| Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
|---|---|
| Accession | NC_004061 |
| Length | 641,454 |
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The map label for this gene is gloB
Identifier: 21672519
GI number: 21672519
Start: 277295
End: 278047
Strand: Reverse
Name: gloB
Synonym: BUsg238
Alternate gene names: 21672519
Gene position: 278047-277295 (Counterclockwise)
Preceding gene: 21672520
Following gene: 21672518
Centisome position: 43.35
GC content: 24.3
Gene sequence:
>753_bases ATGATTTTAACAAGTATTTCTGTATTAAAAGATAATTACGTTTGGATTCTATACAACGATAATTGTTCTTGTATAATTAT TGATCCTGGTGTTTCAGAAGATATAATAAAAAAAATAGAAAAAAAAAATTGGAAACTAATAGCAATTTTATTAACTCATA ATCATATTGATCATGTAGGAGGAGTAGAAGAAATTATAAGAAGATATCCAAACGTAACTGTTTTTGGTCCTGAAGAAACA AAAACAAGAAATGTAAATAAAATTGTAAAACAAGGAGATGTAATAAAATTGTTAAAAAGTGAAATTCATGTTTTTCTTAC ACCAGGTCATACGTTAGGACATGTTTCATATTATTTAAAACCATATATTTTTTGCGGAGATACTTTATTTTCAGGAGGTT GCGGTCGTGTTTTTAAAAATAAATTTTTTGATATGTATCAATCTATTAATTTTATAAAATCATTACCAAAAAAAACAATT TTATGTTGTTCTCATGAATATACTCTATCTAATTTAAATTTCGCTATGTCTATTCTCCCATTTGATAAAAAAATAAAAAA ATACTATAAGAAAATAAAAAAGCATATTTCTCAGAATAAGACAAGTCTTCCAGTTTCTCTTGAAACTGAAAAAAAAATAA ATATTTTTTTAAGAACAAATGAGAAGACAATTAAAAAAGCAATGGGGTTAAAAAAAGACACGAGCAGCTTTGAGGTTTTT ATTTTACTAAGGAAAGAGAAAGATGATTTTTAA
Upstream 100 bases:
>100_bases CACGTCAATCTGCTCAAAGTCCTTCAGTTAAAGATTTTTTTTATGAAAATAACTTTTATCAAAACAAAAATTTATAAAAT TTTTTTTAATGGAATTAAAC
Downstream 100 bases:
>100_bases TTGGAGCTAAGCGGGATTGAACCGCTGACCTCCTGCGTGCAAGGCAGGCGCTCTCCCAGCTGAGCTATAGCCCCCAGATA ATGTTTACTATGGTAGGCCT
Product: hydroxyacylglutathione hydrolase
Products: NA
Alternate protein names: Glyoxalase II; Glx II
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MILTSISVLKDNYVWILYNDNCSCIIIDPGVSEDIIKKIEKKNWKLIAILLTHNHIDHVGGVEEIIRRYPNVTVFGPEET KTRNVNKIVKQGDVIKLLKSEIHVFLTPGHTLGHVSYYLKPYIFCGDTLFSGGCGRVFKNKFFDMYQSINFIKSLPKKTI LCCSHEYTLSNLNFAMSILPFDKKIKKYYKKIKKHISQNKTSLPVSLETEKKINIFLRTNEKTIKKAMGLKKDTSSFEVF ILLRKEKDDF
Sequences:
>Translated_250_residues MILTSISVLKDNYVWILYNDNCSCIIIDPGVSEDIIKKIEKKNWKLIAILLTHNHIDHVGGVEEIIRRYPNVTVFGPEET KTRNVNKIVKQGDVIKLLKSEIHVFLTPGHTLGHVSYYLKPYIFCGDTLFSGGCGRVFKNKFFDMYQSINFIKSLPKKTI LCCSHEYTLSNLNFAMSILPFDKKIKKYYKKIKKHISQNKTSLPVSLETEKKINIFLRTNEKTIKKAMGLKKDTSSFEVF ILLRKEKDDF >Mature_250_residues MILTSISVLKDNYVWILYNDNCSCIIIDPGVSEDIIKKIEKKNWKLIAILLTHNHIDHVGGVEEIIRRYPNVTVFGPEET KTRNVNKIVKQGDVIKLLKSEIHVFLTPGHTLGHVSYYLKPYIFCGDTLFSGGCGRVFKNKFFDMYQSINFIKSLPKKTI LCCSHEYTLSNLNFAMSILPFDKKIKKYYKKIKKHISQNKTSLPVSLETEKKINIFLRTNEKTIKKAMGLKKDTSSFEVF ILLRKEKDDF
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family
Homologues:
Organism=Homo sapiens, GI14150041, Length=237, Percent_Identity=31.2236286919831, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI116642887, Length=257, Percent_Identity=31.1284046692607, Blast_Score=137, Evalue=9e-33, Organism=Homo sapiens, GI21703352, Length=257, Percent_Identity=31.1284046692607, Blast_Score=137, Evalue=1e-32, Organism=Homo sapiens, GI94538322, Length=259, Percent_Identity=28.957528957529, Blast_Score=134, Evalue=7e-32, Organism=Homo