| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is surA [H]
Identifier: 21673044
GI number: 21673044
Start: 214100
End: 216202
Strand: Direct
Name: surA [H]
Synonym: CT0203
Alternate gene names: 21673044
Gene position: 214100-216202 (Clockwise)
Preceding gene: 21673043
Following gene: 21673051
Centisome position: 9.94
GC content: 58.2
Gene sequence:
>2103_bases ATGGCACTAATGAGCAAGTTGAGGGATAAAACGCACATCGTGTTGTTTGTCCTCGTGGCGGCGTTCCTTGCCCTGATCGT TTTCGAGTGGGGGATGAACTTCACCGGCCCCACCAGAAAAGCGGGCGTAGCCGGGAAGGTCAATGGCGAGTCGATCTCCA TGAATGAATACGAAGCGTTGTACAACAACATTGTCGCCGGGTTCCGGCAGAGCAATCCAGGCGTAGAAATCACCTCCGGC CTCGACGCGAAGTTTCGCGAGCAGGCCTGGAACTATGTTGTCGATCAGACGCTTCTTGCCCAGCTTCTCAAGAAATATGG CATCACCGTCACCGACCAGGAGGTGCTCGACGCGGTCAATAATCCCGTCAATCCGCCAGCGATCATTCGCCAGAACTTCA CCGATCCCAGGACTGGCAAGATCGACCGCCAGTTGCTTGAACAGGCGCGTAGCGATCCGAAAGCCAAAGATTTCTGGCTC AACGCCCAGGAGGCGATCAAGCGCGAACTGATGGTCAACAAGCTGGTTATGACACTGAGGACCATGGTTTTCGTTACCGA TCCCGAGCTTACTGAAGTGGTGCAGCGCCAGTTCACCACCTTTGCCGGTTCGTTTATTCCCTTTCCGTACAGCTATGCGG GCGCGGAAACCAATTTTCCGGTCAAAGATGACGAGATCAAGGCCTGGTACGACTCTCACAAGGAGCAGTTCCGGGAGGAG CCGGTGCGTAGCGCTGAGTTTGTCTTTTTCCCGTTGACTCCCTCCAGGCAGGATAGCCTTCAGGTTAAAAAGGAGATCGA CGGGCTGATTCCGCAGTTCGCTGCGGCAAAGAGCGACAGCGAGTTCGTCAAGATTCAGAGCGACCTGCCGAATTCGGCGA ATGTTACGCTTTCAAGAGCGGACTTTTCGCCCGCCGCAGGGCAGGCGCTGTTCAGCTCGCCGAAGCTCGTGCCCGGCCAG ATTGTCGGCCCCATCGCCGACGAGGGCTACTACCGCTTGCTCAAGATTAAGAGCGTCACGACCGGCGAACCGGTTGCGAG CGCCTCGCACATTCTGATTCGCCTTAATCCGGCGGACAAGGCCGAGGCCGCGCGCGCCATGGGCCTGCTCAAAAAGATTT CCGAGGAGCTGAAGGGAGGCGCGTCATTCGCCTCGCTGGCCGCTAAATATTCCGAGGATCCCGGCAGCGCCCGCAACGGC GGTTTTGTTGGCTGGTTCACCAAGGATCGCATGGTGCCCCAGTTCGCCCAGGCGGTCTTTGCCGGCAAGCCCGGTCAGAT CGTCGGGCCGGTGCAGACCCAGTTCGGCCTGCATATCATCAAGATCGAAGGGTTTGACAACCGGCGCATCGTCTGCTCGG AGGTCGCCCGCCAGATCAAGGCATCGACGCAGACCTCCGAAACGATCAAGCGTCAAGCGCAGGCTTTCCTGACCGAGGCA AAGTCGAAGGGATTTGAAGCGGCGGCGAAGGCGCAGAGGCTCGAAGTGGGCAAAACCGGCGACTTTACGCGCCAGAGCCT GCTCGCCGTGCCGGGCATGGGCGAGGCGATTACTGGCTTCGCATTCAAGGCCAAAGATAGTGATATTTCCGACGTGCTCG ATGCCGAGAAGGGATTCGTGGTCGCGAAGTTGTTGACGCAAAACGATACCGGTTATCACCAGCTCGACGCCCAGCTCAAG GAGATGATCAAAACCGAACTGGTTCGTGAAAAACAGGGCGCGGCGCTGAAATCGAAGCTTGTCGCTTTGTCGAAAAGCTC CGGCGGCTCGCTCGACGCCATCGCCGCAAAGGACCCGTCTCTGCGTAAAATCACCTCGAAGGAGATTCGCTGGCGCGACG GCTACATCGACGGGTACGGCGTCGATCCCCAGCTCGTGGAGGGAATGGCGGGCATGAAGCTCAACACGCTTTCGCAGCCG GTACAGACCAGCGGAGGATATGCGCTCGTGCAACTGACCAGCCGCCAGCTTGCACCGGGCACCGATCTTGCCGCCGAGAA ACAGAAGGTTTTGCCGCAACTGATGCAGGCCAGGCAGCAGCAGTTCCTTTCCGAGTATCTGCAATCGTATCGCCGGAACG CCAAAATCGAGGATTTCAGGTAG
Upstream 100 bases:
>100_bases AGCATGAGATTTTTCACAACTTCGCCTTCGTGCCGCTCTGCGGGCGTGAAGGTTGGGCAGACAACAACGAATAAACAGTC AAAGACAGAAAAGAGAAGTT
Downstream 100 bases:
>100_bases CGCCATTCAGGCAGACCCGATGCCGGAACAGCAAAAAGCCGCCCGGATAATTCCGAGGCGGCTTTTTTGTTATCGAGCTC TTACGGTCTTGCGTGTGATA
Product: peptidyl-prolyl cis-trans isomerase, PpiC-type
Products: NA
Alternate protein names: Peptidyl-prolyl cis-trans isomerase surA; PPIase surA; Rotamase surA [H]
Number of amino acids: Translated: 700; Mature: 699
Protein sequence:
>700_residues MALMSKLRDKTHIVLFVLVAAFLALIVFEWGMNFTGPTRKAGVAGKVNGESISMNEYEALYNNIVAGFRQSNPGVEITSG LDAKFREQAWNYVVDQTLLAQLLKKYGITVTDQEVLDAVNNPVNPPAIIRQNFTDPRTGKIDRQLLEQARSDPKAKDFWL NAQEAIKRELMVNKLVMTLRTMVFVTDPELTEVVQRQFTTFAGSFIPFPYSYAGAETNFPVKDDEIKAWYDSHKEQFREE PVRSAEFVFFPLTPSRQDSLQVKKEIDGLIPQFAAAKSDSEFVKIQSDLPNSANVTLSRADFSPAAGQALFSSPKLVPGQ IVGPIADEGYYRLLKIKSVTTGEPVASASHILIRLNPADKAEAARAMGLLKKISEELKGGASFASLAAKYSEDPGSARNG GFVGWFTKDRMVPQFAQAVFAGKPGQIVGPVQTQFGLHIIKIEGFDNRRIVCSEVARQIKASTQTSETIKRQAQAFLTEA KSKGFEAAAKAQRLEVGKTGDFTRQSLLAVPGMGEAITGFAFKAKDSDISDVLDAEKGFVVAKLLTQNDTGYHQLDAQLK EMIKTELVREKQGAALKSKLVALSKSSGGSLDAIAAKDPSLRKITSKEIRWRDGYIDGYGVDPQLVEGMAGMKLNTLSQP VQTSGGYALVQLTSRQLAPGTDLAAEKQKVLPQLMQARQQQFLSEYLQSYRRNAKIEDFR
Sequences:
>Translated_700_residues MALMSKLRDKTHIVLFVLVAAFLALIVFEWGMNFTGPTRKAGVAGKVNGESISMNEYEALYNNIVAGFRQSNPGVEITSG LDAKFREQAWNYVVDQTLLAQLLKKYGITVTDQEVLDAVNNPVNPPAIIRQNFTDPRTGKIDRQLLEQARSDPKAKDFWL NAQEAIKRELMVNKLVMTLRTMVFVTDPELTEVVQRQFTTFAGSFIPFPYSYAGAETNFPVKDDEIKAWYDSHKEQFREE PVRSAEFVFFPLTPSRQDSLQVKKEIDGLIPQFAAAKSDSEFVKIQSDLPNSANVTLSRADFSPAAGQALFSSPKLVPGQ IVGPIADEGYYRLLKIKSVTTGEPVASASHILIRLNPADKAEAARAMGLLKKISEELKGGASFASLAAKYSEDPGSARNG GFVGWFTKDRMVPQFAQAVFAGKPGQIVGPVQTQFGLHIIKIEGFDNRRIVCSEVARQIKASTQTSETIKRQAQAFLTEA KSKGFEAAAKAQRLEVGKTGDFTRQSLLAVPGMGEAITGFAFKAKDSDISDVLDAEKGFVVAKLLTQNDTGYHQLDAQLK EMIKTELVREKQGAALKSKLVALSKSSGGSLDAIAAKDPSLRKITSKEIRWRDGYIDGYGVDPQLVEGMAGMKLNTLSQP VQTSGGYALVQLTSRQLAPGTDLAAEKQKVLPQLMQARQQQFLSEYLQSYRRNAKIEDFR >Mature_699_residues ALMSKLRDKTHIVLFVLVAAFLALIVFEWGMNFTGPTRKAGVAGKVNGESISMNEYEALYNNIVAGFRQSNPGVEITSGL