| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is yeeZ [H]
Identifier: 21673030
GI number: 21673030
Start: 197951
End: 198664
Strand: Direct
Name: yeeZ [H]
Synonym: CT0189
Alternate gene names: 21673030
Gene position: 197951-198664 (Clockwise)
Preceding gene: 21673029
Following gene: 21673032
Centisome position: 9.19
GC content: 57.42
Gene sequence:
>714_bases ATGAAAGAGGCCGGTGTCGAGCCTTTCCGGATTGTCATCGATGAGAGCATTGAAGGCGATATTTCCTCGTTTTTGGACAG CGAAATCCTCGTGGTGAACATTCCTCCCAAGCGGCGTGAAGATGTGGTCGAATACCATGTCGGCCAGATTTCGCTGCTGA TCGACGCTCTTGCCGATTCGCCGGTGAAGCATGTGTTGTTCGTCAGCTCGACCTCGGTCTATCCCGCGTCGGGTGGTGAA GTGGTCGAATCTGACGCCGCAGATCCCGACGCGGCGGACTCTCCAGCCGGTCGGGCGTTGATGTACGTCGAGGAGATGCT GCGTTCGGAGTCTGCGTTCAACACCACGGTGGTGCGCTTCGGTGGTCTGATCGGCCCCGGACGCAATCCGGCGGAGTTCA TCCAGCGCATGACAGAAATCACGAGTCCCGCTCATCCGGTGAACCTTATTCATCTCGATGATTGTGTGCACGTGATCGCT GAAATCATCCGGCAGGAAGCCTGGGGCGAAACCTTCAACGCCTGCGCGCCGCTCCACCCGACTCGAAGCGAACTCTATGC CGCCGCTGCTGAAAGTCACGGCCTCGCCGCGCTGCAGGAAGAACGATCCAGTGACACCAATTTCAAGATCGTCAACAGTG ACAGGATTGTCGAGAAACTGGGATACACGTTCCTGCATCCTGATCCGCTGGCAATGGCAAGGGGAGGCAATTGA
Upstream 100 bases:
>100_bases TCTCGGTTGCGGGTGGCTCGGTTTGCCACTGGCCCGTTTTCTGGCTGGCGAGGGGTATACCGTCAAGGGTTCGACTACCA GCGAAGCGAAAATTACCAAG
Downstream 100 bases:
>100_bases CAGTTGCATTGTCGGGGCAGACCTTTGTGTCTGCCCTGTTCCGCAGTTGCCAGGCCGTTGCAGTTACAGAATGAATTCGA GGTCGTAGCCCTCTTTCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MKEAGVEPFRIVIDESIEGDISSFLDSEILVVNIPPKRREDVVEYHVGQISLLIDALADSPVKHVLFVSSTSVYPASGGE VVESDAADPDAADSPAGRALMYVEEMLRSESAFNTTVVRFGGLIGPGRNPAEFIQRMTEITSPAHPVNLIHLDDCVHVIA EIIRQEAWGETFNACAPLHPTRSELYAAAAESHGLAALQEERSSDTNFKIVNSDRIVEKLGYTFLHPDPLAMARGGN
Sequences:
>Translated_237_residues MKEAGVEPFRIVIDESIEGDISSFLDSEILVVNIPPKRREDVVEYHVGQISLLIDALADSPVKHVLFVSSTSVYPASGGE VVESDAADPDAADSPAGRALMYVEEMLRSESAFNTTVVRFGGLIGPGRNPAEFIQRMTEITSPAHPVNLIHLDDCVHVIA EIIRQEAWGETFNACAPLHPTRSELYAAAAESHGLAALQEERSSDTNFKIVNSDRIVEKLGYTFLHPDPLAMARGGN >Mature_237_residues MKEAGVEPFRIVIDESIEGDISSFLDSEILVVNIPPKRREDVVEYHVGQISLLIDALADSPVKHVLFVSSTSVYPASGGE VVESDAADPDAADSPAGRALMYVEEMLRSESAFNTTVVRFGGLIGPGRNPAEFIQRMTEITSPAHPVNLIHLDDCVHVIA EIIRQEAWGETFNACAPLHPTRSELYAAAAESHGLAALQEERSSDTNFKIVNSDRIVEKLGYTFLHPDPLAMARGGN
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788327, Length=203, Percent_Identity=32.512315270936, Blast_Score=116, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001509 - InterPro: IPR016040 [H]
Pfam domain/function: PF01370 Epimerase [H]
EC number: NA
Molecular weight: Translated: 25751; Mature: 25751
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEAGVEPFRIVIDESIEGDISSFLDSEILVVNIPPKRREDVVEYHVGQISLLIDALADS CCCCCCCCEEEEECCCCCHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCC PVKHVLFVSSTSVYPASGGEVVESDAADPDAADSPAGRALMYVEEMLRSESAFNTTVVRF CCCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH GGLIGPGRNPAEFIQRMTEITSPAHPVNLIHLDDCVHVIAEIIRQEAWGETFNACAPLHP CCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHCCCCCCC TRSELYAAAAESHGLAALQEERSSDTNFKIVNSDRIVEKLGYTFLHPDPLAMARGGN CHHHHHHHHHHCCCHHHHHHHCCCCCCEEEECCHHHHHHHCCEEECCCCCCCCCCCC >Mature Secondary Structure MKEAGVEPFRIVIDESIEGDISSFLDSEILVVNIPPKRREDVVEYHVGQISLLIDALADS CCCCCCCCEEEEECCCCCHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCC PVKHVLFVSSTSVYPASGGEVVESDAADPDAADSPAGRALMYVEEMLRSESAFNTTVVRF CCCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH GGLIGPGRNPAEFIQRMTEITSPAHPVNLIHLDDCVHVIAEIIRQEAWGETFNACAPLHP CCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHCCCCCCC TRSELYAAAAESHGLAALQEERSSDTNFKIVNSDRIVEKLGYTFLHPDPLAMARGGN CHHHHHHHHHHCCCHHHHHHHCCCCCCEEEECCHHHHHHHCCEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]