDLRAAMFLTGSATIEQLKHARIYRKP
HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQEASAAITAERKHSHVDICLNRPVCFDGQDTGLDSWRFEHNAAPEVDFAQIDLSTEFLG
CCCCHHHHHHHCCCCCEEEEECCCEEECCCCCCCCCCEECCCCCCCCCCEEEECHHHHHH
HAIGLPLMISSMTGGYGNALALNRALGEAAERFRIPLGVGSMRQALEGSSHRESFSVVRS
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHH
SAPSVPIFANIGAPEVAAGLSRDQLSTLIDLIEANGLIVHLNPAQELFQPEGGTDFSGFL
CCCCCCEEECCCCHHHHHCCCHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCCCCHHHHH
DRLHDITATIGVPVIAKEVGCGISATVARKLADAGVRAIDVAGAGGISWQKVEECRYLDR
HHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHH
FGHEERFSPSALDEFLNWGIPTAECLTSIQTLKRQNPEYDALSVISSGGIRNGLDIAKSI
CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHH
ALGANIAASAQHLLKALHSGTLEETIRTWANDLRAAMFLTGSATIEQLKHARIYRKP
HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901