DAKFREQAWNYVVDQTLLAQLLKKYGITVTDQEVLDAVNNPVNPPAIIRQNFTDPRTGKIDRQLLEQARSDPKAKDFWLN AQEAIKRELMVNKLVMTLRTMVFVTDPELTEVVQRQFTTFAGSFIPFPYSYAGAETNFPVKDDEIKAWYDSHKEQFREEP VRSAEFVFFPLTPSRQDSLQVKKEIDGLIPQFAAAKSDSEFVKIQSDLPNSANVTLSRADFSPAAGQALFSSPKLVPGQI VGPIADEGYYRLLKIKSVTTGEPVASASHILIRLNPADKAEAARAMGLLKKISEELKGGASFASLAAKYSEDPGSARNGG FVGWFTKDRMVPQFAQAVFAGKPGQIVGPVQTQFGLHIIKIEGFDNRRIVCSEVARQIKASTQTSETIKRQAQAFLTEAK SKGFEAAAKAQRLEVGKTGDFTRQSLLAVPGMGEAITGFAFKAKDSDISDVLDAEKGFVVAKLLTQNDTGYHQLDAQLKE MIKTELVREKQGAALKSKLVALSKSSGGSLDAIAAKDPSLRKITSKEIRWRDGYIDGYGVDPQLVEGMAGMKLNTLSQPV QTSGGYALVQLTSRQLAPGTDLAAEKQKVLPQLMQARQQQFLSEYLQSYRRNAKIEDFR
Specific function: Chaperone involved in the correct folding and assembly of outer membrane proteins. It recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Periplasm. Note=Is capable of associating with the outer membrane (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PpiC domains [H]
Homologues:
Organism=Escherichia coli, GI1786238, Length=163, Percent_Identity=34.3558282208589, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1790211, Length=97, Percent_Identity=41.2371134020619, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: 400 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000297 - InterPro: IPR023058 - InterPro: IPR023034 - InterPro: IPR015391 - InterPro: IPR008880 [H]
Pfam domain/function: PF00639 Rotamase; PF09312 SurA_N [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 77050; Mature: 76919
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: PS01096 PPIC_PPIASE_1 ; PS50198 PPIC_PPIASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALMSKLRDKTHIVLFVLVAAFLALIVFEWGMNFTGPTRKAGVAGKVNGESISMNEYEAL CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECHHHHHHH YNNIVAGFRQSNPGVEITSGLDAKFREQAWNYVVDQTLLAQLLKKYGITVTDQEVLDAVN HHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHC NPVNPPAIIRQNFTDPRTGKIDRQLLEQARSDPKAKDFWLNAQEAIKRELMVNKLVMTLR CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHH TMVFVTDPELTEVVQRQFTTFAGSFIPFPYSYAGAETNFPVKDDEIKAWYDSHKEQFREE HHHEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC PVRSAEFVFFPLTPSRQDSLQVKKEIDGLIPQFAAAKSDSEFVKIQSDLPNSANVTLSRA CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEC