| Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
|---|---|
| Accession | NC_004061 |
| Length | 641,454 |
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The map label for this gene is asd
Identifier: 21672698
GI number: 21672698
Start: 489884
End: 490999
Strand: Reverse
Name: asd
Synonym: BUsg433
Alternate gene names: 21672698
Gene position: 490999-489884 (Counterclockwise)
Preceding gene: 21672706
Following gene: 21672687
Centisome position: 76.54
GC content: 27.69
Gene sequence:
>1116_bases ATGACGAAGTCTGTTGGAATAATTGGTTGGCGCGGAATGGTAGGATCAGTTTTATTAAAAAGAATGCAAGAAGAAAATGA TTTTTCAAAAATTATTCCTTATTTTTTTTCAACGTCTCAATCTGGTCAAGATGGTCCTATTATAAATAATATTTTATCTA AAAATTTAAAGGATGCATATAATATTAATTTATTACAGGAAATGGATATTATTATTACATGTCAAGGAAGTTCTTACACT GAAAAAATTTATCCAAAATTGCGTAATAATAATTGGCAAGGTTATTGGATAGATGCTGCTTCTACATTACGAATGGAAAA AGATGCTACAATTATATTAGATCCTGTTAATTTAAATGTTATAAATAATGCATTGGATAAAGGAATTAAAACTTTTGTAG GTGGTAATTGTACTGTGAGTTTGATGTTAATGGCTTTAGGAGGGTTGTTTGTAAACAATTTAATAGATTGGGTTTTTGTA TCTACTTATCAAGCAGCATCAGGAGCTGGTTCTCGTTATGTAATTGAATTATTAAAACAAATGGGTTCTTTATATAATGT CGTTTCTAAAGATTTATTAGATAAATCTTATTCTGTTTTAGATATTGAAAAAAAAGTTACTCAAGAAAGTCGTAGTAAAA ATTTTCCATTAGAAAATTTTTCTGTACCATTAGCAACTAGTTTAATACCATGGATAGATGTAGAAATGAAAAATGGTCAA AGTCGAGAAGAGTGGAAAGGACAAGCTGAAACAAACAAAATTTTAAATTTGAAAAAAAAAGTATTAATTGACGGAACTTG TGTTCGTATAAGTTCAATTCGATGTCATAGTCAGTCATTTTTAATTAAATTAAACAAAGATATTTCTCTAGAAAATATAA AAAAAATAATTGTTAATCATAATCAATGGGTTGATGTTATTCCTAACAATATGCAAAAAACATTATGTAATTTAACTCCA TCTGCGGTGACTGATACATTAAATATACCAATAGGTCGATTAAGAAAATTAAATATAGATGATCGATATCTTTCTGCTTT TACTGTGGGAGATCAGTTGTTATGGGGTGCCGCTGAACCTTTAAGAAGAATGCTAAACTTATTAGTTAATATTTAA
Upstream 100 bases:
>100_bases TAGTATTTATTTTCGGAGGACGGTAAGTTTTTACTTTAACTGAATAAGTTGTCAATTTTGATAAAAATTATTGTTAATTT AAAAATCCGTATATTAATTA
Downstream 100 bases:
>100_bases TTTATTTTTAATAATTCTTAATTATATAGTATATATTAATATACACACCCAGTGTGTATATTAATCTTTTGATTTTTTTA CATAAATTGTATTGATTCAT
Product: aspartate-semialdehyde dehydrogenase
Products: NA
Alternate protein names: ASA dehydrogenase
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MTKSVGIIGWRGMVGSVLLKRMQEENDFSKIIPYFFSTSQSGQDGPIINNILSKNLKDAYNINLLQEMDIIITCQGSSYT EKIYPKLRNNNWQGYWIDAASTLRMEKDATIILDPVNLNVINNALDKGIKTFVGGNCTVSLMLMALGGLFVNNLIDWVFV STYQAASGAGSRYVIELLKQMGSLYNVVSKDLLDKSYSVLDIEKKVTQESRSKNFPLENFSVPLATSLIPWIDVEMKNGQ SREEWKGQAETNKILNLKKKVLIDGTCVRISSIRCHSQSFLIKLNKDISLENIKKIIVNHNQWVDVIPNNMQKTLCNLTP SAVTDTLNIPIGRLRKLNIDDRYLSAFTVGDQLLWGAAEPLRRMLNLLVNI
Sequences:
>Translated_371_residues MTKSVGIIGWRGMVGSVLLKRMQEENDFSKIIPYFFSTSQSGQDGPIINNILSKNLKDAYNINLLQEMDIIITCQGSSYT EKIYPKLRNNNWQGYWIDAASTLRMEKDATIILDPVNLNVINNALDKGIKTFVGGNCTVSLMLMALGGLFVNNLIDWVFV STYQAASGAGSRYVIELLKQMGSLYNVVSKDLLDKSYSVLDIEKKVTQESRSKNFPLENFSVPLATSLIPWIDVEMKNGQ SREEWKGQAETNKILNLKKKVLIDGTCVRISSIRCHSQSFLIKLNKDISLENIKKIIVNHNQWVDVIPNNMQKTLCNLTP SAVTDTLNIPIGRLRKLNIDDRYLSAFTVGDQLLWGAAEPLRRMLNLLVNI >Mature_370_residues TKSVGIIGWRGMVGSVLLKRMQEENDFSKIIPYFFSTSQSGQDGPIINNILSKNLKDAYNINLLQEMDIIITCQGSSYTE KIYPKLRNNNWQGYWIDAASTLRMEKDATIILDPVNLNVINNALDKGIKTFVGGNCTVSLMLMALGGLFVNNLIDWVFVS TYQAASGAGSRYVIELLKQMGSLYNVVSKDLLDKSYSVLDIEKKVTQESRSKNFPLENFSVPLATSLIPWIDVEMKNGQS REEWKGQAETNKILNLKKKVLIDGTCVRISSIRCHSQSFLIKLNKDISLENIKKIIVNHNQWVDVIPNNMQKTLCNLTPS AVTDTLNIPIGRLRKLNIDDRYLSAFTVGDQLLWGAAEPLRRMLNLLVNI
