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The map label for this gene is ybaX

Identifier: 21672728

GI number: 21672728

Start: 527662

End: 528360

Strand: Reverse

Name: ybaX

Synonym: BUsg463

Alternate gene names: 21672728

Gene position: 528360-527662 (Counterclockwise)

Preceding gene: 21672736

Following gene: 21672721

Centisome position: 82.37

GC content: 24.75

Gene sequence:

>699_bases
ATGAAAAAAATACTGATAATTTTTAGTGGTGGGCAAGATTCAACTACTTGCTTAATACATTATACTAATATATATAAAGA
AATTTACTGTATTACATTTGATTATAATCAGCTTCATAAATCTGAAATTGATTCTGCTCGTTTTATATCAAATTATTTTA
ATGTGAAAAAACACATATTTGTCGATCTTAAATGTTTAAAAAATCTTTCAATAAGTAGTTTAACAGATGAAAAAATTTCT
ATTCTTGATAATCATCCGTTAAATTTTTCATTACCAAGTACTTTTGTTCCAGGTCGTAATATTTTATTTTTAACTTTATC
TTCTATATATGCTTTTAATCATCAAATTAATTCGATTGTTTTAGGAGTAAATGAAATCGATTTTTCTGGTTATCCAGATT
GTAGAAACGCATTTTTAAAAAAAATGAATGATGTTGTTCAAATTGGTATGAATTGTAAGATTAACTTTCAATCTCCTTTA
ATTAATTTAAGTAAAGCGGAAATATGGGCTTTGTCAGATTATTGGAATTCTACTCAATTTATTCTTAATAATACAGTCAC
TTGTTATCAAGGTATTCAAGGAAAAGGTTGTGGTCAATGTCAATCATGTATTCTTAGGAACGATGGATTCAATAAGTGGA
AATCTAATCCTTCTTACTATATGAAAAAGTTAAAAGAAAAGTTTAATTTTGATAATTAA

Upstream 100 bases:

>100_bases
TTCATTGAAAAATGAATTTATATTTCAATATATTTTTGTAAATTAATCATATACAATATTAATTTCTAAATCGTTTTTAT
AAATTTTTTGTAAATAAATC

Downstream 100 bases:

>100_bases
TCTTAAAAAATTAATATATAAATGATTTTTTTTAAAAAATAATTATATTAACTTGTTAAAAGTTATCTGTTTTATTATAT
AAAATTGTTGCCTTTCTATG

Product: hypothetical protein

Products: NA

Alternate protein names: 7-cyano-7-carbaguanine synthase; PreQ(0) synthase; Queuosine biosynthesis protein queC

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MKKILIIFSGGQDSTTCLIHYTNIYKEIYCITFDYNQLHKSEIDSARFISNYFNVKKHIFVDLKCLKNLSISSLTDEKIS
ILDNHPLNFSLPSTFVPGRNILFLTLSSIYAFNHQINSIVLGVNEIDFSGYPDCRNAFLKKMNDVVQIGMNCKINFQSPL
INLSKAEIWALSDYWNSTQFILNNTVTCYQGIQGKGCGQCQSCILRNDGFNKWKSNPSYYMKKLKEKFNFDN

Sequences:

>Translated_232_residues
MKKILIIFSGGQDSTTCLIHYTNIYKEIYCITFDYNQLHKSEIDSARFISNYFNVKKHIFVDLKCLKNLSISSLTDEKIS
ILDNHPLNFSLPSTFVPGRNILFLTLSSIYAFNHQINSIVLGVNEIDFSGYPDCRNAFLKKMNDVVQIGMNCKINFQSPL
INLSKAEIWALSDYWNSTQFILNNTVTCYQGIQGKGCGQCQSCILRNDGFNKWKSNPSYYMKKLKEKFNFDN
>Mature_232_residues
MKKILIIFSGGQDSTTCLIHYTNIYKEIYCITFDYNQLHKSEIDSARFISNYFNVKKHIFVDLKCLKNLSISSLTDEKIS
ILDNHPLNFSLPSTFVPGRNILFLTLSSIYAFNHQINSIVLGVNEIDFSGYPDCRNAFLKKMNDVVQIGMNCKINFQSPL
INLSKAEIWALSDYWNSTQFILNNTVTCYQGIQGKGCGQCQSCILRNDGFNKWKSNPSYYMKKLKEKFNFDN

Specific function: Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))

COG id: COG0603

COG function: function code R; Predicted PP-loop superfamily ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the queC family

Homologues:

Organism=Escherichia coli, GI1786648, Length=227, Percent_Identity=45.8149779735683, Blast_Score=244, Evalue=3e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): QUEC_BUCAP (Q8K986)

Other databases:

- EMBL:   AE013218
- RefSeq:   NP_660795.1
- ProteinModelPortal:   Q8K986
- SMR:   Q8K986
- EnsemblBacteria:   EBBUCT00000000071
- GeneID:   1005702
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg463
- HOGENOM:   HBG553284
- OMA:   CETDYSG
- BioCyc:   BAPH198804:BUSG463-MONOMER
- HAMAP:   MF_01633_B
- InterPro:   IPR018317
- InterPro:   IPR014729
- Gene3D:   G3DSA:3.40.50.620
- PIRSF:   PIRSF006293
- TIGRFAMs:   TIGR00364

Pfam domain/function: PF06508 ExsB

EC number: NA

Molecular weight: Translated: 26720; Mature: 26720

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILIIFSGGQDSTTCLIHYTNIYKEIYCITFDYNQLHKSEIDSARFISNYFNVKKHIF
CCEEEEEEECCCCCEEEEEEEECCCEEEEEEEECHHHHHHHHCHHHHHHHHHHCCHHHEE
VDLKCLKNLSISSLTDEKISILDNHPLNFSLPSTFVPGRNILFLTLSSIYAFNHQINSIV
EEEHHHCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCEEE
LGVNEIDFSGYPDCRNAFLKKMNDVVQIGMNCKINFQSPLINLSKAEIWALSDYWNSTQF
EEEEECCCCCCCHHHHHHHHHHHHHHEECCCEEEEECCCCEECCCCEEEEECCCCCCEEE
ILNNTVTCYQGIQGKGCGQCQSCILRNDGFNKWKSNPSYYMKKLKEKFNFDN
EECCCEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKILIIFSGGQDSTTCLIHYTNIYKEIYCITFDYNQLHKSEIDSARFISNYFNVKKHIF
CCEEEEEEECCCCCEEEEEEEECCCEEEEEEEECHHHHHHHHCHHHHHHHHHHCCHHHEE
VDLKCLKNLSISSLTDEKISILDNHPLNFSLPSTFVPGRNILFLTLSSIYAFNHQINSIV
EEEHHHCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCEEE
LGVNEIDFSGYPDCRNAFLKKMNDVVQIGMNCKINFQSPLINLSKAEIWALSDYWNSTQF
EEEEECCCCCCCHHHHHHHHHHHHHHEECCCEEEEECCCCEECCCCEEEEECCCCCCEEE
ILNNTVTCYQGIQGKGCGQCQSCILRNDGFNKWKSNPSYYMKKLKEKFNFDN
EECCCEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12089438