sapiens, GI94538320, Length=259, Percent_Identity=28.957528957529, Blast_Score=134, Evalue=8e-32, Organism=Homo sapiens, GI46361987, Length=189, Percent_Identity=32.2751322751323, Blast_Score=123, Evalue=1e-28, Organism=Escherichia coli, GI1786406, Length=254, Percent_Identity=46.4566929133858, Blast_Score=249, Evalue=1e-67, Organism=Escherichia coli, GI1787158, Length=151, Percent_Identity=31.1258278145695, Blast_Score=75, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17536925, Length=232, Percent_Identity=31.8965517241379, Blast_Score=132, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6320478, Length=241, Percent_Identity=28.6307053941909, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6324614, Length=259, Percent_Identity=26.6409266409266, Blast_Score=72, Evalue=1e-13, Organism=Drosophila melanogaster, GI21356335, Length=255, Percent_Identity=31.3725490196078, Blast_Score=145, Evalue=3e-35, Organism=Drosophila melanogaster, GI24667703, Length=255, Percent_Identity=31.3725490196078, Blast_Score=144, Evalue=4e-35, Organism=Drosophila melanogaster, GI24667711, Length=255, Percent_Identity=31.3725490196078, Blast_Score=144, Evalue=4e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLO2_BUCAP (Q08889)
Other databases:
- EMBL: L18927 - EMBL: AE013218 - PIR: I40592 - RefSeq: NP_660586.1 - ProteinModelPortal: Q08889 - SMR: Q08889 - EnsemblBacteria: EBBUCT00000000200 - GeneID: 1005439 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg238 - GeneTree: EBGT00050000008018 - HOGENOM: HBG753931 - OMA: WCAHEYT - ProtClustDB: CLSK315822 - BioCyc: BAPH198804:BUSG238-MONOMER - HAMAP: MF_01374 - InterPro: IPR001279 - InterPro: IPR017782 - SMART: SM00849 - TIGRFAMs: TIGR03413
Pfam domain/function: PF00753 Lactamase_B
EC number: =3.1.2.6
Molecular weight: Translated: 28945; Mature: 28945
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILTSISVLKDNYVWILYNDNCSCIIIDPGVSEDIIKKIEKKNWKLIAILLTHNHIDHVG CEEEEEEEECCCEEEEEECCCCEEEEECCCCCHHHHHHHHCCCCEEEEEEEECCCCHHCC GVEEIIRRYPNVTVFGPEETKTRNVNKIVKQGDVIKLLKSEIHVFLTPGHTLGHVSYYLK CHHHHHHHCCCEEEECCCCCCCCCHHHHHHCCHHHHHHHCCEEEEECCCCHHHHHHHHHC PYIFCGDTLFSGGCGRVFKNKFFDMYQSINFIKSLPKKTILCCSHEYTLSNLNFAMSILP EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEECCCCEEEEECC FDKKIKKYYKKIKKHISQNKTSLPVSLETEKKINIFLRTNEKTIKKAMGLKKDTSSFEVF CHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEEECCHHHHHHHCCCCCCCCCEEEE ILLRKEKDDF EEEECCCCCC >Mature Secondary Structure MILTSISVLKDNYVWILYNDNCSCIIIDPGVSEDIIKKIEKKNWKLIAILLTHNHIDHVG CEEEEEEEECCCEEEEEECCCCEEEEECCCCCHHHHHHHHCCCCEEEEEEEECCCCHHCC GVEEIIRRYPNVTVFGPEETKTRNVNKIVKQGDVIKLLKSEIHVFLTPGHTLGHVSYYLK CHHHHHHHCCCEEEECCCCCCCCCHHHHHHCCHHHHHHHCCEEEEECCCCHHHHHHHHHC PYIFCGDTLFSGGCGRVFKNKFFDMYQSINFIKSLPKKTILCCSHEYTLSNLNFAMSILP EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEECCCCEEEEECC FDKKIKKYYKKIKKHISQNKTSLPVSLETEKKINIFLRTNEKTIKKAMGLKKDTSSFEVF CHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEEECCHHHHHHHCCCCCCCCCEEEE ILLRKEKDDF EEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7507875; 12089438