| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is feoB-2 [H]
Identifier: 21672897
GI number: 21672897
Start: 56948
End: 59086
Strand: Reverse
Name: feoB-2 [H]
Synonym: CT0056
Alternate gene names: 21672897
Gene position: 59086-56948 (Counterclockwise)
Preceding gene: 21672898
Following gene: 21672895
Centisome position: 2.74
GC content: 60.64
Gene sequence:
>2139_bases ATGAGCCAGCAGAAAACCATTACGGTCGCGCTTGCCGGAAATCCGAACGCGGGCAAGTCTTCGCTGTTCAACGCGCTGAC CGGCGCTCACCAGCGCGTAGGAAATTTCCCCGGCGTAACCATCGAAAAGCACGAAGGTTATCTCGATTACAAAGGCTACC GCATCACCGTGGTCGATCTGCCCGGCACCTATTCGCTGACGCCGTACTCACCGGAGGAGATCGTCACCCGCCGCTTCATC ATCGACGAGAAACCAGATGTGGTGGTGAACGTCGTCGAGGGCACCAACCTCGAACGCAACCTCATGCTGACCGTGCAGCT CATGGAGATGGAAGTCGATCTGCTCGTGGCGCTCAACATGATGGACGAGGTGGAGGAGAAAGGAATTTCCATCGATCTCG ACCAGCTCGAACAGCTCTTCGGCAGCCACATCGTGCCGATCTCCGCGCGCAATCGCAAGGGGCTCGACGAGCTGCTCGAC CACATCGTCAGCGTCAGCGAAGGGCGAATCGAGATCAAGAAAAACAAAATCACCTTCAGCGCCGAGGTCGAGAAGGCTAT CGACAAGATCGCCCTCCTGCTGGCTCACGAGCGCGAACTCGACGCAGCAGCCAACCACCGCTGGCTCGCCATCAAGCTGC TTGAAAACGACCGCGAGGTCTACACCCAGGTGCAGAAATTTCCGGTGTGGGTCAAAATCGAGCTGGCGTTGCAGGAGGCG ATCACGGAGTGCGGCATTCTGCACAACACCGATCCCGAAGCGCTCATCACCGAAGACCGGCACGCTTTCGTGCGCGGCGC GATGCAGGAGTGCGTTCACCTGCCGAAGGCCACACGAGCCTCGGTGAGCGACTACATCGACATGGTGGTGCTGAACCGGG TACTCGGCCTGCCGGTCTTTTTTCTCGTCGTCTGGGCGATCTTCCAGCTCACCTTCACGCTCGGCAAGCCGCTGGTGGAG GCGCTCGCCTACGCCTTCGACCTGCTTTCGGACACCGTCGCGCCGCACTTGCCCGCCGGAATGGTGCGTTCGATCTTTGT TGACGGCGTGATCTCAGGCGTCGGCAGCGTGGTGGAGTTCCTGCCAAACATCGTGCTGCTTTTCATGGGGCTGTCGTTCC TCGAAGCCTCTGGCTACATGGCGCGTGCGGCCTTCGTGATCGACAAGGTGATGCACCGCTTCGGCCTGCACGGCAAGTCG TTCATTCCGATGATCACCGGCTTCGGCTGCTCGATTCCGGCCATCATGGCGACGCGAACGCTCAAGAGCCGGTCGGATCG TCTCGCCACCATCATGACGATTCCCTTCATGAGCTGCAGCGCAAAACTGCCGGTCTACGTGCTGCTCGCAGGAGCATTCT TCCCGCCAGCGATGGCCGCCAACGTGATGTTCGGCATCTACCTGCTCGGCATCATGATCGGCCTCTGGACGGCGTGGCTG CTGAAATCGACCGTGCTGAAGAGCGACTCGGAGCCCTTCGTGATGGAGCTGCCGCCCTACCGCTGGCCGACGCTCACTTC GGTGGTATTTCAGGCGCGGATGAAGGCCGTGATGTACCTCAAAAAAGCCGGAACGCTGATTCTCGGCGCGGTAATCGTGA TTTGGGCGGCGAGCAACTTCCCGCGCAGCTCGGCGCTCGACGCGGAGCTTGCACAAGAGAAGGCGAAGATCGAGGCAACG GCGGTCGCACCGGAGCTGAAAGCGGAGCAGTTGCAGAAGCTCAAAGCGCGAATCGACGCAGGCCAGCTCGAATACTCGCT CGCCGGACGGAGCGGGAAACTGCTCGAACCGCTCATCCGCCCGCTCGGCTTCGACTGGCGCATCGGCATCTCGCTGGTCA CGGGCCTCGCGGCAAAAGAGGTGGTGGTTTCGACGCTCGGCACGATTTTCTCGATCGGTCACGCCGCCGGACAGACAAGC CTGTCGCAAATTCTTCGGAGCGATCCCAGCTTCAGCAAAGCCACGGCGCTGAGCCTGATGGTGTTCGTGCTGCTCTACAT CCCCTGCGTGGCATCGGTAGGCGTAATGAAAAAAGAGGTCGGCGCATGGAAGCCGGTGCTCCTCTACTCCGTCTATGTGC TCGCCGTGGCCTGGATCGCCTCGTTCATCACCTACCACCTCGCGCTCTTGTGGCTGTGA
Upstream 100 bases:
>100_bases ACGAGGCCGAAGGGATTACCGTACACATACTGGCCGGGGACGAAGGGCATCCGCACGGATGGCCGGGCTTCCGCAGACGC CACCGTTTCGGAAAACGCGC
Downstream 100 bases:
>100_bases GGAGAATCCCTTCTTTAACAATCTCCCCAAACGAAAAACGGCTGTCTTTCCTGGCAGCCGTTTTCATATAACTCCTATAG GACTTATATGACCTACAGGT
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 712; Mature: 711
