| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is uspF [C]
Identifier: 21672947
GI number: 21672947
Start: 100026
End: 100496
Strand: Reverse
Name: uspF [C]
Synonym: CT0106
Alternate gene names: 21672947
Gene position: 100496-100026 (Counterclockwise)
Preceding gene: 21672948
Following gene: 21672946
Centisome position: 4.66
GC content: 59.66
Gene sequence:
>471_bases ATGACGACAAACCATGTAAAACCATCGAAAATTATGCTCTGCCCTGTCGATTTTTCGCCATCTTCCGAAAGGGCGCTGCT TTATGCCGCCGAACACTGCCCGGCTGACGCCGAGCTGATCGTGCTGTATGTCGGCGACGCCGGAAACGGCGACCGGGGCA CAATGCTCAGAGAGCATCTCCATCAGTTTTCGAGCTATTCCGACCTGCTCTCTGCCTACGGCTGCCGGGTGCGTTTCGCC GTCGAGTACGGCTCGCCCGGCGCGACCATCATCGAATATGCGTCGAAAACCGGGGCAGCTATGATCGTGCTCGGCTCGCA CGGCGCGAGCAATCTGGGGCGCCTGCTGGTTGGCAGCACTGCTGAATCGGTGATGCGCCACGCGCCGTGCCCGGTGCTGG TGCTCCGCTCGCCGGAAGGCGTCAATGAAACCGGAACGGTTCAGCGGAAACAAAAAGAAGCAATCCTGTAA
Upstream 100 bases:
>100_bases AGCTGGCGAACTTGCAGGCCCGATATGAATATGTGATGAATGCCTATTCGGTCAGACGCGCCGCTGGCGATCTGATCGAG CGATAAACGGAGTGATAATC
Downstream 100 bases:
>100_bases ACACCAACGACAGATTTACTATCCATGGCAGAAACGCAGCAATCCAACATCGAAGCACCGGACAACGAAAAAGGCAAGCC AAAACCGGAACGCTCGATGG
Product: universal stress protein
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Protein; Universal Stress Protein Family; UpsA Domain-Containing Protein; Universal Stress Protein Usp
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MTTNHVKPSKIMLCPVDFSPSSERALLYAAEHCPADAELIVLYVGDAGNGDRGTMLREHLHQFSSYSDLLSAYGCRVRFA VEYGSPGATIIEYASKTGAAMIVLGSHGASNLGRLLVGSTAESVMRHAPCPVLVLRSPEGVNETGTVQRKQKEAIL
Sequences:
>Translated_156_residues MTTNHVKPSKIMLCPVDFSPSSERALLYAAEHCPADAELIVLYVGDAGNGDRGTMLREHLHQFSSYSDLLSAYGCRVRFA VEYGSPGATIIEYASKTGAAMIVLGSHGASNLGRLLVGSTAESVMRHAPCPVLVLRSPEGVNETGTVQRKQKEAIL >Mature_155_residues TTNHVKPSKIMLCPVDFSPSSERALLYAAEHCPADAELIVLYVGDAGNGDRGTMLREHLHQFSSYSDLLSAYGCRVRFAV EYGSPGATIIEYASKTGAAMIVLGSHGASNLGRLLVGSTAESVMRHAPCPVLVLRSPEGVNETGTVQRKQKEAIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16690; Mature: 16559
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNHVKPSKIMLCPVDFSPSSERALLYAAEHCPADAELIVLYVGDAGNGDRGTMLREHL CCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHHH HQFSSYSDLLSAYGCRVRFAVEYGSPGATIIEYASKTGAAMIVLGSHGASNLGRLLVGST HHHCCHHHHHHHCCCEEEEEEEECCCCCCEEEECCCCCCEEEEEECCCCCCCCCEEECCC AESVMRHAPCPVLVLRSPEGVNETGTVQRKQKEAIL HHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHCCCC >Mature Secondary Structure TTNHVKPSKIMLCPVDFSPSSERALLYAAEHCPADAELIVLYVGDAGNGDRGTMLREHL CCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHHH HQFSSYSDLLSAYGCRVRFAVEYGSPGATIIEYASKTGAAMIVLGSHGASNLGRLLVGST HHHCCHHHHHHHCCCEEEEEEEECCCCCCEEEECCCCCCEEEEEECCCCCCCCCEEECCC AESVMRHAPCPVLVLRSPEGVNETGTVQRKQKEAIL HHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA