| Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
|---|---|
| Accession | NC_004061 |
| Length | 641,454 |
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The map label for this gene is ybeN
Identifier: 21672696
GI number: 21672696
Start: 488855
End: 489505
Strand: Direct
Name: ybeN
Synonym: BUsg431
Alternate gene names: 21672696
Gene position: 488855-489505 (Clockwise)
Preceding gene: 21672695
Following gene: 21672697
Centisome position: 76.21
GC content: 22.43
Gene sequence:
>651_bases ATGAAAGAAATATATGCAATATTTGGAGGGAATTTTGATCCTATTCATTATGGTCATATTACTTCTGCTGAAAAATTATC GCGCGAAATTTCAATAAAAAAAATAATATTACTGCCTAATTATGGCCCTCCTCATCGTTCTAAAACAAAAACATCTATAA TAGACAGATTAAAAATGATTAAATTCGCTATTAAAGATAATAAACTATTTACAATAAGTTATTTAGAAACAAAAAAAAAT ACAACTTTTTATACGATAGAAACATTAAAAAAAATAAGAAAAAAAATTGGTTATCTGCAACCATTATGTTTTATAATAGG AGAAGATAATCTAAATAATTTAAATATCTGGAAAGATTGGAAAAAAATATTATCTTTATCTCATCTATTAATTTGTCCTA GAATTCATATAAAAAAAAGTAATCCTAAATTAAAAAAATGGATCTCGGATCATACTACTAAAAATAGTAATTTATTACAT AAAAAACCATTTGGTTTTATTTTTTTTTCAAAAATGTCTATGCTTAATATCTCTTCAACTGCAATCAGGAAAAGTTATTA CGAAGGTAAAAGCGCTTGTGGATTATTACCTTCAAAAATAGATAAATATATTTTATCAAAAAATCTATATAAAATTTATA ATCAAAATTGA
Upstream 100 bases:
>100_bases GAAATAAAAATAAAAAAAGAATATAATAATTCTGTATGGATTCAATTAAAAACACTAACATTATTACTATCTTCACCAAT GAAATATACACCGTAAAAAC
Downstream 100 bases:
>100_bases TTTCTATTTCTTTAAAAAAAACAAAATATGAAAAAAAAAATATTATATTAAATTTAATTGGACTTCGATGTCCAGAACCT ATTATGGTAATAAGAAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Deamido-NAD(+) diphosphorylase; Deamido-NAD(+) pyrophosphorylase; Nicotinate mononucleotide adenylyltransferase; NaMN adenylyltransferase
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MKEIYAIFGGNFDPIHYGHITSAEKLSREISIKKIILLPNYGPPHRSKTKTSIIDRLKMIKFAIKDNKLFTISYLETKKN TTFYTIETLKKIRKKIGYLQPLCFIIGEDNLNNLNIWKDWKKILSLSHLLICPRIHIKKSNPKLKKWISDHTTKNSNLLH KKPFGFIFFSKMSMLNISSTAIRKSYYEGKSACGLLPSKIDKYILSKNLYKIYNQN
Sequences:
>Translated_216_residues MKEIYAIFGGNFDPIHYGHITSAEKLSREISIKKIILLPNYGPPHRSKTKTSIIDRLKMIKFAIKDNKLFTISYLETKKN TTFYTIETLKKIRKKIGYLQPLCFIIGEDNLNNLNIWKDWKKILSLSHLLICPRIHIKKSNPKLKKWISDHTTKNSNLLH KKPFGFIFFSKMSMLNISSTAIRKSYYEGKSACGLLPSKIDKYILSKNLYKIYNQN >Mature_216_residues MKEIYAIFGGNFDPIHYGHITSAEKLSREISIKKIILLPNYGPPHRSKTKTSIIDRLKMIKFAIKDNKLFTISYLETKKN TTFYTIETLKKIRKKIGYLQPLCFIIGEDNLNNLNIWKDWKKILSLSHLLICPRIHIKKSNPKLKKWISDHTTKNSNLLH KKPFGFIFFSKMSMLNISSTAIRKSYYEGKSACGLLPSKIDKYILSKNLYKIYNQN
Specific function: Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
COG id: COG1057
COG function: function code H; Nicotinic acid mononucleotide adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nadD family
Homologues:
Organism=Escherichia coli, GI1786858, Length=213, Percent_Identity=38.0281690140845, Blast_Score=176, Evalue=1e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NADD_BUCAP (Q8K9B7)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660763.1 - ProteinModelPortal: Q8K9B7 - SMR: Q8K9B7 - EnsemblBacteria: EBBUCT00000000389 - GeneID: 1005732 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg431 - GeneTree: EBGT00050000008101 - HOGENOM: HBG739448 - OMA: IQCAPAG - ProtClustDB: CLSK316217 - BioCyc: BAPH198804:BUSG431-MONOMER - HAMAP: MF_00244 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR005248 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR12039 - TIGRFAMs: TIGR00125 - TIGRFAMs: TIGR00482
Pfam domain/function: PF01467 CTP_transf_2
EC number: =2.7.7.18
Molecular weight: Translated: 25218; Mature: 25218
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEIYAIFGGNFDPIHYGHITSAEKLSREISIKKIILLPNYGPPHRSKTKTSIIDRLKMI CCCEEEEECCCCCCEECCCCCCHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHHHH KFAIKDNKLFTISYLETKKNTTFYTIETLKKIRKKIGYLQPLCFIIGEDNLNNLNIWKDW HHEECCCEEEEEEEEECCCCCEEEEHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHH KKILSLSHLLICPRIHIKKSNPKLKKWISDHTTKNSNLLHKKPFGFIFFSKMSMLNISST HHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCCCCEECCCCCEEEEEHHHHHCCHHH AIRKSYYEGKSACGLLPSKIDKYILSKNLYKIYNQN HHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKEIYAIFGGNFDPIHYGHITSAEKLSREISIKKIILLPNYGPPHRSKTKTSIIDRLKMI CCCEEEEECCCCCCEECCCCCCHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHHHH KFAIKDNKLFTISYLETKKNTTFYTIETLKKIRKKIGYLQPLCFIIGEDNLNNLNIWKDW HHEECCCEEEEEEEEECCCCCEEEEHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHH KKILSLSHLLICPRIHIKKSNPKLKKWISDHTTKNSNLLHKKPFGFIFFSKMSMLNISST HHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCCCCEECCCCCEEEEEHHHHHCCHHH AIRKSYYEGKSACGLLPSKIDKYILSKNLYKIYNQN HHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12089438