Protein sequence:
>712_residues MSQQKTITVALAGNPNAGKSSLFNALTGAHQRVGNFPGVTIEKHEGYLDYKGYRITVVDLPGTYSLTPYSPEEIVTRRFI IDEKPDVVVNVVEGTNLERNLMLTVQLMEMEVDLLVALNMMDEVEEKGISIDLDQLEQLFGSHIVPISARNRKGLDELLD HIVSVSEGRIEIKKNKITFSAEVEKAIDKIALLLAHERELDAAANHRWLAIKLLENDREVYTQVQKFPVWVKIELALQEA ITECGILHNTDPEALITEDRHAFVRGAMQECVHLPKATRASVSDYIDMVVLNRVLGLPVFFLVVWAIFQLTFTLGKPLVE ALAYAFDLLSDTVAPHLPAGMVRSIFVDGVISGVGSVVEFLPNIVLLFMGLSFLEASGYMARAAFVIDKVMHRFGLHGKS FIPMITGFGCSIPAIMATRTLKSRSDRLATIMTIPFMSCSAKLPVYVLLAGAFFPPAMAANVMFGIYLLGIMIGLWTAWL LKSTVLKSDSEPFVMELPPYRWPTLTSVVFQARMKAVMYLKKAGTLILGAVIVIWAASNFPRSSALDAELAQEKAKIEAT AVAPELKAEQLQKLKARIDAGQLEYSLAGRSGKLLEPLIRPLGFDWRIGISLVTGLAAKEVVVSTLGTIFSIGHAAGQTS LSQILRSDPSFSKATALSLMVFVLLYIPCVASVGVMKKEVGAWKPVLLYSVYVLAVAWIASFITYHLALLWL
Sequences:
>Translated_712_residues MSQQKTITVALAGNPNAGKSSLFNALTGAHQRVGNFPGVTIEKHEGYLDYKGYRITVVDLPGTYSLTPYSPEEIVTRRFI IDEKPDVVVNVVEGTNLERNLMLTVQLMEMEVDLLVALNMMDEVEEKGISIDLDQLEQLFGSHIVPISARNRKGLDELLD HIVSVSEGRIEIKKNKITFSAEVEKAIDKIALLLAHERELDAAANHRWLAIKLLENDREVYTQVQKFPVWVKIELALQEA ITECGILHNTDPEALITEDRHAFVRGAMQECVHLPKATRASVSDYIDMVVLNRVLGLPVFFLVVWAIFQLTFTLGKPLVE ALAYAFDLLSDTVAPHLPAGMVRSIFVDGVISGVGSVVEFLPNIVLLFMGLSFLEASGYMARAAFVIDKVMHRFGLHGKS FIPMITGFGCSIPAIMATRTLKSRSDRLATIMTIPFMSCSAKLPVYVLLAGAFFPPAMAANVMFGIYLLGIMIGLWTAWL LKSTVLKSDSEPFVMELPPYRWPTLTSVVFQARMKAVMYLKKAGTLILGAVIVIWAASNFPRSSALDAELAQEKAKIEAT AVAPELKAEQLQKLKARIDAGQLEYSLAGRSGKLLEPLIRPLGFDWRIGISLVTGLAAKEVVVSTLGTIFSIGHAAGQTS LSQILRSDPSFSKATALSLMVFVLLYIPCVASVGVMKKEVGAWKPVLLYSVYVLAVAWIASFITYHLALLWL >Mature_711_residues SQQKTITVALAGNPNAGKSSLFNALTGAHQRVGNFPGVTIEKHEGYLDYKGYRITVVDLPGTYSLTPYSPEEIVTRRFII DEKPDVVVNVVEGTNLERNLMLTVQLMEMEVDLLVALNMMDEVEEKGISIDLDQLEQLFGSHIVPISARNRKGLDELLDH IVSVSEGRIEIKKNKITFSAEVEKAIDKIALLLAHERELDAAANHRWLAIKLLENDREVYTQVQKFPVWVKIELALQEAI TECGILHNTDPEALITEDRHAFVRGAMQECVHLPKATRASVSDYIDMVVLNRVLGLPVFFLVVWAIFQLTFTLGKPLVEA LAYAFDLLSDTVAPHLPAGMVRSIFVDGVISGVGSVVEFLPNIVLLFMGLSFLEASGYMARAAFVIDKVMHRFGLHGKSF IPMITGFGCSIPAIMATRTLKSRSDRLATIMTIPFMSCSAKLPVYVLLAGAFFPPAMAANVMFGIYLLGIMIGLWTAWLL KSTVLKSDSEPFVMELPPYRWPTLTSVVFQARMKAVMYLKKAGTLILGAVIVIWAASNFPRSSALDAELAQEKAKIEATA VAPELKAEQLQKLKARIDAGQLEYSLAGRSGKLLEPLIRPLGFDWRIGISLVTGLAAKEVVVSTLGTIFSIGHAAGQTSL SQILRSDPSFSKATALSLMVFVLLYIPCVASVGVMKKEVGAWKPVLLYSVYVLAVAWIASFITYHLALLWL
Specific function: Fe(2+) uptake system, probably driven by GTP [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=739, Percent_Identity=32.2056833558863, Blast_Score=334, Evalue=1e-92,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007167 - InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF04023 FeoA; PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate; PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 78353; Mature: 78222
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQQKTITVALAGNPNAGKSSLFNALTGAHQRVGNFPGVTIEKHEGYLDYKGYRITVVDL CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEECCEEEEEEEC PGTYSLTPYSPEEIVTRRFIIDEKPDVVVNVVEGTNLERNLMLTVQLMEMEVDLLVALNM CCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHH MDEVEEKGISIDLDQLEQLFGSHIVPISARNRKGLDELLDHIVSVSEGRIEIKKNKITFS HHHHHHCCCCCCHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHCCCCCEEEEEECEEEEH AEVEKAIDKIALLLAHERELDAAANHRWLAIKLLENDREVYTQVQKFPVWVKIELALQEA HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCEEEEEHHHHHHH ITECGILHNTDPEALITEDRHAFVRGAMQECVHLPKATRASVSDYIDMVVLNRVLGLPVF HHHCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH FLVVWAIFQLTFTLGKPLVEALAYAFDLLSDTVAPHLPAGMVRSIFVDGVISGVGSVVEF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH LPNIVLLFMGLSFLEASGYMARAAFVIDKVMHRFGLHGKSFIPMITGFGCSIPAIMATRT HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHH LKSRSDRLATIMTIPFMSCSAKLPVYVLLAGAFFPPAMAANVMFGIYLLGIMIGLWTAWL HHHCCCCEEEEEEEHHHCCCCCCCCHHEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH LKSTVLKSDSEPFVMELPPYRWPTLTSVVFQARMKAVMYLKKAGTLILGAVIVIWAASNF HHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC PRSSALDAELAQEKAKIEATAVAPELKAEQLQKLKARIDAGQLEYSLAGRSGKLLEPLIR CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHH PLGFDWRIGISLVTGLAAKEVVVSTLGTIFSIGHAAGQTSLSQILRSDPSFSKATALSLM HCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHH VFVLLYIPCVASVGVMKKEVGAWKPVLLYSVYVLAVAWIASFITYHLALLWL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SQQKTITVALAGNPNAGKSSLFNALTGAHQRVGNFPGVTIEKHEGYLDYKGYRITVVDL CCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEECCEEEEEEEC PGTYSLTPYSPEEIVTRRFIIDEKPDVVVNVVEGTNLERNLMLTVQLMEMEVDLLVALNM CCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHH MDEVEEKGISIDLDQLEQLFGSHIVPISARNRKGLDELLDHIVSVSEGRIEIKKNKITFS HHHHHHCCCCCCHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHCCCCCEEEEEECEEEEH AEVEKAIDKIALLLAHERELDAAANHRWLAIKLLENDREVYTQVQKFPVWVKIELALQEA HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCEEEEEHHHHHHH ITECGILHNTDPEALITEDRHAFVRGAMQECVHLPKATRASVSDYIDMVVLNRVLGLPVF HHHCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH FLVVWAIFQLTFTLGKPLVEALAYAFDLLSDTVAPHLPAGMVRSIFVDGVISGVGSVVEF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH LPNIVLLFMGLSFLEASGYMARAAFVIDKVMHRFGLHGKSFIPMITGFGCSIPAIMATRT HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHH LKSRSDRLATIMTIPFMSCSAKLPVYVLLAGAFFPPAMAANVMFGIYLLGIMIGLWTAWL HHHCCCCEEEEEEEHHHCCCCCCCCHHEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH LKSTVLKSDSEPFVMELPPYRWPTLTSVVFQARMKAVMYLKKAGTLILGAVIVIWAASNF HHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC PRSSALDAELAQEKAKIEATAVAPELKAEQLQKLKARIDAGQLEYSLAGRSGKLLEPLIR CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHH PLGFDWRIGISLVTGLAAKEVVVSTLGTIFSIGHAAGQTSLSQILRSDPSFSKATALSLM HCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHH VFVLLYIPCVASVGVMKKEVGAWKPVLLYSVYVLAVAWIASFITYHLALLWL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12949112 [H]