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The map label for this gene is ompA

Identifier: 21672596

GI number: 21672596

Start: 366600

End: 367643

Strand: Reverse

Name: ompA

Synonym: BUsg320

Alternate gene names: 21672596

Gene position: 367643-366600 (Counterclockwise)

Preceding gene: 21672597

Following gene: 21672594

Centisome position: 57.31

GC content: 25.57

Gene sequence:

>1044_bases
ATGAAAAAACAAGCTCTTACTATTATTTTTTTATTAGTAAGCTTAGTGACTGGCATTCAAGCAAAAGAAAATGATCACTG
GTATTTAGGTACCAAAATGGGATGGTCTGATTTTAATATTTTAGAATATAGAAGTAAAGATATCACACCTTTTGATACAA
AAATTGATACAAAAAATCCATTAGGTGCACCTGTATTCGGATTATTTTTAGGTTATGAATTTAATCCGTATTTTTCTTTT
GAAATAGAAAATGATACAACAGGATTTTCTCCTCATTTGATTTTTCAAAAAAATGAACAAAATATACAAATTAATAGTCT
TCAACTAGCTACAAAATTGTCATATCCTATAACAGACGATTTTCATATTTATACGCAATTAGGCGGAATGATGTTTTGGG
ATAATTTATCTTTTAAAAAAGATTTACAAAATATCTTTACTGAAAAAAGCAGATTAATCCCTAATGTATCTTTAGGTGCT
GAATATATTTTTAATAAAAAATTTATTACTAGATTAGATTATACTTGGAAAAGTAATATTGCAAAAATAATGAATTTATC
TATGAAACCTGTTTTAGGAGATGTTGCTCTGTCTTTTGGATGGAAATTTGGAAAATCTAATATAAACGAAATATTTTCTT
CATATATTCCTCAATCGTCAGATAAACAATATGTTGCTCTTAATGAAAATATTAATTTTCCTTTTAATAGTACAGAACTT
AAACCTATATCTCATGACAAATTACAGAAATTACAAAAAGAAATAAAAAATATTAAATCAAAAAATATTTTTATTATGTT
ATCTGGTCATGCTGATAGAATAGGAAATAAAGAATATAATCAAAAATTATCTGAAAATCGTGCATACAGTATTAAAAATT
ATTTTACTTCACATGGTATATCGCAAGATAAAATAAGTATTCAAGGAATGGGTAATGAATTTTCTTTAACTAATCAGATA
TGCAAGGATGTATCTGATAGACCTTTATTAATCAGTTGTTTAGCACCTGATCGTCGTGTGGAAATTGAAGTTTTGTCTGA
TTAA

Upstream 100 bases:

>100_bases
ATTATAATTTAATATTATAAGTATTTTTTGTCAAAAATATAAAAAGTATTTTATATGTTTTATTATTTTTAATTTATCTA
ATTAAAAAACGGAGTTTCAA

Downstream 100 bases:

>100_bases
TAAAATATTTAAATATAAAAAATATTTTAAGGAGATGTTATTTAATTTTTATTTTTTATTTTTTTCGGAGAGAGAGAGAT
TCGAACTCTCGGATGATTGC

Product: outer membrane protein A precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MKKQALTIIFLLVSLVTGIQAKENDHWYLGTKMGWSDFNILEYRSKDITPFDTKIDTKNPLGAPVFGLFLGYEFNPYFSF
EIENDTTGFSPHLIFQKNEQNIQINSLQLATKLSYPITDDFHIYTQLGGMMFWDNLSFKKDLQNIFTEKSRLIPNVSLGA
EYIFNKKFITRLDYTWKSNIAKIMNLSMKPVLGDVALSFGWKFGKSNINEIFSSYIPQSSDKQYVALNENINFPFNSTEL
KPISHDKLQKLQKEIKNIKSKNIFIMLSGHADRIGNKEYNQKLSENRAYSIKNYFTSHGISQDKISIQGMGNEFSLTNQI
CKDVSDRPLLISCLAPDRRVEIEVLSD

Sequences:

>Translated_347_residues
MKKQALTIIFLLVSLVTGIQAKENDHWYLGTKMGWSDFNILEYRSKDITPFDTKIDTKNPLGAPVFGLFLGYEFNPYFSF
EIENDTTGFSPHLIFQKNEQNIQINSLQLATKLSYPITDDFHIYTQLGGMMFWDNLSFKKDLQNIFTEKSRLIPNVSLGA
EYIFNKKFITRLDYTWKSNIAKIMNLSMKPVLGDVALSFGWKFGKSNINEIFSSYIPQSSDKQYVALNENINFPFNSTEL
KPISHDKLQKLQKEIKNIKSKNIFIMLSGHADRIGNKEYNQKLSENRAYSIKNYFTSHGISQDKISIQGMGNEFSLTNQI
CKDVSDRPLLISCLAPDRRVEIEVLSD
>Mature_347_residues
MKKQALTIIFLLVSLVTGIQAKENDHWYLGTKMGWSDFNILEYRSKDITPFDTKIDTKNPLGAPVFGLFLGYEFNPYFSF
EIENDTTGFSPHLIFQKNEQNIQINSLQLATKLSYPITDDFHIYTQLGGMMFWDNLSFKKDLQNIFTEKSRLIPNVSLGA
EYIFNKKFITRLDYTWKSNIAKIMNLSMKPVLGDVALSFGWKFGKSNINEIFSSYIPQSSDKQYVALNENINFPFNSTEL
KPISHDKLQKLQKEIKNIKSKNIFIMLSGHADRIGNKEYNQKLSENRAYSIKNYFTSHGISQDKISIQGMGNEFSLTNQI
CKDVSDRPLLISCLAPDRRVEIEVLSD

Specific function: Acts as a porin with low permeability that allows slow penetration of small solutes

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain

Homologues:

Organism=Escherichia coli, GI1787191, Length=350, Percent_Identity=35.4285714285714, Blast_Score=208, Evalue=3e-55,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): OMPA_BUCAP (Q8K9L4)

Other databases:

- EMBL:   AE013218
- RefSeq:   NP_660663.1
- ProteinModelPortal:   Q8K9L4
- EnsemblBacteria:   EBBUCT00000000014
- GeneID:   1005525
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg320
- GeneTree:   EBGT00050000008190
- HOGENOM:   HBG741096
- OMA:   ADYLIAK
- ProtClustDB:   CLSK315890
- BioCyc:   BAPH198804:BUSG320-MONOMER
- InterPro:   IPR011250
- InterPro:   IPR006664
- InterPro:   IPR002368
- InterPro:   IPR006690
- InterPro:   IPR000498
- InterPro:   IPR006665
- Gene3D:   G3DSA:2.40.160.20
- Gene3D:   G3DSA:3.30.1330.60
- PRINTS:   PR01021
- PRINTS:   PR01022

Pfam domain/function: PF00691 OmpA; PF01389 OmpA_membrane; SSF103088 OmpA/MotB_C

EC number: NA

Molecular weight: Translated: 39950; Mature: 39950

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: PS01068 OMPA_1; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xbe7d9d0)-; HASH(0xc65a7f4)-; HASH(0xb8822f4)-; HASH(0xc6b8210)-; HASH(0xbceeb40)-; HASH(0xc59c734)-; HASH(0x958e9b8)-; HASH(0xc5a0e24)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQALTIIFLLVSLVTGIQAKENDHWYLGTKMGWSDFNILEYRSKDITPFDTKIDTKNP
CCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCC
LGAPVFGLFLGYEFNPYFSFEIENDTTGFSPHLIFQKNEQNIQINSLQLATKLSYPITDD
CCCCHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEECCCCEEEEEEEEEEEECCCCCCC
FHIYTQLGGMMFWDNLSFKKDLQNIFTEKSRLIPNVSLGAEYIFNKKFITRLDYTWKSNI
EEEEEHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHEECCHHHHHH
AKIMNLSMKPVLGDVALSFGWKFGKSNINEIFSSYIPQSSDKQYVALNENINFPFNSTEL
HHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCC
KPISHDKLQKLQKEIKNIKSKNIFIMLSGHADRIGNKEYNQKLSENRAYSIKNYFTSHGI
CCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCEEHHHHHHHCCC
SQDKISIQGMGNEFSLTNQICKDVSDRPLLISCLAPDRRVEIEVLSD
CCCEEEEEECCCCCHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECH
>Mature Secondary Structure
MKKQALTIIFLLVSLVTGIQAKENDHWYLGTKMGWSDFNILEYRSKDITPFDTKIDTKNP
CCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCC
LGAPVFGLFLGYEFNPYFSFEIENDTTGFSPHLIFQKNEQNIQINSLQLATKLSYPITDD
CCCCHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEECCCCEEEEEEEEEEEECCCCCCC
FHIYTQLGGMMFWDNLSFKKDLQNIFTEKSRLIPNVSLGAEYIFNKKFITRLDYTWKSNI
EEEEEHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHEECCHHHHHH
AKIMNLSMKPVLGDVALSFGWKFGKSNINEIFSSYIPQSSDKQYVALNENINFPFNSTEL
HHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCC
KPISHDKLQKLQKEIKNIKSKNIFIMLSGHADRIGNKEYNQKLSENRAYSIKNYFTSHGI
CCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCEEHHHHHHHCCC
SQDKISIQGMGNEFSLTNQICKDVSDRPLLISCLAPDRRVEIEVLSD
CCCEEEEEECCCCCHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12089438