| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is murC
Identifier: 21672874
GI number: 21672874
Start: 29087
End: 30514
Strand: Reverse
Name: murC
Synonym: CT0033
Alternate gene names: 21672874
Gene position: 30514-29087 (Counterclockwise)
Preceding gene: 21672875
Following gene: 21672873
Centisome position: 1.42
GC content: 64.36
Gene sequence:
>1428_bases GTGCCCCCCATGGAACTGGGAAAAACAAAGAATGTGCATATCGTCGGCATCGGCGGCGCGGGAATGAGCGCCATCGCCGA ACTGCTGCTGAAATCGGGATTCGCGGTCAGCGGCTCTGACCTGGCCTCAGGCGAGGTGATCGACAAGCTTCGTGAGCTTG GCGCGGTAATCCATCAGGGGCACCAGGCCGAAAATGTCGGCGCGAGCGACGTTGTCGTCTACTCCTCGGCAGTGCGTCCC GAGAGCAACGTCGAAATTCTCGCCGCGCAGAAGCTCGGCATTCCGGTCATCAAGCGCGACGAAATGCTCGGCGAGCTGAT GCGCCACAAATCGGGCATCTGCGTCTCGGGCACCCACGGCAAGACCACCACGACCGCAATGGTCGCAACCATGCTGCTCG AAGCGGGCCAGTCGCCGACAGTGATGATCGGCGGCGTGTCGGACTACCTCAAGGGAAGCACGGTGGTCGGCGAGGGCAAG TCCATGGTGATCGAGGCCGACGAGTACGACCGCGCGTTCCTCAAGCTCACGCCGACCATAGCCGTCCTGAACAGCCTCGA ATCGGAGCACATGGACACCTACGGCACGATGGACAACCTGCGCGACTGCTTCGCGGAGTTCGCCAATAAGGTGCCGTTTT ACGGGCGGGTCATCTGCTGCGTTGACTGGCCGGAGATCCGGCGTATCATTCCCCGGCTGAATCGCCGCTACACTACCTTC GGCATCGAGGAGCACGCCGATGTGATGGCTTCGGAGATCGAACCCGGCGATGGGGGCAGCACCTTTACCGTCGAGGCGTT CGGCGAGCGCTACCCCGGCGTACGGCTCAACGTGCCCGGCAGGCATAACGTGCTCAACGCGCTGGCGGCCTTCTCGGTCG GCCTCGAAATCGGCCTGCCGCCGGAGCGGATCATCGCTGGCCTGGCCAGGTACAGCGGAATGCGCCGCCGCTTCCAGGTC AAGTACCGGGGCGCTGACGGCGTGCTCGTCATCGACGATTACGCGCATCACCCCACCGAGGTGAAGGCGACCGTCCGGGC AGCCCGCGACGGATGGAAAGAGCACCGCATCGTGGCGGTTTTCCAGCCGCATCTTTACTCGCGGACGGCGGAGTTCGCCG GTGAGTTCGGCTGGGCGCTCTCCCGCGCCGACACGGTTTACGTGGCGGGCATCTACCCGTCGCGCGAGAAGGCCGAGGAC TATCCCGGTATCACCGGCGAGTTGGTGGCCGAAGCATCGAGAACCGCCGGGGCGAAAAACGTATGGTTCACCGAAGAGCA CGAAGCGCTGCTCGCGGCGCTTCAGGAGGAGGCCGCGCCGGAGACGCTTTTCCTCTTCATGGGGGCGGGCGACATCACGC ATCTGGCCGCGCGATTCGCCGCATGGTGCACGGAGATGCGCAGCAACGCAGACGCAACGGCGTCATGA
Upstream 100 bases:
>100_bases GAAACTCGCGCAAATGGGCGAGGCGGCCCGGCGAGAGGGTCATCCCGGCGCGGCGGCGACACTCGCGGAAAGAATCATCG CGCTATCAAAATCATAAGGA
Downstream 100 bases:
>100_bases TCTCCGCCGTTGACTGGCATAACAGGAGCAACAAGTATGGCTCGTCCGAAACATGAACAGCGGAGCGAGGAACTGCGTCA AGATCCGGCGCTGCCGGACC
Product: UDP-N-acetylmuramate--L-alanine ligase
Products: NA
Alternate protein names: UDP-N-acetylmuramoyl-L-alanine synthetase
Number of amino acids: Translated: 475; Mature: 474
Protein sequence:
