| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is glpK [H]
Identifier: 21673026
GI number: 21673026
Start: 194745
End: 196196
Strand: Direct
Name: glpK [H]
Synonym: CT0185
Alternate gene names: 21673026
Gene position: 194745-196196 (Clockwise)
Preceding gene: 21673023
Following gene: 21673027
Centisome position: 9.04
GC content: 65.7
Gene sequence:
>1452_bases ATGGCTATTCTTTCCATCGATCAGGGCACGACCGGCACCACCTGCATGATCTACGACCGGACGGGCAGCGTGCTCGCCCG CGCGTATCGCGAGTTGACGCAACACTATCCGCAGGCGGGGTGGGTGGAGCATGATCCGGAGGAGATCTGGCGGACGGTGG TCGAGTGCGTGGCCGAGGTGCGGGGCGCATATTCGGGTCACATCGAAGCTATCGGCATCACCAACCAGCGCGAGACCACC GTGGTGTGGGATCGGCGGAGCGGCCAGCCCGTGCACCGCGCCATCGTCTGGCAGTGCCGGCGGACGGCCAAATTGTGCAA CCGCTACCGCAGCGAGGAGGCGGCGATCCGCGCGAAGACAGGACTGCCGGTGGACGCCTACTTCAGCGCCACCAAGATTC GCTGGATTCTCGACGCGCATCCCGAAATCGATCCATCAAATCTCCTCTTCGGCACCATTGACACGTGGCTCATCTGGAAG CTGACCGGCGGCGAGGTTCACGCGACCGACCTGACGAATGCTTCGCGCACGCTGTTGTTTGATATCCACGAGCGGCGCTG GTCGCCCGAGCTTTGCGAGTTGTTTGGCGTGCCGCTCTCAATGCTACCGGAGGCGCGTCCGTCGATGGGCGGGTTCGGCT CGGTGCGCACGATTCCGGCGCTCGATGGCGTGCTGATTGCGGGCGTGGCGGGCGACCAGCAGGCGGCGCTTTTTGGCCAG TGCTGCTTTGCGCCGGGGTCGGTCAAGAACACCTACGGCACCGGCTGCTTCATGGTGATGAACACCGGAGAAAAGTTTGT GAGTTCGAGTCACGGCTTGTTGACGACGCTCGCGCTCGACGGCGCTGGCCGGAGCTGCTACGCGGTCGAGGGGTCGGTGT TCATCGGCGGCGCGGTGATGCAGTGGCTGCGCGACGGCTTGCAGCTCATCGGCAGCGCCGCCGAGTCTGAGACGATTGCC CGCTCGGTTGAATCGAATGGAGGGGTCTATCTCGTGCCCGCCTTCGTCGGTCTCGGCGCACCGCACTGGAACATGGAGGC GCGGGGCACGATCACCGGCCTGACGCGCGGCTCGTCGCGGGCGCATATTGTCCGCGCGGCGCTGGAGTCGATCGCCTTCC AGTCGCACGACGTGTTTCGTGCGATGGTGGCCGACATCGGCATTCAGCCGCAGTCGCTCACGGTCGATGGCGGCGCGGTG AGCAACGAGTTTCTGATGCAGCTCCAGGCCGACCTGCTCGGCGTGCCGGTGCACCGTCCGCGCAACATCGAATCCACTGC CCTCGGCGCGGCCTGCCTTGCGGGTCTCGAAGCCGGAGTGTGGGGTTCCGCCGCCGAACTGCGTGTGCTCAACAGCGTCG AGCGGGTCTTCACTCCCGCGATGCCGGAGGGCGAACGCGAGGCGTTGCTGGCGGGCTGGCAAAAGGCGCTGCGGCAGACG CTCACATCATAA
Upstream 100 bases:
>100_bases CAACGCGTTGCGCAACTCTCGAATCGTCCGCAGATCGGATTTTTCAGGTGAATCGGTATCTTGCTTTTAGCTGCACGTTG AACCTTTCCTCGCAAATCCT
Downstream 100 bases:
>100_bases ACCATTCATCAAAAAGAAGATGACACACAATGATCATCCCGGCGAAGGCACGCCGAAAACCGTCGTTTGCCCCATGTGCG GCGAGCCATTCACCTGCGGC
Product: glycerol kinase
Products: NA
Alternate protein names: ATP:glycerol 3-phosphotransferase; Glycerokinase; GK [H]
Number of amino acids: Translated: 483; Mature: 482
Protein sequence:
>483_residues MAILSIDQGTTGTTCMIYDRTGSVLARAYRELTQHYPQAGWVEHDPEEIWRTVVECVAEVRGAYSGHIEAIGITNQRETT VVWDRRSGQPVHRAIVWQCRRTAKLCNRYRSEEAAIRAKTGLPVDAYFSATKIRWILDAHPEIDPSNLLFGTIDTWLIWK LTGGEVHATDLTNASRTLLFDIHERRWSPELCELFGVPLSMLPEARPSMGGFGSVRTIPALDGVLIAGVAGDQQAALFGQ CCFAPGSVKNTYGTGCFMVMNTGEKFVSSSHGLLTTLALDGAGRSCYAVEGSVFIGGAVMQWLRDGLQLIGSAAESETIA RSVESNGGVYLVPAFVGLGAPHWNMEARGTITGLTRGSSRAHIVRAALESIAFQSHDVFRAMVADIGIQPQSLTVDGGAV SNEFLMQLQADLLGVPVHRPRNIESTALGAACLAGLEAGVWGSAAELRVLNSVERVFTPAMPEGEREALLAGWQKALRQT LTS
Sequences:
>Translated_483_residues MAILSIDQGTTGTTCMIYDRTGSVLARAYRELTQHYPQAGWVEHDPEEIWRTVVECVAEVRGAYSGHIEAIGITNQRETT VVWDRRSGQPVHRAIVWQCRRTAKLCNRYRSEEAAIRAKTGLPVDAYFSATKIRWILDAHPEIDPSNLLFGTIDTWLIWK LTGGEVHATDLTNASRTLLFDIHERRWSPELCELFGVPLSMLPEARPSMGGFGSVRTIPALDGVLIAGVAGDQQAALFGQ CCFAPGSVKNTYGTGCFMVMNTGEKFVSSSHGLLTTLALDGAGRSCYAVEGSVFIGGAVMQWLRDGLQLIGSAAESETIA RSVESNGGVYLVPAFVGLGAPHWNMEARGTITGLTRGSSRAHIVRAALESIAFQSHDVFRAMVADIGIQPQSLTVDGGAV SNEFLMQLQADLLGVPVHRPRNIESTALGAACLAGLEAGVWGSAAELRVLNSVERVFTPAMPEGEREALLAGWQKALRQT LTS >Mature_482_residues AILSIDQGTTGTTCMIYDRTGSVLARAYRELTQHYPQAGWVEHDPEEIWRTVVECVAEVRGAYSGHIEAIGITNQRETTV VWDRRSGQPVHRAIVWQCRRTAKLCNRYRSEEAAIRAKTGLPVDAYFSATKIRWILDAHPEIDPSNLLFGTIDTWLIWKL TGGEVHATDLTNASRTLLFDIHERRWSPELCELFGVPLSMLPEARPSMGGFGSVRTIPALDGVLIAGVAGDQQAALFGQC CFAPGSVKNTYGTGCFMVMNTGEKFVSSSHGLLTTLALDGAGRSCYAVEGSVFIGGAVMQWLRDGLQLIGSAAESETIAR SVESNGGVYLVPAFVGLGAPHWNMEARGTITGLTRGSSRAHIVRAALESIAFQSHDVFRAMVADIGIQPQSLTVDGGAVS NEFLMQLQADLLGVPVHRPRNIESTALGAACLAGLEAGVWGSAAELRVLNSVERVFTPAMPEGEREALLAGWQKALRQTL TS
Specific function: Key enzyme in the regulation of glycerol uptake and metabolism [H]
COG id: COG0554
COG function: function code C; Glycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGGY kinase family [H]
Homologues:
Organism=Homo sapiens, GI189409120, Length=500, Percent_Identity=45.4, Blast_Score=414, Evalue=1e-115, Organism=Homo sapiens, GI4504007, Length=500, Percent_Identity=45.4, Blast_Score=413, Evalue=1e-115, Organism=Homo sapiens, GI42794763, Length=505, Percent_Identity=44.950495049505, Blast_Score=412, Evalue=1e-115, Organism=Homo sapiens, GI41393575, Length=499, Percent_Identity=43.687374749499, Blast_Score=405, Evalue=1e-113, Organism=Homo sapiens, GI88196792, Length=505, Percent_Identity=34.2574257425743, Blast_Score=306, Evalue=4e-83, Organism=Escherichia coli, GI1790361, Length=496, Percent_Identity=51.8145161290323, Blast_Score=508, Evalue=1e-145, Organism=Escherichia coli, GI1789987, Length=497, Percent_Identity=26.3581488933602, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1789168, Length=482, Percent_Identity=23.6514522821577, Blast_Score=96, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17535599, Length=496, Percent_Identity=41.7338709677419, Blast_Score=384, Evalue=1e-107, Organism=Caenorhabditis elegans, GI71986140, Length=521, Percent_Identity=26.295585412668, Blast_Score=172, Evalue=5e-43, Organism=Caenorhabditis elegans, GI71986147, Length=300, Percent_Identity=31, Blast_Score=131, Evalue=9e-31, Organism=Saccharomyces cerevisiae, GI6321755, Length=516, Percent_Identity=35.6589147286822, Blast_Score=288, Evalue=2e-78, Organism=Drosophila melanogaster, GI24655555, Length=496, Percent_Identity=39.9193548387097, Blast_Score=358, Evalue=6e-99, Organism=Drosophila melanogaster, GI24655560, Length=496, Percent_Identity=39.9193548387097, Blast_Score=358, Evalue=6e-99, Organism=Drosophila melanogaster, GI24655570, Length=496, Percent_Identity=39.9193548387097, Blast_Score=358, Evalue=6e-99, Organism=Drosophila melanogaster, GI24655574, Length=496, Percent_Identity=39.9193548387097, Blast_Score=358, Evalue=6e-99, Organism=Drosophila melanogaster, GI24655565, Length=496, Percent_Identity=39.9193548387097, Blast_Score=358, Evalue=6e-99, Organism=Drosophila melanogaster, GI17864214, Length=503, Percent_Identity=41.5506958250497, Blast_Score=357, Evalue=1e-98, Organism=Drosophila melanogaster, GI24654573, Length=459, Percent_Identity=43.1372549019608, Blast_Score=337, Evalue=1e-92, Organism=Drosophila melanogaster, GI19922058, Length=528, Percent_Identity=34.469696969697, Blast_Score=291, Evalue=7e-79, Organism=Drosophila melanogaster, GI24652871, Length=494, Percent_Identity=34.2105263157895, Blast_Score=276, Evalue=2e-74, Organism=Drosophila melanogaster, GI24656367, Length=489, Percent_Identity=30.2658486707566, Blast_Score=207, Evalue=2e-53, Organism=Drosophila melanogaster, GI21357867, Length=508, Percent_Identity=29.9212598425197, Blast_Score=203, Evalue=3e-52, Organism=Drosophila melanogaster, GI24656372, Length=330, Percent_Identity=33.030303030303, Blast_Score=166, Evalue=3e-41, Organism=Drosophila melanogaster, GI45552909, Length=285, Percent_Identity=29.8245614035088, Blast_Score=117, Evalue=1e-26,
Paralogues:
None
Copy number: 2,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000577 - InterPro: IPR018485 - InterPro: IPR018483 - InterPro: IPR018484 - InterPro: IPR005999 [H]
Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]
EC number: =2.7.1.30 [H]
Molecular weight: Translated: 52227; Mature: 52096
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00445 FGGY_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAILSIDQGTTGTTCMIYDRTGSVLARAYRELTQHYPQAGWVEHDPEEIWRTVVECVAEV CEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH RGAYSGHIEAIGITNQRETTVVWDRRSGQPVHRAIVWQCRRTAKLCNRYRSEEAAIRAKT HCCCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHEEECC GLPVDAYFSATKIRWILDAHPEIDPSNLLFGTIDTWLIWKLTGGEVHATDLTNASRTLLF CCCCHHEECCEEEEEEEECCCCCCCCCEEEEECCEEEEEEEECCEEEEEECCCCCCEEEE DIHERRWSPELCELFGVPLSMLPEARPSMGGFGSVRTIPALDGVLIAGVAGDQQAALFGQ EEHHHCCCHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHH CCFAPGSVKNTYGTGCFMVMNTGEKFVSSSHGLLTTLALDGAGRSCYAVEGSVFIGGAVM HHCCCCCCCCCCCCEEEEEEECCHHHHCCCCCEEEEEEECCCCCEEEEECCCEEECHHHH QWLRDGLQLIGSAAESETIARSVESNGGVYLVPAFVGLGAPHWNMEARGTITGLTRGSSR HHHHHHHHHHHCHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCCCCCCCEEEEECCCCCH AHIVRAALESIAFQSHDVFRAMVADIGIQPQSLTVDGGAVSNEFLMQLQADLLGVPVHRP HHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCC RNIESTALGAACLAGLEAGVWGSAAELRVLNSVERVFTPAMPEGEREALLAGWQKALRQT CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH LTS HCC >Mature Secondary Structure AILSIDQGTTGTTCMIYDRTGSVLARAYRELTQHYPQAGWVEHDPEEIWRTVVECVAEV EEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH RGAYSGHIEAIGITNQRETTVVWDRRSGQPVHRAIVWQCRRTAKLCNRYRSEEAAIRAKT HCCCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHEEECC GLPVDAYFSATKIRWILDAHPEIDPSNLLFGTIDTWLIWKLTGGEVHATDLTNASRTLLF CCCCHHEECCEEEEEEEECCCCCCCCCEEEEECCEEEEEEEECCEEEEEECCCCCCEEEE DIHERRWSPELCELFGVPLSMLPEARPSMGGFGSVRTIPALDGVLIAGVAGDQQAALFGQ EEHHHCCCHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHH CCFAPGSVKNTYGTGCFMVMNTGEKFVSSSHGLLTTLALDGAGRSCYAVEGSVFIGGAVM HHCCCCCCCCCCCCEEEEEEECCHHHHCCCCCEEEEEEECCCCCEEEEECCCEEECHHHH QWLRDGLQLIGSAAESETIARSVESNGGVYLVPAFVGLGAPHWNMEARGTITGLTRGSSR HHHHHHHHHHHCHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCCCCCCCEEEEECCCCCH AHIVRAALESIAFQSHDVFRAMVADIGIQPQSLTVDGGAVSNEFLMQLQADLLGVPVHRP HHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCC RNIESTALGAACLAGLEAGVWGSAAELRVLNSVERVFTPAMPEGEREALLAGWQKALRQT CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH LTS HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA