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The map label for this gene is yfjF [C]

Identifier: 21672525

GI number: 21672525

Start: 281392

End: 281679

Strand: Reverse

Name: yfjF [C]

Synonym: BUsg244

Alternate gene names: 21672525

Gene position: 281679-281392 (Counterclockwise)

Preceding gene: 21672528

Following gene: 21672520

Centisome position: 43.91

GC content: 20.83

Gene sequence:

>288_bases
ATGAATATTATTAAAGTTAAGGTAGTTTATGCCTTACCAGATATTCAATATATTAAAGAAGTTCATATTGATTCCAATTC
AACTGTAAAAGATGCTATATTAGCTTCAAATTTACTTAATACAGTAAAAAATATTCAATTTTATAAAAATAATGTAGGAA
TTTATAATAAGTTAGTACATTTAAATGAAAATGTAAAAAATGGAGATCGAATTGAAATTTATAGGAATTTAATAATCGAT
CCCAAAGAACGAAGAAGAAAAAGATCAAATATTTGTTTAAAAAAATAA

Upstream 100 bases:

>100_bases
CTTATATTTAAATATTTTTTAAAAAATTTTACTTATATATATTGATTTATTTTTAAAAGTTTGTTAGAAAGAGTTTATTA
AAAAATAAATTTAAGAAATT

Downstream 100 bases:

>100_bases
AAAATTAATTATTTTTTCTTTTTGAAACAATAACCATAGCAGGGCGCAATAAACGAGCTTTATGAAGCATATAACCAGAT
TGCATAACATCTACTACATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MNIIKVKVVYALPDIQYIKEVHIDSNSTVKDAILASNLLNTVKNIQFYKNNVGIYNKLVHLNENVKNGDRIEIYRNLIID
PKERRRKRSNICLKK

Sequences:

>Translated_95_residues
MNIIKVKVVYALPDIQYIKEVHIDSNSTVKDAILASNLLNTVKNIQFYKNNVGIYNKLVHLNENVKNGDRIEIYRNLIID
PKERRRKRSNICLKK
>Mature_95_residues
MNIIKVKVVYALPDIQYIKEVHIDSNSTVKDAILASNLLNTVKNIQFYKNNVGIYNKLVHLNENVKNGDRIEIYRNLIID
PKERRRKRSNICLKK

Specific function: Unknown

COG id: COG2914

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0125 (rnfH) family

Homologues:

Organism=Escherichia coli, GI87082139, Length=87, Percent_Identity=49.4252873563218, Blast_Score=92, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y244_BUCAP (Q8K9R6)

Other databases:

- EMBL:   AE013218
- RefSeq:   NP_660592.1
- ProteinModelPortal:   Q8K9R6
- SMR:   Q8K9R6
- EnsemblBacteria:   EBBUCT00000000009
- GeneID:   1005445
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg244
- GeneTree:   EBGT00050000007778
- HOGENOM:   HBG700644
- OMA:   TITIVYF
- ProtClustDB:   CLSK315825
- BioCyc:   BAPH198804:BUSG244-MONOMER
- HAMAP:   MF_00460
- InterPro:   IPR005346

Pfam domain/function: PF03658 UPF0125

EC number: NA

Molecular weight: Translated: 11137; Mature: 11137

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIIKVKVVYALPDIQYIKEVHIDSNSTVKDAILASNLLNTVKNIQFYKNNVGIYNKLVH
CCEEEEEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCHHHHEEE
LNENVKNGDRIEIYRNLIIDPKERRRKRSNICLKK
CCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MNIIKVKVVYALPDIQYIKEVHIDSNSTVKDAILASNLLNTVKNIQFYKNNVGIYNKLVH
CCEEEEEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCHHHHEEE
LNENVKNGDRIEIYRNLIIDPKERRRKRSNICLKK
CCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12089438