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The map label for this gene is cyoC

Identifier: 21672719

GI number: 21672719

Start: 515322

End: 515891

Strand: Reverse

Name: cyoC

Synonym: BUsg454

Alternate gene names: 21672719

Gene position: 515891-515322 (Counterclockwise)

Preceding gene: 21672720

Following gene: 30410824

Centisome position: 80.43

GC content: 22.81

Gene sequence:

>570_bases
ATGATAAAAGAAACAATGAGAAATAATAAACTATTCGGCTTGTGGATATATTTGATGAGCGATTGTATCATATTCGCTGT
TCTTTTTGCAGTATATGCTATTATTTCTTCAAATTTTTCTACAAATTTGATCAATCATAAAATTTTTAATTTATCTTATG
TTTTTCTCGAAACATTGATTTTGTTATTAAGTTCATTGTCATCTGGTATGCTCACCATACAAAAAAATAAAAACAACATT
AAAATAATATATTTTTATTTACTTTTAACATTTTTTTTAGGCTTGTCTTTTCTATTAATGGAAGTAAATGAATTTTATAA
GCTTATTTTAGAAAATTGTAGTCCTAGTCAACATGCTTTTTTTTCTATTTTTTTTACCATTGTTGGTGTTCATGGTATTC
ATGTTTTTTTTGGTTTAATTTTTATATTATCTATTTTGTATCAACTGTTTTATTTAGGAATAACTAACACTATTCGCATT
CGAATATTATGTTTTAGTTTATTTTGGCATTTTTTAGACATTATATGGATCTGTGTTTTTACTTTTGTTTATTTAAATGG
AGTTATTTAA

Upstream 100 bases:

>100_bases
TTAAAAGTATAGATGAAAATACTGAATATACTGTATCAGTAAAAGAGATTGAAAGTATTGAAAATCGACACTTAGAAAAT
GTTCAAAAAGCAGGTTTAAA

Downstream 100 bases:

>100_bases
TGAATAAATATAAAAAAATAAAAAATAATTTTGATAAAGAAAAAAAGTCTTATATAGTAGGTTTTTTATTTTCTTTATTT
TTAACTATTATTCCCTTTTT

Product: cytochrome O ubiquinol oxidase C

Products: NA

Alternate protein names: Cytochrome o ubiquinol oxidase subunit III

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MIKETMRNNKLFGLWIYLMSDCIIFAVLFAVYAIISSNFSTNLINHKIFNLSYVFLETLILLLSSLSSGMLTIQKNKNNI
KIIYFYLLLTFFLGLSFLLMEVNEFYKLILENCSPSQHAFFSIFFTIVGVHGIHVFFGLIFILSILYQLFYLGITNTIRI
RILCFSLFWHFLDIIWICVFTFVYLNGVI

Sequences:

>Translated_189_residues
MIKETMRNNKLFGLWIYLMSDCIIFAVLFAVYAIISSNFSTNLINHKIFNLSYVFLETLILLLSSLSSGMLTIQKNKNNI
KIIYFYLLLTFFLGLSFLLMEVNEFYKLILENCSPSQHAFFSIFFTIVGVHGIHVFFGLIFILSILYQLFYLGITNTIRI
RILCFSLFWHFLDIIWICVFTFVYLNGVI
>Mature_189_residues
MIKETMRNNKLFGLWIYLMSDCIIFAVLFAVYAIISSNFSTNLINHKIFNLSYVFLETLILLLSSLSSGMLTIQKNKNNI
KIIYFYLLLTFFLGLSFLLMEVNEFYKLILENCSPSQHAFFSIFFTIVGVHGIHVFFGLIFILSILYQLFYLGITNTIRI
RILCFSLFWHFLDIIWICVFTFVYLNGVI

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration

COG id: COG1845

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 3 family

Homologues:

Organism=Escherichia coli, GI1786633, Length=182, Percent_Identity=46.7032967032967, Blast_Score=180, Evalue=7e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CYOC_BUCAP (Q8K995)

Other databases:

- EMBL:   AE013218
- RefSeq:   NP_660786.1
- ProteinModelPortal:   Q8K995
- SMR:   Q8K995
- EnsemblBacteria:   EBBUCT00000000113
- GeneID:   1005711
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg454
- GeneTree:   EBGT00050000008053
- HOGENOM:   HBG565518
- OMA:   FALVGMH
- ProtClustDB:   CLSK316276
- BioCyc:   BAPH198804:BUSG454-MONOMER
- InterPro:   IPR000298
- InterPro:   IPR013833
- InterPro:   IPR014206
- Gene3D:   G3DSA:1.20.120.80
- PANTHER:   PTHR11403
- TIGRFAMs:   TIGR02842

Pfam domain/function: PF00510 COX3; SSF81452 CytC_oxdse_III

EC number: 1.10.3.-

Molecular weight: Translated: 22163; Mature: 22163

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: PS50253 COX3

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xb21abf8)-; HASH(0xc609e28)-; HASH(0xc64d098)-; HASH(0xc3c16f8)-; HASH(0xc26349c)-;

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKETMRNNKLFGLWIYLMSDCIIFAVLFAVYAIISSNFSTNLINHKIFNLSYVFLETLI
CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LLLSSLSSGMLTIQKNKNNIKIIYFYLLLTFFLGLSFLLMEVNEFYKLILENCSPSQHAF
HHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
FSIFFTIVGVHGIHVFFGLIFILSILYQLFYLGITNTIRIRILCFSLFWHFLDIIWICVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
TFVYLNGVI
HHHHHHCCH
>Mature Secondary Structure
MIKETMRNNKLFGLWIYLMSDCIIFAVLFAVYAIISSNFSTNLINHKIFNLSYVFLETLI
CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LLLSSLSSGMLTIQKNKNNIKIIYFYLLLTFFLGLSFLLMEVNEFYKLILENCSPSQHAF
HHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
FSIFFTIVGVHGIHVFFGLIFILSILYQLFYLGITNTIRIRILCFSLFWHFLDIIWICVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
TFVYLNGVI
HHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12089438