Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is yeeZ [H]

Identifier: 21673030

GI number: 21673030

Start: 197951

End: 198664

Strand: Direct

Name: yeeZ [H]

Synonym: CT0189

Alternate gene names: 21673030

Gene position: 197951-198664 (Clockwise)

Preceding gene: 21673029

Following gene: 21673032

Centisome position: 9.19

GC content: 57.42

Gene sequence:

>714_bases
ATGAAAGAGGCCGGTGTCGAGCCTTTCCGGATTGTCATCGATGAGAGCATTGAAGGCGATATTTCCTCGTTTTTGGACAG
CGAAATCCTCGTGGTGAACATTCCTCCCAAGCGGCGTGAAGATGTGGTCGAATACCATGTCGGCCAGATTTCGCTGCTGA
TCGACGCTCTTGCCGATTCGCCGGTGAAGCATGTGTTGTTCGTCAGCTCGACCTCGGTCTATCCCGCGTCGGGTGGTGAA
GTGGTCGAATCTGACGCCGCAGATCCCGACGCGGCGGACTCTCCAGCCGGTCGGGCGTTGATGTACGTCGAGGAGATGCT
GCGTTCGGAGTCTGCGTTCAACACCACGGTGGTGCGCTTCGGTGGTCTGATCGGCCCCGGACGCAATCCGGCGGAGTTCA
TCCAGCGCATGACAGAAATCACGAGTCCCGCTCATCCGGTGAACCTTATTCATCTCGATGATTGTGTGCACGTGATCGCT
GAAATCATCCGGCAGGAAGCCTGGGGCGAAACCTTCAACGCCTGCGCGCCGCTCCACCCGACTCGAAGCGAACTCTATGC
CGCCGCTGCTGAAAGTCACGGCCTCGCCGCGCTGCAGGAAGAACGATCCAGTGACACCAATTTCAAGATCGTCAACAGTG
ACAGGATTGTCGAGAAACTGGGATACACGTTCCTGCATCCTGATCCGCTGGCAATGGCAAGGGGAGGCAATTGA

Upstream 100 bases:

>100_bases
TCTCGGTTGCGGGTGGCTCGGTTTGCCACTGGCCCGTTTTCTGGCTGGCGAGGGGTATACCGTCAAGGGTTCGACTACCA
GCGAAGCGAAAATTACCAAG

Downstream 100 bases:

>100_bases
CAGTTGCATTGTCGGGGCAGACCTTTGTGTCTGCCCTGTTCCGCAGTTGCCAGGCCGTTGCAGTTACAGAATGAATTCGA
GGTCGTAGCCCTCTTTCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MKEAGVEPFRIVIDESIEGDISSFLDSEILVVNIPPKRREDVVEYHVGQISLLIDALADSPVKHVLFVSSTSVYPASGGE
VVESDAADPDAADSPAGRALMYVEEMLRSESAFNTTVVRFGGLIGPGRNPAEFIQRMTEITSPAHPVNLIHLDDCVHVIA
EIIRQEAWGETFNACAPLHPTRSELYAAAAESHGLAALQEERSSDTNFKIVNSDRIVEKLGYTFLHPDPLAMARGGN

Sequences:

>Translated_237_residues
MKEAGVEPFRIVIDESIEGDISSFLDSEILVVNIPPKRREDVVEYHVGQISLLIDALADSPVKHVLFVSSTSVYPASGGE
VVESDAADPDAADSPAGRALMYVEEMLRSESAFNTTVVRFGGLIGPGRNPAEFIQRMTEITSPAHPVNLIHLDDCVHVIA
EIIRQEAWGETFNACAPLHPTRSELYAAAAESHGLAALQEERSSDTNFKIVNSDRIVEKLGYTFLHPDPLAMARGGN
>Mature_237_residues
MKEAGVEPFRIVIDESIEGDISSFLDSEILVVNIPPKRREDVVEYHVGQISLLIDALADSPVKHVLFVSSTSVYPASGGE
VVESDAADPDAADSPAGRALMYVEEMLRSESAFNTTVVRFGGLIGPGRNPAEFIQRMTEITSPAHPVNLIHLDDCVHVIA
EIIRQEAWGETFNACAPLHPTRSELYAAAAESHGLAALQEERSSDTNFKIVNSDRIVEKLGYTFLHPDPLAMARGGN

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788327, Length=203, Percent_Identity=32.512315270936, Blast_Score=116, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 25751; Mature: 25751

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEAGVEPFRIVIDESIEGDISSFLDSEILVVNIPPKRREDVVEYHVGQISLLIDALADS
CCCCCCCCEEEEECCCCCHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCC
PVKHVLFVSSTSVYPASGGEVVESDAADPDAADSPAGRALMYVEEMLRSESAFNTTVVRF
CCCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
GGLIGPGRNPAEFIQRMTEITSPAHPVNLIHLDDCVHVIAEIIRQEAWGETFNACAPLHP
CCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHCCCCCCC
TRSELYAAAAESHGLAALQEERSSDTNFKIVNSDRIVEKLGYTFLHPDPLAMARGGN
CHHHHHHHHHHCCCHHHHHHHCCCCCCEEEECCHHHHHHHCCEEECCCCCCCCCCCC
>Mature Secondary Structure
MKEAGVEPFRIVIDESIEGDISSFLDSEILVVNIPPKRREDVVEYHVGQISLLIDALADS
CCCCCCCCEEEEECCCCCHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCC
PVKHVLFVSSTSVYPASGGEVVESDAADPDAADSPAGRALMYVEEMLRSESAFNTTVVRF
CCCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
GGLIGPGRNPAEFIQRMTEITSPAHPVNLIHLDDCVHVIAEIIRQEAWGETFNACAPLHP
CCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHCCCCCCC
TRSELYAAAAESHGLAALQEERSSDTNFKIVNSDRIVEKLGYTFLHPDPLAMARGGN
CHHHHHHHHHHCCCHHHHHHHCCCCCCEEEECCHHHHHHHCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]