DFSPAAGQALFSSPKLVPGQIVGPIADEGYYRLLKIKSVTTGEPVASASHILIRLNPADK CCCCHHCHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCH AEAARAMGLLKKISEELKGGASFASLAAKYSEDPGSARNGGFVGWFTKDRMVPQFAQAVF HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHH AGKPGQIVGPVQTQFGLHIIKIEGFDNRRIVCSEVARQIKASTQTSETIKRQAQAFLTEA CCCCCCEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH KSKGFEAAAKAQRLEVGKTGDFTRQSLLAVPGMGEAITGFAFKAKDSDISDVLDAEKGFV HHCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHCCEEECCCCCHHHHHHCCCCEE VAKLLTQNDTGYHQLDAQLKEMIKTELVREKQGAALKSKLVALSKSSGGSLDAIAAKDPS EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEECCCCC LRKITSKEIRWRDGYIDGYGVDPQLVEGMAGMKLNTLSQPVQTSGGYALVQLTSRQLAPG HHHHHHHHCEECCCCCCCCCCCHHHHHCCCCCEEHHHCCCHHCCCCEEEEEEECCCCCCC TDLAAEKQKVLPQLMQARQQQFLSEYLQSYRRNAKIEDFR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ALMSKLRDKTHIVLFVLVAAFLALIVFEWGMNFTGPTRKAGVAGKVNGESISMNEYEAL CHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECHHHHHHH YNNIVAGFRQSNPGVEITSGLDAKFREQAWNYVVDQTLLAQLLKKYGITVTDQEVLDAVN HHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHC NPVNPPAIIRQNFTDPRTGKIDRQLLEQARSDPKAKDFWLNAQEAIKRELMVNKLVMTLR CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHH TMVFVTDPELTEVVQRQFTTFAGSFIPFPYSYAGAETNFPVKDDEIKAWYDSHKEQFREE HHHEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC PVRSAEFVFFPLTPSRQDSLQVKKEIDGLIPQFAAAKSDSEFVKIQSDLPNSANVTLSRA CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEC DFSPAAGQALFSSPKLVPGQIVGPIADEGYYRLLKIKSVTTGEPVASASHILIRLNPADK CCCCHHCHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCH AEAARAMGLLKKISEELKGGASFASLAAKYSEDPGSARNGGFVGWFTKDRMVPQFAQAVF HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHH AGKPGQIVGPVQTQFGLHIIKIEGFDNRRIVCSEVARQIKASTQTSETIKRQAQAFLTEA CCCCCCEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH KSKGFEAAAKAQRLEVGKTGDFTRQSLLAVPGMGEAITGFAFKAKDSDISDVLDAEKGFV HHCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHCCEEECCCCCHHHHHHCCCCEE VAKLLTQNDTGYHQLDAQLKEMIKTELVREKQGAALKSKLVALSKSSGGSLDAIAAKDPS EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEECCCCC LRKITSKEIRWRDGYIDGYGVDPQLVEGMAGMKLNTLSQPVQTSGGYALVQLTSRQLAPG HHHHHHHHCEECCCCCCCCCCCHHHHHCCCCCEEHHHCCCHHCCCCEEEEEEECCCCCCC TDLAAEKQKVLPQLMQARQQQFLSEYLQSYRRNAKIEDFR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA