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The map label for this gene is pyrF [H]

Identifier: 21672970

GI number: 21672970

Start: 123440

End: 124264

Strand: Direct

Name: pyrF [H]

Synonym: CT0129

Alternate gene names: 21672970

Gene position: 123440-124264 (Clockwise)

Preceding gene: 21672969

Following gene: 21672971

Centisome position: 5.73

GC content: 58.79

Gene sequence:

>825_bases
ATGAGTTCAGCAAGAGATAAGGCGAACCGCCGGATAGCTTCGCTCCAGTCGATGCTTTGTGTCGGGCTCGACAGTGATCC
TTCGAAGATCCCCACGCTCTTCCATTCGATGGAGCGCCCGGTGCTTGAGTTCAACCGGGCGATTATCCGCGCGACTGGCG
AGCACGCGGCAGCCTATAAAGTCAATACAGCATTCTACGAATCGCGGGGGCTTGCCGGAATGCGCGATCTTGACGATACA
CTCCAAGCGCTTCCGCCGGAGTGTCTGAGCATCGCGGACGCCAAGCGGGCCGACATCGGAAACACCAGCCGGCACTACGC
AAAGGCATTTTTCGAGACATGGCCGTTCGATGCCATCACGGTGGCGCCTTACATGGGGTTCGATTCGCTCGAACCGTTTT
TCGAGTATGACGACAAACTTGTCTTTGTCTTGTGCCTCACCTCGAATCCTGGCTCTGCTGATTTCGAAGAGCGCATTCTC
GACGATGGCCGTCCGCTCTACCGCGCCGTGCTCGACAGGGTTCGGAGCTGGCAGCGCAACGGAAATGCCGGAATCGTCGT
CGGCGCAACCAAGGCCAGCTTGCTGCAAGAGCTTCGGCAGGAAGCGCCGGAGCTGTTTTTCCTGATTCCCGGTGTCGGTG
CGCAGGGCGGGTCGATGCAGGAAGCTGTCAATCAGGGTGCCGATCCGGATCGCGGTGGCGCGGTGGTCAACGTGAGCCGG
GCGCTCATTTTTCCGAAGGGCGACTTCCGGAGTATCTCGGAGTTCGAGGAGGCGGTGCGTCGCGAGGCGGCAAAGTTGCA
TGATGATATAAAAGAGGTACTGTAA

Upstream 100 bases:

>100_bases
GATGGGTGATCACTGTTCATTCATCGGGCGCCATCAGTTATATTAAAAAACGGCAGTGTGTGAACTGACCCGATAATTTT
TCATGTTTTTGCCATCAGTT

Downstream 100 bases:

>100_bases
ATTTGTGCGCATATAGTATATTGGGAGCAGAATTCTTTTCATAATACGGTTTTTTTTGCCTCAAAAGGGTGCGGCTACCG
GCAGGAAGCAGCGGTAACGT

Product: orotidine 5'-phosphate decarboxylase

Products: NA

Alternate protein names: OMP decarboxylase; OMPDCase; OMPdecase [H]

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MSSARDKANRRIASLQSMLCVGLDSDPSKIPTLFHSMERPVLEFNRAIIRATGEHAAAYKVNTAFYESRGLAGMRDLDDT
LQALPPECLSIADAKRADIGNTSRHYAKAFFETWPFDAITVAPYMGFDSLEPFFEYDDKLVFVLCLTSNPGSADFEERIL
DDGRPLYRAVLDRVRSWQRNGNAGIVVGATKASLLQELRQEAPELFFLIPGVGAQGGSMQEAVNQGADPDRGGAVVNVSR
ALIFPKGDFRSISEFEEAVRREAAKLHDDIKEVL

Sequences:

>Translated_274_residues
MSSARDKANRRIASLQSMLCVGLDSDPSKIPTLFHSMERPVLEFNRAIIRATGEHAAAYKVNTAFYESRGLAGMRDLDDT
LQALPPECLSIADAKRADIGNTSRHYAKAFFETWPFDAITVAPYMGFDSLEPFFEYDDKLVFVLCLTSNPGSADFEERIL
DDGRPLYRAVLDRVRSWQRNGNAGIVVGATKASLLQELRQEAPELFFLIPGVGAQGGSMQEAVNQGADPDRGGAVVNVSR
ALIFPKGDFRSISEFEEAVRREAAKLHDDIKEVL
>Mature_273_residues
SSARDKANRRIASLQSMLCVGLDSDPSKIPTLFHSMERPVLEFNRAIIRATGEHAAAYKVNTAFYESRGLAGMRDLDDTL
QALPPECLSIADAKRADIGNTSRHYAKAFFETWPFDAITVAPYMGFDSLEPFFEYDDKLVFVLCLTSNPGSADFEERILD
DGRPLYRAVLDRVRSWQRNGNAGIVVGATKASLLQELRQEAPELFFLIPGVGAQGGSMQEAVNQGADPDRGGAVVNVSRA
LIFPKGDFRSISEFEEAVRREAAKLHDDIKEVL

Specific function: Unknown

COG id: COG0284

COG function: function code F; Orotidine-5'-phosphate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OMP decarboxylase family. Type 2 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR011995
- InterPro:   IPR001754
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00215 OMPdecase [H]

EC number: =4.1.1.23 [H]

Molecular weight: Translated: 30278; Mature: 30146

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSARDKANRRIASLQSMLCVGLDSDPSKIPTLFHSMERPVLEFNRAIIRATGEHAAAYK
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEE
VNTAFYESRGLAGMRDLDDTLQALPPECLSIADAKRADIGNTSRHYAKAFFETWPFDAIT
EHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEE
VAPYMGFDSLEPFFEYDDKLVFVLCLTSNPGSADFEERILDDGRPLYRAVLDRVRSWQRN
ECCCCCCCCCCHHHHCCCCEEEEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCC
GNAGIVVGATKASLLQELRQEAPELFFLIPGVGAQGGSMQEAVNQGADPDRGGAVVNVSR
CCCEEEEECHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCCEEEEEEE
ALIFPKGDFRSISEFEEAVRREAAKLHDDIKEVL
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SSARDKANRRIASLQSMLCVGLDSDPSKIPTLFHSMERPVLEFNRAIIRATGEHAAAYK
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEE
VNTAFYESRGLAGMRDLDDTLQALPPECLSIADAKRADIGNTSRHYAKAFFETWPFDAIT
EHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEE
VAPYMGFDSLEPFFEYDDKLVFVLCLTSNPGSADFEERILDDGRPLYRAVLDRVRSWQRN
ECCCCCCCCCCHHHHCCCCEEEEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCC
GNAGIVVGATKASLLQELRQEAPELFFLIPGVGAQGGSMQEAVNQGADPDRGGAVVNVSR
CCCEEEEECHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCCEEEEEEE
ALIFPKGDFRSISEFEEAVRREAAKLHDDIKEVL
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA