| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673092
Identifier: 21673092
GI number: 21673092
Start: 262200
End: 262631
Strand: Reverse
Name: 21673092
Synonym: CT0253
Alternate gene names: NA
Gene position: 262631-262200 (Counterclockwise)
Preceding gene: 21673093
Following gene: 21673091
Centisome position: 12.19
GC content: 50.69
Gene sequence:
>432_bases ATGCCTTCCCAGGAAAGCTGGAATGTCACCCTGGTGGTTTCTGACAATGGCAGAACCAAAACGATTGTCAGCGCCCGTCA TGCAGCTGAATACCGTCAGGGAGAGAAACAGGAAATCCGGCTCGATGGAGGAATCAACGTACAACTGATCAACCGTGATG GCAGCGTAACCCTGATAACGGCAGGTCGAGGCATCGTGCATGACAATCAGGATATCGAAGCATTCGATAACGTCGTCATC CGTTCAGCGGACAACACGGTCATTCGCACCGAACATATCTCCCGATCAAGCAGCAACCGTATGATACGGTCCGACAAATA TGTCACCATTTCAGGCCCCTCCCGTACCATACGAGGCTATGGCTTTGAAAGCGATGACGCCATGAAACGGTACAGGATTT TCCATGCCAGCGGTGAAGCCTTATCAAAATAA
Upstream 100 bases:
>100_bases GACAACTTTTTTTTCTCTGGCAATAGTGTTCGGTGCCGCTGGCTGTAGTGCTCCCAAAAAGGAGGCTCGCACGCCGGCGG CTGCTGTTTACGCAAAAGAT
Downstream 100 bases:
>100_bases TTCGACTCTGTTTGCGTCGTTATGAAATTACACATGCTCAAATCCAAGATCCACAACGCCATTGTCACCAGTGGAGACCT GGAATACGAAGGAAGCATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MPSQESWNVTLVVSDNGRTKTIVSARHAAEYRQGEKQEIRLDGGINVQLINRDGSVTLITAGRGIVHDNQDIEAFDNVVI RSADNTVIRTEHISRSSSNRMIRSDKYVTISGPSRTIRGYGFESDDAMKRYRIFHASGEALSK
Sequences:
>Translated_143_residues MPSQESWNVTLVVSDNGRTKTIVSARHAAEYRQGEKQEIRLDGGINVQLINRDGSVTLITAGRGIVHDNQDIEAFDNVVI RSADNTVIRTEHISRSSSNRMIRSDKYVTISGPSRTIRGYGFESDDAMKRYRIFHASGEALSK >Mature_142_residues PSQESWNVTLVVSDNGRTKTIVSARHAAEYRQGEKQEIRLDGGINVQLINRDGSVTLITAGRGIVHDNQDIEAFDNVVIR SADNTVIRTEHISRSSSNRMIRSDKYVTISGPSRTIRGYGFESDDAMKRYRIFHASGEALSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15967; Mature: 15836
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSQESWNVTLVVSDNGRTKTIVSARHAAEYRQGEKQEIRLDGGINVQLINRDGSVTLIT CCCCCCCEEEEEEECCCCEEEEEEHHHHHHHHCCCCEEEEECCCCEEEEECCCCCEEEEE AGRGIVHDNQDIEAFDNVVIRSADNTVIRTEHISRSSSNRMIRSDKYVTISGPSRTIRGY CCCCEEECCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCEEECCCEEEEECCCCEEEEC GFESDDAMKRYRIFHASGEALSK CCCCCCCCEEEEEEECCCHHHCC >Mature Secondary Structure PSQESWNVTLVVSDNGRTKTIVSARHAAEYRQGEKQEIRLDGGINVQLINRDGSVTLIT CCCCCCEEEEEEECCCCEEEEEEHHHHHHHHCCCCEEEEECCCCEEEEECCCCCEEEEE AGRGIVHDNQDIEAFDNVVIRSADNTVIRTEHISRSSSNRMIRSDKYVTISGPSRTIRGY CCCCEEECCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCEEECCCEEEEECCCCEEEEC GFESDDAMKRYRIFHASGEALSK CCCCCCCCEEEEEEECCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA