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The map label for this gene is atpF

Identifier: 21672860

GI number: 21672860

Start: 17554

End: 18081

Strand: Reverse

Name: atpF

Synonym: CT0019

Alternate gene names: 21672860

Gene position: 18081-17554 (Counterclockwise)

Preceding gene: 21672861

Following gene: 21672859

Centisome position: 0.84

GC content: 51.7

Gene sequence:

>528_bases
ATGCTAACGTCAGGGATTATTCTGCTCGAAGGCGGGCTTCTCAACCCAAATCCGGGCCTCATATTCTGGACAGCGCTTAC
TTTTCTGATCGTTCTCGTTATTCTCAGGAAAACCGCATGGGGGCCGATCCTGTCGATGCTCGAAGAGCGGGCCAAAAGCA
TTCAATCAGCTATTGATCGAGCTCACACCGCAAAAGACGAGGCTGAGGCGATCCTGAAGAAAAACCGGGATTTGCTGGCC
AAGGCAGATGCCGAAGCCGATAAAATCATCAGGGAAGCCAAGGAGGTAGCGGACAAGCTTCGCGCCGATCTTACCGAGAA
AGCCCATGATGAATCTCGCAAGATAATTGCTTCCGCCAAGGAAGAGATTGAGCAGGAGAAGCGCCGCGCACTGGATGTGC
TCAGAAACGAGGTCGCCGATATGGCCGTAAAAGGCGCCGAGAAAATTATTCGTACCACTCTTGATGCGGACAAGCAAAAA
GCGGTGGTCAACGATATGATCAAGGAAATGGCTGCCAGTCGTAACTGA

Upstream 100 bases:

>100_bases
CTCGCCCTGAAGTAATGCCTCGTGCCATAGCTTAATCCGTCTGCAGTATCTATTTGAAACCGCAGACGGTTTTTTATCAA
ACTGTTAAAGGACTGCGTTC

Downstream 100 bases:

>100_bases
TAATAAAACCTCGGAACTATGTCAAGTGCAATTGCAAGCCGTCGATATGCGGTGGCCTTGCTCGAAGTGGCCGTTGAAGG
CAACTTTCTGGAGAAAGTTA

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MLTSGIILLEGGLLNPNPGLIFWTALTFLIVLVILRKTAWGPILSMLEERAKSIQSAIDRAHTAKDEAEAILKKNRDLLA
KADAEADKIIREAKEVADKLRADLTEKAHDESRKIIASAKEEIEQEKRRALDVLRNEVADMAVKGAEKIIRTTLDADKQK
AVVNDMIKEMAASRN

Sequences:

>Translated_175_residues
MLTSGIILLEGGLLNPNPGLIFWTALTFLIVLVILRKTAWGPILSMLEERAKSIQSAIDRAHTAKDEAEAILKKNRDLLA
KADAEADKIIREAKEVADKLRADLTEKAHDESRKIIASAKEEIEQEKRRALDVLRNEVADMAVKGAEKIIRTTLDADKQK
AVVNDMIKEMAASRN
>Mature_175_residues
MLTSGIILLEGGLLNPNPGLIFWTALTFLIVLVILRKTAWGPILSMLEERAKSIQSAIDRAHTAKDEAEAILKKNRDLLA
KADAEADKIIREAKEVADKLRADLTEKAHDESRKIIASAKEEIEQEKRRALDVLRNEVADMAVKGAEKIIRTTLDADKQK
AVVNDMIKEMAASRN

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

Organism=Escherichia coli, GI1790174, Length=160, Percent_Identity=34.375, Blast_Score=77, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_CHLTE (Q8KGE9)

Other databases:

- EMBL:   AE006470
- RefSeq:   NP_660925.1
- GeneID:   1006261
- GenomeReviews:   AE006470_GR
- KEGG:   cte:CT0019
- NMPDR:   fig|194439.1.peg.19
- TIGR:   CT0019
- HOGENOM:   HBG617328
- OMA:   NPGLIFW
- ProtClustDB:   PRK14472
- BioCyc:   CTEP194439:CT_0019-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 19437; Mature: 19437

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xbd003bc)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTSGIILLEGGLLNPNPGLIFWTALTFLIVLVILRKTAWGPILSMLEERAKSIQSAIDR
CCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AHTAKDEAEAILKKNRDLLAKADAEADKIIREAKEVADKLRADLTEKAHDESRKIIASAK
HHCCHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEIEQEKRRALDVLRNEVADMAVKGAEKIIRTTLDADKQKAVVNDMIKEMAASRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MLTSGIILLEGGLLNPNPGLIFWTALTFLIVLVILRKTAWGPILSMLEERAKSIQSAIDR
CCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AHTAKDEAEAILKKNRDLLAKADAEADKIIREAKEVADKLRADLTEKAHDESRKIIASAK
HHCCHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEIEQEKRRALDVLRNEVADMAVKGAEKIIRTTLDADKQKAVVNDMIKEMAASRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12093901