>475_residues MPPMELGKTKNVHIVGIGGAGMSAIAELLLKSGFAVSGSDLASGEVIDKLRELGAVIHQGHQAENVGASDVVVYSSAVRP ESNVEILAAQKLGIPVIKRDEMLGELMRHKSGICVSGTHGKTTTTAMVATMLLEAGQSPTVMIGGVSDYLKGSTVVGEGK SMVIEADEYDRAFLKLTPTIAVLNSLESEHMDTYGTMDNLRDCFAEFANKVPFYGRVICCVDWPEIRRIIPRLNRRYTTF GIEEHADVMASEIEPGDGGSTFTVEAFGERYPGVRLNVPGRHNVLNALAAFSVGLEIGLPPERIIAGLARYSGMRRRFQV KYRGADGVLVIDDYAHHPTEVKATVRAARDGWKEHRIVAVFQPHLYSRTAEFAGEFGWALSRADTVYVAGIYPSREKAED YPGITGELVAEASRTAGAKNVWFTEEHEALLAALQEEAAPETLFLFMGAGDITHLAARFAAWCTEMRSNADATAS
Sequences:
>Translated_475_residues MPPMELGKTKNVHIVGIGGAGMSAIAELLLKSGFAVSGSDLASGEVIDKLRELGAVIHQGHQAENVGASDVVVYSSAVRP ESNVEILAAQKLGIPVIKRDEMLGELMRHKSGICVSGTHGKTTTTAMVATMLLEAGQSPTVMIGGVSDYLKGSTVVGEGK SMVIEADEYDRAFLKLTPTIAVLNSLESEHMDTYGTMDNLRDCFAEFANKVPFYGRVICCVDWPEIRRIIPRLNRRYTTF GIEEHADVMASEIEPGDGGSTFTVEAFGERYPGVRLNVPGRHNVLNALAAFSVGLEIGLPPERIIAGLARYSGMRRRFQV KYRGADGVLVIDDYAHHPTEVKATVRAARDGWKEHRIVAVFQPHLYSRTAEFAGEFGWALSRADTVYVAGIYPSREKAED YPGITGELVAEASRTAGAKNVWFTEEHEALLAALQEEAAPETLFLFMGAGDITHLAARFAAWCTEMRSNADATAS >Mature_474_residues PPMELGKTKNVHIVGIGGAGMSAIAELLLKSGFAVSGSDLASGEVIDKLRELGAVIHQGHQAENVGASDVVVYSSAVRPE SNVEILAAQKLGIPVIKRDEMLGELMRHKSGICVSGTHGKTTTTAMVATMLLEAGQSPTVMIGGVSDYLKGSTVVGEGKS MVIEADEYDRAFLKLTPTIAVLNSLESEHMDTYGTMDNLRDCFAEFANKVPFYGRVICCVDWPEIRRIIPRLNRRYTTFG IEEHADVMASEIEPGDGGSTFTVEAFGERYPGVRLNVPGRHNVLNALAAFSVGLEIGLPPERIIAGLARYSGMRRRFQVK YRGADGVLVIDDYAHHPTEVKATVRAARDGWKEHRIVAVFQPHLYSRTAEFAGEFGWALSRADTVYVAGIYPSREKAEDY PGITGELVAEASRTAGAKNVWFTEEHEALLAALQEEAAPETLFLFMGAGDITHLAARFAAWCTEMRSNADATAS
Specific function: Cell wall formation
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family
Homologues:
Organism=Escherichia coli, GI1786279, Length=465, Percent_Identity=40, Blast_Score=291, Evalue=6e-80, Organism=Escherichia coli, GI1790680, Length=397, Percent_Identity=30.4785894206549, Blast_Score=145, Evalue=7e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURC_CHLTE (Q8KGD5)
Other databases:
- EMBL: AE006470 - RefSeq: NP_660939.1 - ProteinModelPortal: Q8KGD5 - SMR: Q8KGD5 - GeneID: 1006451 - GenomeReviews: AE006470_GR - KEGG: cte:CT0033 - NMPDR: fig|194439.1.peg.33 - TIGR: CT0033 - HOGENOM: HBG476594 - OMA: YQPHRYS - ProtClustDB: PRK00421 - BioCyc: CTEP194439:CT_0033-MONOMER - BRENDA: 6.3.2.8 - GO: GO:0005737 - HAMAP: MF_00046 - InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR016040 - InterPro: IPR005758 - Gene3D: G3DSA:3.90.190.20 - Gene3D: G3DSA:3.40.1190.10 - Gene3D: G3DSA:3.40.50.720 - TIGRFAMs: TIGR01082
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M; SSF53244 Mur_ligase_C; SSF53623 Mur_ligase_cen
EC number: =6.3.2.8
Molecular weight: Translated: 51465; Mature: 51334
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPMELGKTKNVHIVGIGGAGMSAIAELLLKSGFAVSGSDLASGEVIDKLRELGAVIHQG CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCC HQAENVGASDVVVYSSAVRPESNVEILAAQKLGIPVIKRDEMLGELMRHKSGICVSGTHG CCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCEEEHHHHHHHHHHHCCCCEEECCCC KTTTTAMVATMLLEAGQSPTVMIGGVSDYLKGSTVVGEGKSMVIEADEYDRAFLKLTPTI CHHHHHHHHHHHHHCCCCCEEEECCHHHHHCCCEEEECCCEEEEECCCCCCEEEEECHHH AVLNSLESEHMDTYGTMDNLRDCFAEFANKVPFYGRVICCVDWPEIRRIIPRLNRRYTTF HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCEEEC GIEEHADVMASEIEPGDGGSTFTVEAFGERYPGVRLNVPGRHNVLNALAAFSVGLEIGLP CCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCC PERIIAGLARYSGMRRRFQVKYRGADGVLVIDDYAHHPTEVKATVRAARDGWKEHRIVAV HHHHHHHHHHHHCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCHHHCEEEEE FQPHLYSRTAEFAGEFGWALSRADTVYVAGIYPSREKAEDYPGITGELVAEASRTAGAKN ECCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHCCCCCCCHHHHHHHHHCCCCCC VWFTEEHEALLAALQEEAAPETLFLFMGAGDITHLAARFAAWCTEMRSNADATAS CCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PPMELGKTKNVHIVGIGGAGMSAIAELLLKSGFAVSGSDLASGEVIDKLRELGAVIHQG CCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCC HQAENVGASDVVVYSSAVRPESNVEILAAQKLGIPVIKRDEMLGELMRHKSGICVSGTHG CCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCEEEHHHHHHHHHHHCCCCEEECCCC KTTTTAMVATMLLEAGQSPTVMIGGVSDYLKGSTVVGEGKSMVIEADEYDRAFLKLTPTI CHHHHHHHHHHHHHCCCCCEEEECCHHHHHCCCEEEECCCEEEEECCCCCCEEEEECHHH AVLNSLESEHMDTYGTMDNLRDCFAEFANKVPFYGRVICCVDWPEIRRIIPRLNRRYTTF HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCEEEC GIEEHADVMASEIEPGDGGSTFTVEAFGERYPGVRLNVPGRHNVLNALAAFSVGLEIGLP CCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCC PERIIAGLARYSGMRRRFQVKYRGADGVLVIDDYAHHPTEVKATVRAARDGWKEHRIVAV HHHHHHHHHHHHCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCHHHCEEEEE FQPHLYSRTAEFAGEFGWALSRADTVYVAGIYPSREKAEDYPGITGELVAEASRTAGAKN ECCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHCCCCCCCHHHHHHHHHCCCCCC VWFTEEHEALLAALQEEAAPETLFLFMGAGDITHLAARFAAWCTEMRSNADATAS CCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12093901