Specific function: Second step in the common biosynthetic pathway leading from Asp to the cell wall precursor meso-diaminopimelate, to Lys, to Met, to Ile and to Thr. [C]
COG id: COG0136
COG function: function code E; Aspartate-semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate-semialdehyde dehydrogenase family
Homologues:
Organism=Escherichia coli, GI1789841, Length=367, Percent_Identity=61.8528610354223, Blast_Score=494, Evalue=1e-141,
Paralogues:
None
Copy number: 900 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): DHAS_BUCAP (Q8K9B5)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660765.1 - ProteinModelPortal: Q8K9B5 - SMR: Q8K9B5 - EnsemblBacteria: EBBUCT00000000023 - GeneID: 1005553 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg433 - GeneTree: EBGT00050000008194 - HOGENOM: HBG289760 - OMA: IDGLCVR - ProtClustDB: PRK06598 - BioCyc: BAPH198804:BUSG433-MONOMER - GO: GO:0005737 - InterPro: IPR000319 - InterPro: IPR011534 - InterPro: IPR012080 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 - Gene3D: G3DSA:3.40.50.720 - PIRSF: PIRSF000148 - SMART: SM00859 - TIGRFAMs: TIGR01745
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC
EC number: =1.2.1.11
Molecular weight: Translated: 41786; Mature: 41655
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: PS01103 ASD
Important sites: ACT_SITE 137-137
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKSVGIIGWRGMVGSVLLKRMQEENDFSKIIPYFFSTSQSGQDGPIINNILSKNLKDAY CCCCCEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHH NINLLQEMDIIITCQGSSYTEKIYPKLRNNNWQGYWIDAASTLRMEKDATIILDPVNLNV CCCEEEECCEEEEECCCCCHHHHHHHHCCCCCCEEEEECHHHEEECCCCEEEEECCCHHH INNALDKGIKTFVGGNCTVSLMLMALGGLFVNNLIDWVFVSTYQAASGAGSRYVIELLKQ HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH MGSLYNVVSKDLLDKSYSVLDIEKKVTQESRSKNFPLENFSVPLATSLIPWIDVEMKNGQ HHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCCCCCCCHHHHCCCEEEEEECCCC SREEWKGQAETNKILNLKKKVLIDGTCVRISSIRCHSQSFLIKLNKDISLENIKKIIVNH CHHHHCCCHHHHHHHHHHHHEEECCCEEEEEEEEECCCEEEEEECCCCCHHHHHHHHHCC NQWVDVIPNNMQKTLCNLTPSAVTDTLNIPIGRLRKLNIDDRYLSAFTVGDQLLWGAAEP CCEEEECCCHHHHHHHCCCHHHHHHCCCCCHHHEEECCCCHHHHHEEECCHHHHHCCHHH LRRMLNLLVNI HHHHHHHHHCC >Mature Secondary Structure TKSVGIIGWRGMVGSVLLKRMQEENDFSKIIPYFFSTSQSGQDGPIINNILSKNLKDAY CCCCEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHH NINLLQEMDIIITCQGSSYTEKIYPKLRNNNWQGYWIDAASTLRMEKDATIILDPVNLNV CCCEEEECCEEEEECCCCCHHHHHHHHCCCCCCEEEEECHHHEEECCCCEEEEECCCHHH INNALDKGIKTFVGGNCTVSLMLMALGGLFVNNLIDWVFVSTYQAASGAGSRYVIELLKQ HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH MGSLYNVVSKDLLDKSYSVLDIEKKVTQESRSKNFPLENFSVPLATSLIPWIDVEMKNGQ HHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCCCCCCCHHHHCCCEEEEEECCCC SREEWKGQAETNKILNLKKKVLIDGTCVRISSIRCHSQSFLIKLNKDISLENIKKIIVNH CHHHHCCCHHHHHHHHHHHHEEECCCEEEEEEEEECCCEEEEEECCCCCHHHHHHHHHCC NQWVDVIPNNMQKTLCNLTPSAVTDTLNIPIGRLRKLNIDDRYLSAFTVGDQLLWGAAEP CCEEEECCCHHHHHHHCCCHHHHHHCCCCCHHHEEECCCCHHHHHEEECCHHHHHCCHHH LRRMLNLLVNI HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12089438